Experiment: nitrogen source nitrate 5mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS19605 and ABZR87_RS19610 are separated by 88 nucleotides ABZR87_RS19610 and ABZR87_RS19615 are separated by 17 nucleotides ABZR87_RS19615 and ABZR87_RS19620 are separated by 55 nucleotides
ABZR87_RS19605: ABZR87_RS19605 - cytochrome P450, at 771,395 to 772,528
_RS19605
ABZR87_RS19610: ABZR87_RS19610 - winged helix-turn-helix domain-containing protein, at 772,617 to 773,333
_RS19610
ABZR87_RS19615: ABZR87_RS19615 - spermidine N1-acetyltransferase, at 773,351 to 773,893
_RS19615
ABZR87_RS19620: ABZR87_RS19620 - PepSY-associated TM helix domain-containing protein, at 773,949 to 775,091
_RS19620
Position (kb) 772
773
774 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 771.701 kb on - strand, within ABZR87_RS19605 at 771.867 kb on + strand, within ABZR87_RS19605 at 771.868 kb on - strand, within ABZR87_RS19605 at 772.023 kb on + strand, within ABZR87_RS19605 at 772.024 kb on - strand, within ABZR87_RS19605 at 772.024 kb on - strand, within ABZR87_RS19605 at 772.199 kb on + strand, within ABZR87_RS19605 at 772.199 kb on + strand, within ABZR87_RS19605 at 772.199 kb on + strand, within ABZR87_RS19605 at 772.199 kb on + strand, within ABZR87_RS19605 at 772.200 kb on - strand, within ABZR87_RS19605 at 772.200 kb on - strand, within ABZR87_RS19605 at 772.200 kb on - strand, within ABZR87_RS19605 at 772.200 kb on - strand, within ABZR87_RS19605 at 772.343 kb on + strand, within ABZR87_RS19605 at 772.455 kb on + strand at 772.458 kb on + strand at 772.547 kb on + strand at 772.547 kb on + strand at 772.548 kb on - strand at 772.548 kb on - strand at 772.759 kb on - strand, within ABZR87_RS19610 at 772.848 kb on + strand, within ABZR87_RS19610 at 772.848 kb on + strand, within ABZR87_RS19610 at 772.849 kb on - strand, within ABZR87_RS19610 at 772.849 kb on - strand, within ABZR87_RS19610 at 772.854 kb on + strand, within ABZR87_RS19610 at 772.854 kb on + strand, within ABZR87_RS19610 at 772.854 kb on + strand, within ABZR87_RS19610 at 772.854 kb on + strand, within ABZR87_RS19610 at 772.854 kb on + strand, within ABZR87_RS19610 at 772.854 kb on + strand, within ABZR87_RS19610 at 772.854 kb on + strand, within ABZR87_RS19610 at 772.854 kb on + strand, within ABZR87_RS19610 at 772.854 kb on + strand, within ABZR87_RS19610 at 772.855 kb on - strand, within ABZR87_RS19610 at 772.855 kb on - strand, within ABZR87_RS19610 at 772.855 kb on - strand, within ABZR87_RS19610 at 772.980 kb on + strand, within ABZR87_RS19610 at 772.980 kb on + strand, within ABZR87_RS19610 at 772.980 kb on + strand, within ABZR87_RS19610 at 772.981 kb on - strand, within ABZR87_RS19610 at 772.981 kb on - strand, within ABZR87_RS19610 at 772.981 kb on - strand, within ABZR87_RS19610 at 773.073 kb on + strand, within ABZR87_RS19610 at 773.074 kb on - strand, within ABZR87_RS19610 at 773.160 kb on + strand, within ABZR87_RS19610 at 773.160 kb on + strand, within ABZR87_RS19610 at 773.160 kb on + strand, within ABZR87_RS19610 at 773.160 kb on + strand, within ABZR87_RS19610 at 773.161 kb on - strand, within ABZR87_RS19610 at 773.161 kb on - strand, within ABZR87_RS19610 at 773.303 kb on + strand at 773.331 kb on + strand at 773.379 kb on + strand at 773.379 kb on + strand at 773.380 kb on - strand at 773.380 kb on - strand at 773.380 kb on - strand at 773.418 kb on + strand, within ABZR87_RS19615 at 773.418 kb on + strand, within ABZR87_RS19615 at 773.481 kb on + strand, within ABZR87_RS19615 at 773.482 kb on - strand, within ABZR87_RS19615 at 773.523 kb on + strand, within ABZR87_RS19615 at 773.523 kb on + strand, within ABZR87_RS19615 at 773.523 kb on + strand, within