Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS12895

Experiment: nitrogen source nitrite 0.5mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrogen source nitrite 0.5mM
2,742,631	+		ABZR87_RS12890	0.55	+0.1
2,742,631	+		ABZR87_RS12890	0.55	+1.5
2,742,633	+		ABZR87_RS12890	0.55	-1.2
2,742,633	+		ABZR87_RS12890	0.55	-2.6
2,742,633	+		ABZR87_RS12890	0.55	+0.7
2,742,633	+		ABZR87_RS12890	0.55	-2.8
2,742,633	+		ABZR87_RS12890	0.55	+1.9
2,742,633	+		ABZR87_RS12890	0.55	-3.3
2,742,634	-		ABZR87_RS12890	0.55	+0.7
2,742,634	-		ABZR87_RS12890	0.55	-1.1
2,742,634	-		ABZR87_RS12890	0.55	+0.0
2,742,634	-		ABZR87_RS12890	0.55	+0.2
2,742,634	-		ABZR87_RS12890	0.55	-0.2
2,742,634	-		ABZR87_RS12890	0.55	-0.2
2,742,672	+		ABZR87_RS12890	0.57	+2.7
2,742,672	+		ABZR87_RS12890	0.57	+0.1
2,742,672	+		ABZR87_RS12890	0.57	-1.3
2,742,672	+		ABZR87_RS12890	0.57	-3.3
2,742,672	+		ABZR87_RS12890	0.57	+1.3
2,742,672	+		ABZR87_RS12890	0.57	+0.1
2,742,672	+		ABZR87_RS12890	0.57	+1.0
2,742,672	+		ABZR87_RS12890	0.57	-0.6
2,742,673	-		ABZR87_RS12890	0.57	-2.8
2,742,673	-		ABZR87_RS12890	0.57	+0.3
2,742,673	-		ABZR87_RS12890	0.57	+0.1
2,742,673	-		ABZR87_RS12890	0.57	-0.1
2,742,673	-		ABZR87_RS12890	0.57	-0.2
2,742,673	-		ABZR87_RS12890	0.57	-1.9
2,742,673	-		ABZR87_RS12890	0.57	-0.1
2,742,673	-		ABZR87_RS12890	0.57	-1.5
2,742,673	-		ABZR87_RS12890	0.57	-1.1
2,742,673	-		ABZR87_RS12890	0.57	+2.2
2,742,673	-		ABZR87_RS12890	0.57	+1.3
2,742,673	-		ABZR87_RS12890	0.57	+0.5
2,742,704	-		ABZR87_RS12890	0.59	+0.3
2,742,723	+		ABZR87_RS12890	0.60	+0.2
2,742,923	+		ABZR87_RS12890	0.70	+0.6
2,742,923	+		ABZR87_RS12890	0.70	-0.3
2,742,923	+		ABZR87_RS12890	0.70	-0.0
2,742,923	+		ABZR87_RS12890	0.70	-0.0
2,742,923	+		ABZR87_RS12890	0.70	+1.4
2,742,924	-		ABZR87_RS12890	0.70	-0.3
2,742,924	-		ABZR87_RS12890	0.70	+1.1
2,742,924	-		ABZR87_RS12890	0.70	+1.6
2,742,924	-		ABZR87_RS12890	0.70	-0.1
2,742,924	-		ABZR87_RS12890	0.70	+0.3
2,742,927	+		ABZR87_RS12890	0.70	+0.9
2,742,927	+		ABZR87_RS12890	0.70	+0.5
2,742,927	+		ABZR87_RS12890	0.70	+0.6
2,742,927	+		ABZR87_RS12890	0.70	+1.1
2,742,928	-		ABZR87_RS12890	0.70	-1.2
2,742,928	-		ABZR87_RS12890	0.70	+0.3
2,742,928	-		ABZR87_RS12890	0.70	+4.0
2,742,930	+		ABZR87_RS12890	0.70	+2.7
