Experiment: RCH2 defined with Zinc 0.016 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_3946 and Pf6N2E2_3947 are separated by 115 nucleotides Pf6N2E2_3947 and Pf6N2E2_3948 are separated by 86 nucleotides
Pf6N2E2_3946 - Thymidylate synthase (EC 2.1.1.45), at 4,583,596 to 4,584,567
_3946
Pf6N2E2_3947 - Cd(II)/Pb(II)-responsive transcriptional regulator, at 4,584,683 to 4,585,129
_3947
Pf6N2E2_3948 - Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4), at 4,585,216 to 4,587,435
_3948
Position (kb)
4584
4585
4586 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 4585.024 kb on - strand, within Pf6N2E2_3947 at 4585.071 kb on + strand, within Pf6N2E2_3947 at 4585.074 kb on + strand, within Pf6N2E2_3947 at 4585.146 kb on + strand at 4585.146 kb on + strand at 4585.146 kb on + strand at 4585.146 kb on + strand at 4585.146 kb on + strand at 4585.146 kb on + strand at 4585.147 kb on - strand at 4585.147 kb on - strand at 4585.147 kb on - strand at 4585.147 kb on - strand at 4585.147 kb on - strand at 4585.147 kb on - strand at 4585.147 kb on - strand at 4585.147 kb on - strand at 4585.180 kb on + strand at 4585.717 kb on + strand, within Pf6N2E2_3948 at 4585.717 kb on + strand, within Pf6N2E2_3948 at 4585.717 kb on + strand, within Pf6N2E2_3948 at 4585.717 kb on + strand, within Pf6N2E2_3948 at 4585.718 kb on - strand, within Pf6N2E2_3948 at 4585.718 kb on - strand, within Pf6N2E2_3948 at 4585.718 kb on - strand, within Pf6N2E2_3948 at 4585.718 kb on - strand, within Pf6N2E2_3948 at 4585.718 kb on - strand, within Pf6N2E2_3948 at 4585.718 kb on - strand, within Pf6N2E2_3948 at 4585.970 kb on + strand, within Pf6N2E2_3948 at 4585.970 kb on + strand, within Pf6N2E2_3948 at 4585.971 kb on - strand, within Pf6N2E2_3948 at 4585.971 kb on - strand, within Pf6N2E2_3948 at 4585.971 kb on - strand, within Pf6N2E2_3948
Per-strain Table
Position Strand Gene LocusTag Fraction RCH2 defined with Zinc 0.016 mM remove 4,585,024 - Pf6N2E2_3947 0.76 -0.4 4,585,071 + Pf6N2E2_3947 0.87 -0.8 4,585,074 + Pf6N2E2_3947 0.87 -0.9 4,585,146 + +0.7 4,585,146 + -0.2 4,585,146 + -0.4 4,585,146 + -1.0 4,585,146 + +0.8 4,585,146 + +0.1 4,585,147 - -0.4 4,585,147 - -0.4 4,585,147 - +0.1 4,585,147 - +0.1 4,585,147 - +0.1 4,585,147 - +0.1 4,585,147 - -0.0 4,585,147 - +0.6 4,585,180 + +0.2 4,585,717 + Pf6N2E2_3948 0.23 -1.4 4,585,717 + Pf6N2E2_3948 0.23 -1.6 4,585,717 + Pf6N2E2_3948 0.23 -0.7 4,585,717 + Pf6N2E2_3948 0.23 +0.1 4,585,718 - Pf6N2E2_3948 0.23 -3.2 4,585,718 - Pf6N2E2_3948 0.23 -2.3 4,585,718 - Pf6N2E2_3948 0.23 -1.5 4,585,718 - Pf6N2E2_3948 0.23 -1.1 4,585,718 - Pf6N2E2_3948 0.23 -1.8 4,585,718 - Pf6N2E2_3948 0.23 -1.0 4,585,970 + Pf6N2E2_3948 0.34 -1.4 4,585,970 + Pf6N2E2_3948 0.34 -1.8 4,585,971 - Pf6N2E2_3948 0.34 -1.6 4,585,971 - Pf6N2E2_3948 0.34 -1.9 4,585,971 - Pf6N2E2_3948 0.34 -0.9
Or see this region's nucleotide sequence