Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS08005

Experiment: nitrogen source nitrite 5mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrogen source nitrite 5mM
1,699,691	+		ABZR87_RS07995	0.72	+0.8
1,699,691	+		ABZR87_RS07995	0.72	+0.7
1,699,692	-		ABZR87_RS07995	0.72	-0.6
1,699,692	-		ABZR87_RS07995	0.72	+0.2
1,699,695	+		ABZR87_RS07995	0.72	-1.1
1,699,695	+		ABZR87_RS07995	0.72	+2.0
1,699,696	-		ABZR87_RS07995	0.73	+0.3
1,699,696	-		ABZR87_RS07995	0.73	-0.1
1,699,696	-		ABZR87_RS07995	0.73	+0.8
1,699,696	-		ABZR87_RS07995	0.73	-0.4
1,699,780	+		ABZR87_RS07995	0.89	-1.2
1,699,780	+		ABZR87_RS07995	0.89	-0.3
1,699,780	+		ABZR87_RS07995	0.89	-1.0
1,699,781	-		ABZR87_RS07995	0.89	-0.4
1,699,816	-				-0.0
1,699,836	+				-0.4
1,699,836	+				+0.7
1,699,836	+				+0.8
1,699,837	-				-0.5
1,699,837	-				+0.2
1,699,865	+				-0.3
1,699,865	+				-0.1
1,699,866	-				-0.7
1,699,866	-				+0.4
1,699,979	+				-0.3
1,699,979	+				-1.0
1,699,979	+				-2.0
1,699,988	+				-1.2
1,699,988	+				+0.2
1,699,989	-				-0.5
1,700,046	+				-0.7
1,700,046	+				-0.9
1,700,063	+				+0.0
1,700,063	+				-2.2
1,700,064	-				-1.1
1,700,064	-				-1.0
1,700,064	-				-2.0
1,700,187	-		ABZR87_RS08000	0.19	+2.7
1,700,202	+		ABZR87_RS08000	0.22	-0.3
1,700,203	-		ABZR87_RS08000	0.22	-0.1
1,700,203	-		ABZR87_RS08000	0.22	+0.2
1,700,211	+		ABZR87_RS08000	0.24	-1.6
1,700,211	+		ABZR87_RS08000	0.24	+0.6
1,700,211	+		ABZR87_RS08000	0.24	+0.4
1,700,211	+		ABZR87_RS08000	0.24	-0.6
1,700,211	+		ABZR87_RS08000	0.24	+0.2
1,700,212	-		ABZR87_RS08000	0.24	-1.0
1,700,212	-		ABZR87_RS08000	0.24	-0.3
1,700,212	-		ABZR87_RS08000	0.24	-1.5
1,700,336	+		ABZR87_RS08000	0.49	+0.5
1,700,336	+		ABZR87_RS08000	0.49	-1.2
1,700,337	-		ABZR87_RS08000	0.49	+0.8
1,700,337	-		ABZR87_RS08000	0.49	+1.5
1,700,337	-		ABZR87_RS08000	0.49	-0.0
1,700,367	-		ABZR87_RS08000	0.55	+0.0
1,700,367	-		ABZR87_RS08000	0.55	-0.5
1,700,391	+		ABZR87_RS08000	0.60	+0.9
1,700,391	+		ABZR87_RS08000	0.60	-0.1
1,700,391	+		ABZR87_RS08000	0.60	+0.7
1,700,391	+		ABZR87_RS08000	0.60	-0.2
1,700,391	+		ABZR87_RS08000	0.60	+0.1
1,700,391	+		ABZR87_RS08000	0.60	-2.3
1,700,392	-		ABZR87_RS08000	0.60	-0.1
1,700,392	-		ABZR87_RS08000	0.60	-0.5