2,742,931	-		ABZR87_RS12890	0.70	+0.5
2,742,978	+		ABZR87_RS12890	0.73	-0.8
2,742,979	-		ABZR87_RS12890	0.73	-0.2
2,743,200	+		ABZR87_RS12890	0.84	+0.9
2,743,201	-		ABZR87_RS12890	0.84	-2.3
2,743,201	-		ABZR87_RS12890	0.84	-0.2
2,743,218	+		ABZR87_RS12890	0.85	+0.4
2,743,219	-		ABZR87_RS12890	0.85	-1.1
2,743,253	+		ABZR87_RS12890	0.86	+1.7
2,743,254	-		ABZR87_RS12890	0.86	+1.2
2,743,254	-		ABZR87_RS12890	0.86	+0.5
2,743,314	+		ABZR87_RS12890	0.89	+1.0
2,743,314	+		ABZR87_RS12890	0.89	+0.4
2,743,314	+		ABZR87_RS12890	0.89	-2.2
2,743,314	+		ABZR87_RS12890	0.89	-1.9
2,743,315	-		ABZR87_RS12890	0.89	+2.6
2,743,315	-		ABZR87_RS12890	0.89	-0.6
2,743,315	-		ABZR87_RS12890	0.89	+0.3
2,743,315	-		ABZR87_RS12890	0.89	+0.1
2,743,315	-		ABZR87_RS12890	0.89	+0.5
2,743,315	-		ABZR87_RS12890	0.89	+1.4
2,743,315	-		ABZR87_RS12890	0.89	+1.0
2,743,368	+				+0.6
2,743,386	+				+0.5
2,743,386	+				-2.5
2,743,387	-				+2.5
2,743,387	-				-0.8
2,743,544	+				-3.6
2,743,544	+				+0.4
2,743,545	-				-1.7
2,743,602	+				+2.4
2,743,603	-				+0.7
2,743,697	+				+0.1
2,743,698	-				+0.5
2,743,813	+		ABZR87_RS12895	0.17	-3.6
2,743,813	+		ABZR87_RS12895	0.17	+0.3
2,743,814	-		ABZR87_RS12895	0.18	+0.1
2,743,814	-		ABZR87_RS12895	0.18	+0.0
2,743,882	+		ABZR87_RS12895	0.24	-0.3
2,743,883	-		ABZR87_RS12895	0.24	+2.2
2,743,883	-		ABZR87_RS12895	0.24	-1.2
2,743,883	-		ABZR87_RS12895	0.24	-1.0
2,743,883	-		ABZR87_RS12895	0.24	-0.8
2,743,883	-		ABZR87_RS12895	0.24	-0.5
2,743,883	-		ABZR87_RS12895	0.24	+0.7
2,743,999	+		ABZR87_RS12895	0.35	+1.2
2,743,999	+		ABZR87_RS12895	0.35	-0.7
2,743,999	+		ABZR87_RS12895	0.35	+1.2
2,744,000	-		ABZR87_RS12895	0.35	-0.6
2,744,077	+		ABZR87_RS12895	0.43	-1.1
2,744,078	-		ABZR87_RS12895	0.43	-1.0
2,744,078	-		ABZR87_RS12895	0.43	-0.6
2,744,078	-		ABZR87_RS12895	0.43	-1.1
2,744,078	-		ABZR87_RS12895	0.43	-0.7
2,744,078	-		ABZR87_RS12895	0.43	+1.2
2,744,204	-		ABZR87_RS12895	0.55	-1.3
2,744,422	+		ABZR87_RS12895	0.75	-0.5
2,744,422	+		ABZR87_RS12895	0.75	+0.4
2,744,423	-		ABZR87_RS12895	0.75	-0.7
2,744,423	-		ABZR87_RS12895	0.75	-0.3
2,744,423	-		ABZR87_RS12895	0.75	+0.5
2,744,423	-		ABZR87_RS12895	0.75	-0.4
2,744,423	-		ABZR87_RS12895	0.75	-0.1
2,744,582	+				+0.7
2,744,582	+				-2.5
