Experiment: nitrogen source nitrite 0.5mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS19440 and ABZR87_RS19445 overlap by 4 nucleotides ABZR87_RS19445 and ABZR87_RS19450 are separated by 12 nucleotides ABZR87_RS19450 and ABZR87_RS19455 are separated by 263 nucleotides
ABZR87_RS19440: ABZR87_RS19440 - 2OG-Fe(II) oxygenase, at 730,718 to 731,377
_RS19440
ABZR87_RS19445: ABZR87_RS19445 - hypothetical protein, at 731,374 to 732,255
_RS19445
ABZR87_RS19450: ABZR87_RS19450 - hypothetical protein, at 732,268 to 733,860
_RS19450
ABZR87_RS19455: ABZR87_RS19455 - NADPH-dependent 2,4-dienoyl-CoA reductase, at 734,124 to 736,175
_RS19455
Position (kb) 732
733
734 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 731.408 kb on + strand at 731.408 kb on + strand at 731.408 kb on + strand at 731.408 kb on + strand at 731.409 kb on - strand at 731.409 kb on - strand at 731.484 kb on - strand, within ABZR87_RS19445 at 731.510 kb on + strand, within ABZR87_RS19445 at 731.510 kb on + strand, within ABZR87_RS19445 at 731.510 kb on + strand, within ABZR87_RS19445 at 731.510 kb on + strand, within ABZR87_RS19445 at 731.518 kb on + strand, within ABZR87_RS19445 at 731.519 kb on - strand, within ABZR87_RS19445 at 731.519 kb on - strand, within ABZR87_RS19445 at 731.519 kb on - strand, within ABZR87_RS19445 at 731.519 kb on - strand, within ABZR87_RS19445 at 731.606 kb on + strand, within ABZR87_RS19445 at 731.606 kb on + strand, within ABZR87_RS19445 at 731.606 kb on + strand, within ABZR87_RS19445 at 731.655 kb on + strand, within ABZR87_RS19445 at 731.655 kb on + strand, within ABZR87_RS19445 at 731.658 kb on - strand, within ABZR87_RS19445 at 731.658 kb on - strand, within ABZR87_RS19445 at 731.669 kb on + strand, within ABZR87_RS19445 at 731.669 kb on + strand, within ABZR87_RS19445 at 731.675 kb on + strand, within ABZR87_RS19445 at 731.675 kb on + strand, within ABZR87_RS19445 at 731.676 kb on - strand, within ABZR87_RS19445 at 731.676 kb on - strand, within ABZR87_RS19445 at 731.676 kb on - strand, within ABZR87_RS19445 at 731.831 kb on + strand, within ABZR87_RS19445 at 731.832 kb on - strand, within ABZR87_RS19445 at 731.885 kb on + strand, within ABZR87_RS19445 at 731.886 kb on - strand, within ABZR87_RS19445 at 731.886 kb on - strand, within ABZR87_RS19445 at 731.965 kb on + strand, within ABZR87_RS19445 at 731.966 kb on - strand, within ABZR87_RS19445 at 732.156 kb on + strand, within ABZR87_RS19445 at 732.156 kb on + strand, within ABZR87_RS19445 at 732.156 kb on + strand, within ABZR87_RS19445 at 732.157 kb on - strand, within ABZR87_RS19445 at 732.157 kb on - strand, within ABZR87_RS19445 at 732.233 kb on + strand at 732.234 kb on - strand at 732.234 kb on - strand at 732.752 kb on + strand, within ABZR87_RS19450 at 732.752 kb on + strand, within ABZR87_RS19450 at 732.753 kb on - strand, within ABZR87_RS19450 at 732.794 kb on - strand, within ABZR87_RS19450 at 733.565 kb on - strand, within ABZR87_RS19450 at 733.565 kb on - strand, within ABZR87_RS19450 at 733.590 kb on + strand, within ABZR87_RS19450 at 733.590 kb on + strand, within ABZR87_RS19450 at 733.590 kb on + strand, within ABZR87_RS19450 at 733.590 kb on + strand, within ABZR87_RS19450 at 733.590 kb on + strand, within ABZR87_RS19450 at 733.590 kb on + strand, within ABZR87_RS19450 at 733.590 kb on + strand, within ABZR87_RS19450 at 733.590 kb on + strand, within ABZR87_RS19450 at 733.590 kb on + strand, within ABZR87_RS19450 at 733.590 kb on + strand, within ABZR87_RS19450 at 733.590 kb on + strand, within ABZR87_RS19450 at 733.590 kb on + strand, within ABZR87_RS19450 at 733.590 kb on + strand, within ABZR87_RS19450 at 733.590 kb on + strand, within ABZR87_RS19450 at 733.591 kb on - strand, within ABZR87_RS19450 at 733.591 kb on - strand, within ABZR87_RS19450 at 733.591 kb on - strand, within ABZR87_RS19450 at 733.591 kb on - strand, within ABZR87_RS19450 at 733.591 kb on - strand, within ABZR87_RS19450 at 733.591 kb on - strand, within ABZR87_RS19450 at 733.591 kb on - strand, within ABZR87_RS19450 at 733.591 kb on - strand, within ABZR87_RS19450 at 733.591 kb on - strand, within ABZR87_RS19450 at 733.591 kb on - strand, within ABZR87_RS19450 at 733.594 kb on + strand, within ABZR87_RS19450 at 733.595 kb on - strand, within ABZR87_RS19450 at 733.934 kb on + strand at 733.934 kb on + strand at 733.934 kb on + strand at 733.934 kb on + strand at 733.935 kb on - strand at 733.945 kb on - strand at 733.988 kb on + strand at 733.988 kb on + strand at 733.988 kb on + strand at 733.989 kb on - strand at 733.989 kb on - strand at 733.989 kb on - strand at 733.989 kb on - strand at 733.989 kb on - strand at 734.126 kb on - strand at 734.326 kb on + strand at 734.327 kb on - strand at 734.363 kb on - strand, within ABZR87_RS19455 at 734.363 kb on - strand, within ABZR87_RS19455 at 734.701 kb on + strand, within ABZR87_RS19455 at 734.701 kb on + strand, within ABZR87_RS19455 at 734.702 kb on - strand, within ABZR87_RS19455 at 734.782 kb on + strand, within ABZR87_RS19455 at 734.782 kb on + strand, within ABZR87_RS19455
Per-strain Table