1,700,392	-		ABZR87_RS08000	0.60	+0.9
1,700,392	-		ABZR87_RS08000	0.60	-1.5
1,700,392	-		ABZR87_RS08000	0.60	+1.1
1,700,392	-		ABZR87_RS08000	0.60	-0.8
1,700,392	-		ABZR87_RS08000	0.60	-0.0
1,700,392	-		ABZR87_RS08000	0.60	+0.1
1,700,462	+		ABZR87_RS08000	0.74	-0.5
1,700,462	+		ABZR87_RS08000	0.74	-0.6
1,700,462	+		ABZR87_RS08000	0.74	-2.6
1,700,463	-		ABZR87_RS08000	0.74	-1.3
1,700,463	-		ABZR87_RS08000	0.74	-1.0
1,700,463	-		ABZR87_RS08000	0.74	-3.4
1,700,463	-		ABZR87_RS08000	0.74	-1.4
1,700,463	-		ABZR87_RS08000	0.74	-1.2
1,700,544	+				-0.3
1,700,571	+				+1.1
1,700,571	+				+0.7
1,700,571	+				-3.4
1,700,571	+				-0.7
1,700,572	-				+1.2
1,700,572	-				-1.4
1,700,597	+				+0.0
1,700,597	+				+2.1
1,700,597	+				+3.4
1,700,598	-				-0.2
1,700,598	-				-0.7
1,700,598	-				-0.9
1,700,598	-				-0.5
1,700,599	+				+0.4
1,700,599	+				+1.5
1,700,599	+				-0.2
1,700,599	+				+0.4
1,700,599	+				+0.5
1,700,599	+				-0.5
1,700,599	+				-0.8
1,700,600	-				-0.1
1,700,600	-				+1.0
1,700,600	-				+0.2
1,700,600	-				-1.0
1,700,600	-				-0.7
1,700,600	-				-2.0
1,700,604	+				-0.7
1,700,604	+				+0.1
1,700,604	+				-0.1
1,700,604	+				+0.2
1,700,604	+				-0.4
1,700,604	+				+0.4
1,700,604	+				+3.5
1,700,604	+				+0.3
1,700,605	-				-0.4
1,700,605	-				-0.4
1,700,605	-				-0.2
1,700,605	-				-0.4
1,700,605	-				-0.7
1,700,605	-				+0.9
1,700,609	+				-0.5
1,700,610	-				+0.5
1,700,659	+				+1.1
1,700,659	+				+0.4
1,700,660	-				-0.0
1,700,660	-				-0.2
1,700,660	-				+0.2
1,700,660	-				+0.5
1,700,693	+				+0.7
1,700,694	-				+0.7
1,700,694	-				-0.7
1,700,739	-				+0.5
1,700,739	-				+0.1
1,700,755	+				-0.9
1,700,755	+				-1.4
1,700,755	+				-1.1
1,700,755	+				-0.1
1,700,755	+				+0.7
1,700,755	+				+0.2
1,700,756	-				+0.0
1,700,756	-				+0.2
1,700,756	-				-0.8
1,700,756	-				+0.3
1,700,773	+				+0.9
1,700,773	+				+0.7
1,700,773	+				-1.3
1,700,773	+				-1.6
1,700,773	+				+1.2
1,700,774	-				+1.4
1,700,774	-				+0.7
1,700,849	+		ABZR87_RS08005	0.10	-0.8
1,700,849	+		ABZR87_RS08005	0.10	-0.4
1,700,849	+		ABZR87_RS08005	0.10	+1.0
1,700,849	+		ABZR87_RS08005	0.10	+1.2
1,700,850	-		ABZR87_RS08005	0.11	+0.6
1,700,850	-		ABZR87_RS08005	0.11	+0.8
1,700,850	-		ABZR87_RS08005	0.11	+0.3