2,744,583	-				+0.7
2,744,583	-				+0.3
2,744,591	+				+2.9
2,744,591	+				-0.5
2,744,591	+				+0.5
2,744,591	+				-1.3
2,744,592	-				-0.8
2,744,592	-				-0.7
2,744,592	-				+0.2
2,744,642	+				-0.5
2,744,662	-				+0.4
2,744,755	+				-0.1
2,744,756	-				-0.6
2,744,756	-				-0.3
2,744,799	+				-3.2
2,744,927	+				+0.1
2,744,927	+				+1.4
2,744,927	+				+0.5
2,744,928	-				-0.7
2,744,928	-				+0.1
2,744,928	-				+0.8
2,744,928	-				-2.4
2,744,928	-				+0.5
2,744,928	-				-0.7
2,744,928	-				-1.2
2,744,956	+				+0.2
2,744,957	-				-0.5
2,745,010	+		ABZR87_RS12900	0.13	+0.0
2,745,010	+		ABZR87_RS12900	0.13	+0.1
2,745,010	+		ABZR87_RS12900	0.13	-0.2
2,745,010	+		ABZR87_RS12900	0.13	-1.5
2,745,011	-		ABZR87_RS12900	0.13	-0.3
2,745,136	-		ABZR87_RS12900	0.23	-0.1
2,745,136	-		ABZR87_RS12900	0.23	-0.0
2,745,202	+		ABZR87_RS12900	0.28	+0.7
2,745,202	+		ABZR87_RS12900	0.28	-1.3
2,745,203	-		ABZR87_RS12900	0.28	-0.1
2,745,203	-		ABZR87_RS12900	0.28	+0.3
2,745,203	-		ABZR87_RS12900	0.28	-2.8
2,745,229	+		ABZR87_RS12900	0.30	+0.2
2,745,229	+		ABZR87_RS12900	0.30	+0.1
2,745,229	+		ABZR87_RS12900	0.30	-1.1
2,745,230	-		ABZR87_RS12900	0.30	+1.9
2,745,230	-		ABZR87_RS12900	0.30	+1.2
2,745,230	-		ABZR87_RS12900	0.30	+0.9
2,745,230	-		ABZR87_RS12900	0.30	-0.0
2,745,324	+		ABZR87_RS12900	0.37	-0.8
2,745,325	-		ABZR87_RS12900	0.37	+1.1
2,745,337	+		ABZR87_RS12900	0.38	-3.6
2,745,406	+		ABZR87_RS12900	0.43	-0.9
2,745,406	+		ABZR87_RS12900	0.43	+1.0
2,745,406	+		ABZR87_RS12900	0.43	+0.1
2,745,406	+		ABZR87_RS12900	0.43	-1.1
2,745,407	-		ABZR87_RS12900	0.43	-0.4
2,745,407	-		ABZR87_RS12900	0.43	-0.7
2,745,407	-		ABZR87_RS12900	0.43	-3.7
2,745,409	-		ABZR87_RS12900	0.43	-0.4
2,745,460	+		ABZR87_RS12900	0.47	+1.6
2,745,461	-		ABZR87_RS12900	0.47	-2.2
2,745,526	+		ABZR87_RS12900	0.52	-0.4
2,745,526	+		ABZR87_RS12900	0.52	+0.8
2,745,527	-		ABZR87_RS12900	0.52	+1.5
2,745,527	-		ABZR87_RS12900	0.52	-0.8
2,745,527	-		ABZR87_RS12900	0.52	-0.1
2,745,634	+		ABZR87_RS12900	0.60	+0.8
2,745,634	+		ABZR87_RS12900	0.60	+0.0
2,745,634	+		ABZR87_RS12900	0.60	-1.0
2,745,635	-		ABZR87_RS12900	0.60	-0.0
2,745,635	-		ABZR87_RS12900	0.60	-0.3
2,745,635	-		ABZR87_RS12900	0.60	+0.4
2,745,635	-		ABZR87_RS12900	0.60	+0.1