Position Strand Gene LocusTag Fraction nitrogen source nitrite 0.5mM remove 731,408 + +0.2 731,408 + -2.2 731,408 + -2.6 731,408 + -1.9 731,409 - +1.3 731,409 - +0.1 731,484 - ABZR87_RS19445 0.12 -0.3 731,510 + ABZR87_RS19445 0.15 +1.1 731,510 + ABZR87_RS19445 0.15 +0.1 731,510 + ABZR87_RS19445 0.15 +0.3 731,510 + ABZR87_RS19445 0.15 -0.4 731,518 + ABZR87_RS19445 0.16 -2.5 731,519 - ABZR87_RS19445 0.16 +0.9 731,519 - ABZR87_RS19445 0.16 -1.1 731,519 - ABZR87_RS19445 0.16 +1.0 731,519 - ABZR87_RS19445 0.16 -0.1 731,606 + ABZR87_RS19445 0.26 -0.2 731,606 + ABZR87_RS19445 0.26 +2.8 731,606 + ABZR87_RS19445 0.26 -0.1 731,655 + ABZR87_RS19445 0.32 +0.6 731,655 + ABZR87_RS19445 0.32 +0.1 731,658 - ABZR87_RS19445 0.32 -0.1 731,658 - ABZR87_RS19445 0.32 +0.3 731,669 + ABZR87_RS19445 0.33 -3.7 731,669 + ABZR87_RS19445 0.33 +0.3 731,675 + ABZR87_RS19445 0.34 -2.3 731,675 + ABZR87_RS19445 0.34 +0.8 731,676 - ABZR87_RS19445 0.34 +1.6 731,676 - ABZR87_RS19445 0.34 +1.1 731,676 - ABZR87_RS19445 0.34 +4.1 731,831 + ABZR87_RS19445 0.52 -1.0 731,832 - ABZR87_RS19445 0.52 +1.4 731,885 + ABZR87_RS19445 0.58 +0.6 731,886 - ABZR87_RS19445 0.58 +0.7 731,886 - ABZR87_RS19445 0.58 +0.6 731,965 + ABZR87_RS19445 0.67 +0.0 731,966 - ABZR87_RS19445 0.67 -1.2 732,156 + ABZR87_RS19445 0.89 +0.4 732,156 + ABZR87_RS19445 0.89 -0.3 732,156 + ABZR87_RS19445 0.89 +0.5 732,157 - ABZR87_RS19445 0.89 -0.3 732,157 - ABZR87_RS19445 0.89 -0.8 732,233 + -0.1 732,234 - +0.6 732,234 - +1.0 732,752 + ABZR87_RS19450 0.30 +1.0 732,752 + ABZR87_RS19450 0.30 +1.3 732,753 - ABZR87_RS19450 0.30 +1.3 732,794 - ABZR87_RS19450 0.33 +0.5 733,565 - ABZR87_RS19450 0.81 -0.6 733,565 - ABZR87_RS19450 0.81 +0.4 733,590 + ABZR87_RS19450 0.83 -0.2 733,590 + ABZR87_RS19450 0.83 +0.8 733,590 + ABZR87_RS19450 0.83 +1.1 733,590 + ABZR87_RS19450 0.83 -3.3 733,590 + ABZR87_RS19450 0.83 +0.4 733,590 + ABZR87_RS19450 0.83 +0.2 733,590 + ABZR87_RS19450 0.83 -0.2 733,590 + ABZR87_RS19450 0.83 +0.7 733,590 + ABZR87_RS19450 0.83 +0.9 733,590 + ABZR87_RS19450 0.83 +1.4 733,590 + ABZR87_RS19450 0.83 +0.8 733,590 + ABZR87_RS19450 0.83 -1.2 733,590 + ABZR87_RS19450 0.83 +0.5 733,590 + ABZR87_RS19450 0.83 +0.8 733,591 - ABZR87_RS19450 0.83 -0.7 733,591 - ABZR87_RS19450 0.83 -0.1 733,591 - ABZR87_RS19450 0.83 +3.2 733,591 - ABZR87_RS19450 0.83 -0.5 733,591 - ABZR87_RS19450 0.83 +0.3 733,591 - ABZR87_RS19450 0.83 +0.2 733,591 - ABZR87_RS19450 0.83 -0.1 733,591 - ABZR87_RS19450 0.83 -0.2 733,591 - ABZR87_RS19450 0.83 +1.0 733,591 - ABZR87_RS19450 0.83 -3.7 733,594 + ABZR87_RS19450 0.83 -1.1 733,595 - ABZR87_RS19450 0.83 +1.2 733,934 + +0.2 733,934 + -0.1 733,934 + -1.4 733,934 + +1.1 733,935 - -3.1 733,945 - +0.2 733,988 + +0.5 733,988 + -2.8 733,988 + +0.2 733,989 - +0.2 733,989 - +1.2 733,989 - -3.3 733,989 - -1.1 733,989 - +0.3 734,126 - +0.0 734,326 + -1.2 734,327 - +0.5 734,363 - ABZR87_RS19455 0.12 +0.1 734,363 - ABZR87_RS19455 0.12 +0.9 734,701 + ABZR87_RS19455 0.28 +0.6 734,701 + ABZR87_RS19455 0.28 -1.1 734,702 - ABZR87_RS19455 0.28 +0.2 734,782 + ABZR87_RS19455 0.32 -2.9 734,782 + ABZR87_RS19455 0.32 -0.4
Or see this region's nucleotide sequence