1,700,850	-		ABZR87_RS08005	0.11	-2.1
1,700,898	+		ABZR87_RS08005	0.13	+0.3
1,700,898	+		ABZR87_RS08005	0.13	+0.3
1,700,899	-		ABZR87_RS08005	0.13	-1.2
1,700,899	-		ABZR87_RS08005	0.13	+3.3
1,700,899	-		ABZR87_RS08005	0.13	-1.7
1,700,899	-		ABZR87_RS08005	0.13	-1.4
1,700,899	-		ABZR87_RS08005	0.13	+0.2
1,700,899	-		ABZR87_RS08005	0.13	-0.2
1,700,938	+		ABZR87_RS08005	0.16	-0.9
1,700,938	+		ABZR87_RS08005	0.16	+1.2
1,700,938	+		ABZR87_RS08005	0.16	-1.2
1,700,938	+		ABZR87_RS08005	0.16	-0.1
1,700,939	-		ABZR87_RS08005	0.16	-0.1
1,700,953	-		ABZR87_RS08005	0.17	+0.3
1,700,963	+		ABZR87_RS08005	0.17	+0.3
1,700,963	+		ABZR87_RS08005	0.17	-0.9
1,700,964	-		ABZR87_RS08005	0.17	+0.3
1,700,964	-		ABZR87_RS08005	0.17	-0.9
1,701,023	+		ABZR87_RS08005	0.21	-0.1
1,701,024	-		ABZR87_RS08005	0.21	+0.0
1,701,047	+		ABZR87_RS08005	0.22	-1.2
1,701,048	-		ABZR87_RS08005	0.22	+0.2
1,701,048	-		ABZR87_RS08005	0.22	-0.2
1,701,060	-		ABZR87_RS08005	0.23	-0.1
1,701,135	+		ABZR87_RS08005	0.27	+1.4
1,701,135	+		ABZR87_RS08005	0.27	-0.9
1,701,135	+		ABZR87_RS08005	0.27	-2.1
1,701,136	-		ABZR87_RS08005	0.27	+1.0
1,701,136	-		ABZR87_RS08005	0.27	-0.1
1,701,136	-		ABZR87_RS08005	0.27	-2.2
1,701,136	-		ABZR87_RS08005	0.27	+0.3
1,701,136	-		ABZR87_RS08005	0.27	+0.3
1,701,143	+		ABZR87_RS08005	0.28	-1.2
1,701,144	-		ABZR87_RS08005	0.28	-0.5
1,701,193	+		ABZR87_RS08005	0.30	+0.3
1,701,193	+		ABZR87_RS08005	0.30	-1.2
1,701,223	+		ABZR87_RS08005	0.32	+0.0
1,701,223	+		ABZR87_RS08005	0.32	-2.2
1,701,223	+		ABZR87_RS08005	0.32	+0.1
1,701,224	-		ABZR87_RS08005	0.32	-0.7
1,701,245	+		ABZR87_RS08005	0.33	+0.0
1,701,245	+		ABZR87_RS08005	0.33	-0.1
1,701,246	-		ABZR87_RS08005	0.34	+0.3
1,701,246	-		ABZR87_RS08005	0.34	+1.4
1,701,246	-		ABZR87_RS08005	0.34	+0.8
1,701,246	-		ABZR87_RS08005	0.34	-1.4
1,701,246	-		ABZR87_RS08005	0.34	-1.1
1,701,260	+		ABZR87_RS08005	0.34	-0.1
1,701,260	+		ABZR87_RS08005	0.34	+1.1
1,701,279	-		ABZR87_RS08005	0.35	-0.6
1,701,312	+		ABZR87_RS08005	0.37	-0.1
1,701,327	+		ABZR87_RS08005	0.38	-0.5
1,701,327	+		ABZR87_RS08005	0.38	-0.2
1,701,328	-		ABZR87_RS08005	0.38	-0.8
1,701,328	-		ABZR87_RS08005	0.38	-1.2
1,701,356	+		ABZR87_RS08005	0.40	+1.3
1,701,357	-		ABZR87_RS08005	0.40	+0.8
1,701,357	-		ABZR87_RS08005	0.40	+0.5
1,701,396	+		ABZR87_RS08005	0.42	+0.2
1,701,413	+		ABZR87_RS08005	0.43	-0.6
1,701,454	+		ABZR87_RS08005	0.46	+0.2
1,701,454	+		ABZR87_RS08005	0.46	-1.5
1,701,455	-		ABZR87_RS08005	0.46	+2.4
1,701,455	-		ABZR87_RS08005	0.46	-0.5
1,701,455	-		ABZR87_RS08005	0.46	+0.6
1,701,476	+		ABZR87_RS08005	0.47	+0.2
1,701,476	+		ABZR87_RS08005	0.47	+0.5
1,701,477	-		ABZR87_RS08005	0.47	-0.3
1,701,477	-		ABZR87_RS08005	0.47	-1.3
1,701,555	+		ABZR87_RS08005	0.51	-0.0
1,701,555	+		ABZR87_RS08005	0.51	+0.2
1,701,555	+		ABZR87_RS08005	0.51	+0.7
1,701,555	+		ABZR87_RS08005	0.51	-0.3
1,701,555	+		ABZR87_RS08005	0.51	+0.6
1,701,555	+		ABZR87_RS08005	0.51	+0.1
1,701,556	-		ABZR87_RS08005	0.51	+1.1
1,701,556	-		ABZR87_RS08005	0.51	-0.2
1,701,556	-		ABZR87_RS08005	0.51	+0.3
1,701,556	-		ABZR87_RS08005	0.51	+0.4
1,701,556	-		ABZR87_RS08005	0.51	+0.1
1,701,556	-		ABZR87_RS08005	0.51	+0.5
1,701,556	-		ABZR87_RS08005	0.51	-0.4
1,701,556	-		ABZR87_RS08005	0.51	+1.5
1,701,578	+		ABZR87_RS08005	0.53	+2.9
1,701,578	+		ABZR87_RS08005	0.53	-0.2
1,701,578	+		ABZR87_RS08005	0.53	-1.1
1,701,579	-		ABZR87_RS08005	0.53	+0.1
1,701,598	+		ABZR87_RS08005	0.54	+1.5
1,701,599	-		ABZR87_RS08005	0.54	+0.2
1,701,599	-		ABZR87_RS08005	0.54	-0.8
1,701,610	-		ABZR87_RS08005	0.55	-0.2
1,701,613	+		ABZR87_RS08005	0.55	-0.2
1,701,613	+		ABZR87_RS08005	0.55	+0.3
1,701,613	+		ABZR87_RS08005	0.55	+0.1
1,701,613	+		ABZR87_RS08005	0.55	+0.7
1,701,614	-		ABZR87_RS08005	0.55	+0.9
1,701,614	-		ABZR87_RS08005	0.55	+0.3
1,701,677	-		ABZR87_RS08005	0.58	+0.1
1,701,683	+		ABZR87_RS08005	0.59	+0.3
1,701,683	+		ABZR87_RS08005	0.59	-0.7
1,701,684	-		ABZR87_RS08005	0.59	+0.2
1,701,696	+		ABZR87_RS08005	0.60	+0.6
1,701,696	+		ABZR87_RS08005	0.60	-0.1
1,701,697	-		ABZR87_RS08005	0.60	-0.3
1,701,697	-		ABZR87_RS08005	0.60	-0.7
1,701,697	-		ABZR87_RS08005	0.60	-0.3
1,701,710	+		ABZR87_RS08005	0.60	+0.9
1,701,710	+		ABZR87_RS08005	0.60	+0.8
1,701,710	+		ABZR87_RS08005	0.60	-0.4
1,701,710	+		ABZR87_RS08005	0.60	+0.4
1,701,711	-		ABZR87_RS08005	0.60	-1.1
1,701,711	-		ABZR87_RS08005	0.60	+1.4
1,701,711	-		ABZR87_RS08005	0.60	+0.9
1,701,716	+		ABZR87_RS08005	0.61	-1.0
1,701,716	+		ABZR87_RS08005	0.61	+0.2
1,701,717	-		ABZR87_RS08005	0.61	-0.2
1,701,717	-		ABZR87_RS08005	0.61	+1.3
1,701,717	-		ABZR87_RS08005	0.61	-0.3
1,701,717	-		ABZR87_RS08005	0.61	-0.1
1,701,717	-		ABZR87_RS08005	0.61	-1.2
1,701,752	+		ABZR87_RS08005	0.63	+0.6
1,701,752	+		ABZR87_RS08005	0.63	-0.1
1,701,753	-		ABZR87_RS08005	0.63	+0.4
1,701,753	-		ABZR87_RS08005	0.63	-1.8
1,701,787	+		ABZR87_RS08005	0.65	+1.0
1,701,788	-		ABZR87_RS08005	0.65	-0.2
1,701,788	-		ABZR87_RS08005	0.65	+0.3
1,701,829	+		ABZR87_RS08005	0.67	+0.2
1,701,830	-		ABZR87_RS08005	0.67	-0.2
1,701,842	-		ABZR87_RS08005	0.68	+0.1
1,701,842	-		ABZR87_RS08005	0.68	-0.8
1,701,848	-		ABZR87_RS08005	0.68	+0.2
1,701,848	-		ABZR87_RS08005	0.68	-0.5
1,701,854	+		ABZR87_RS08005	0.69	+0.0
1,701,855	-		ABZR87_RS08005	0.69	+0.1
1,701,872	+		ABZR87_RS08005	0.70	+0.3
1,701,873	-		ABZR87_RS08005	0.70	+0.1
1,701,880	+		ABZR87_RS08005	0.70	-0.5
1,701,915	+		ABZR87_RS08005	0.72	-0.9
1,701,915	+		ABZR87_RS08005	0.72	-1.1
1,701,915	+		ABZR87_RS08005	0.72	+0.9
1,701,916	-		ABZR87_RS08005	0.72	-0.4
1,701,916	-		ABZR87_RS08005	0.72	-0.1
1,701,929	+		ABZR87_RS08005	0.73	-0.9
1,701,929	+		ABZR87_RS08005	0.73	-0.7
1,701,975	+		ABZR87_RS08005	0.76	+0.6
1,701,975	+		ABZR87_RS08005	0.76	-0.2
1,701,975	+		ABZR87_RS08005	0.76	+0.4
1,701,976	-		ABZR87_RS08005	0.76	+0.0
1,701,976	-		ABZR87_RS08005	0.76	+0.2
1,701,976	-		ABZR87_RS08005	0.76	+0.3
1,701,976	-		ABZR87_RS08005	0.76	-0.2
1,701,988	+		ABZR87_RS08005	0.77	-0.1
1,701,988	+		ABZR87_RS08005	0.77	+0.1
1,701,988	+		ABZR87_RS08005	0.77	-1.0
1,701,989	-		ABZR87_RS08005	0.77	+0.6
1,702,009	+		ABZR87_RS08005	0.78	-0.1
1,702,009	+		ABZR87_RS08005	0.78	-0.1
1,702,009	+		ABZR87_RS08005	0.78	+0.4
1,702,009	+		ABZR87_RS08005	0.78	+0.3
1,702,010	-		ABZR87_RS08005	0.78	-0.2
1,702,013	-		ABZR87_RS08005	0.78	+0.8
1,702,048	+		ABZR87_RS08005	0.80	+0.5
1,702,049	-		ABZR87_RS08005	0.80	+0.6
1,702,073	+		ABZR87_RS08005	0.81	-0.2
1,702,074	-		ABZR87_RS08005	0.82	+0.5
1,702,095	+		ABZR87_RS08005	0.83	-0.6
1,702,096	-		ABZR87_RS08005	0.83	-0.1
1,702,104	+		ABZR87_RS08005	0.83	+0.2
1,702,105	-		ABZR87_RS08005	0.83	+0.1
1,702,113	+		ABZR87_RS08005	0.84	-0.2
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