ABZR87_RS19615 at 773.523 kb on + strand, within ABZR87_RS19615 at 773.523 kb on + strand, within ABZR87_RS19615 at 773.523 kb on + strand, within ABZR87_RS19615 at 773.524 kb on - strand, within ABZR87_RS19615 at 773.524 kb on - strand, within ABZR87_RS19615 at 773.556 kb on + strand, within ABZR87_RS19615 at 773.556 kb on + strand, within ABZR87_RS19615 at 773.649 kb on + strand, within ABZR87_RS19615 at 773.649 kb on + strand, within ABZR87_RS19615 at 773.649 kb on + strand, within ABZR87_RS19615 at 773.649 kb on + strand, within ABZR87_RS19615 at 773.650 kb on - strand, within ABZR87_RS19615 at 773.650 kb on - strand, within ABZR87_RS19615 at 773.650 kb on - strand, within ABZR87_RS19615 at 773.650 kb on - strand, within ABZR87_RS19615 at 773.650 kb on - strand, within ABZR87_RS19615 at 773.650 kb on - strand, within ABZR87_RS19615 at 773.650 kb on - strand, within ABZR87_RS19615 at 773.650 kb on - strand, within ABZR87_RS19615 at 773.650 kb on - strand, within ABZR87_RS19615 at 773.650 kb on - strand, within ABZR87_RS19615 at 773.745 kb on + strand, within ABZR87_RS19615 at 773.745 kb on + strand, within ABZR87_RS19615 at 773.745 kb on + strand, within ABZR87_RS19615 at 773.746 kb on - strand, within ABZR87_RS19615 at 773.765 kb on - strand, within ABZR87_RS19615 at 773.765 kb on - strand, within ABZR87_RS19615 at 773.793 kb on + strand, within ABZR87_RS19615 at 773.793 kb on + strand, within ABZR87_RS19615 at 774.017 kb on - strand at 774.072 kb on + strand, within ABZR87_RS19620 at 774.072 kb on + strand, within ABZR87_RS19620 at 774.072 kb on + strand, within ABZR87_RS19620 at 774.073 kb on - strand, within ABZR87_RS19620 at 774.073 kb on - strand, within ABZR87_RS19620 at 774.073 kb on - strand, within ABZR87_RS19620 at 774.097 kb on + strand, within ABZR87_RS19620 at 774.097 kb on + strand, within ABZR87_RS19620 at 774.254 kb on + strand, within ABZR87_RS19620 at 774.284 kb on + strand, within ABZR87_RS19620 at 774.285 kb on - strand, within ABZR87_RS19620 at 774.285 kb on - strand, within ABZR87_RS19620 at 774.304 kb on + strand, within ABZR87_RS19620
Per-strain Table
Position Strand Gene LocusTag Fraction nitrogen source nitrate 5mM remove 771,701 - ABZR87_RS19605 0.27 +0.2 771,867 + ABZR87_RS19605 0.42 -2.0 771,868 - ABZR87_RS19605 0.42 +2.0 772,023 + ABZR87_RS19605 0.55 +0.4 772,024 - ABZR87_RS19605 0.55 +0.1 772,024 - ABZR87_RS19605 0.55 -0.6 772,199 + ABZR87_RS19605 0.71 -0.6 772,199 + ABZR87_RS19605 0.71 -0.4 772,199 + ABZR87_RS19605 0.71 +0.2 772,199 + ABZR87_RS19605 0.71 -1.5 772,200 - ABZR87_RS19605 0.71 -0.5 772,200 - ABZR87_RS19605 0.71 +0.6 772,200 - ABZR87_RS19605 0.71 -2.0 772,200 - ABZR87_RS19605 0.71 +1.0 772,343 + ABZR87_RS19605 0.84 +0.2 772,455 + +0.6 772,458 + -0.2 772,547 + +0.7 772,547 + +1.3 772,548 - -2.2 772,548 - +3.6 772,759 - ABZR87_RS19610 0.20 -0.0 772,848 + ABZR87_RS19610 0.32 +0.2 772,848 + ABZR87_RS19610 0.32 -0.6 772,849 - ABZR87_RS19610 0.32 +1.1 772,849 - ABZR87_RS19610 0.32 +1.5 772,854 + ABZR87_RS19610 0.33 -0.6 772,854 + ABZR87_RS19610 0.33 +0.4 772,854 + ABZR87_RS19610 0.33 +0.9 772,854 + ABZR87_RS19610 0.33 -0.6 772,854 + ABZR87_RS19610 0.33 +2.4 772,854 + ABZR87_RS19610 0.33 -1.0 772,854 + ABZR87_RS19610 0.33 -3.9 772,854 + ABZR87_RS19610 0.33 -0.7 772,854 + ABZR87_RS19610 0.33 +1.6 772,855 - ABZR87_RS19610 0.33 +0.6 772,855 - ABZR87_RS19610 0.33 +0.7 772,855 - ABZR87_RS19610 0.33 +0.4 772,980 + ABZR87_RS19610 0.51 +1.6 772,980 + ABZR87_RS19610 0.51 -0.7 772,980 + ABZR87_RS19610 0.51 +0.8 772,981 - ABZR87_RS19610 0.51 -0.2 772,981 - ABZR87_RS19610 0.51 -1.2 772,981 - ABZR87_RS19610 0.51 -0.7 773,073 + ABZR87_RS19610 0.64 -0.0 773,074 - ABZR87_RS19610 0.64 +0.6 773,160 + ABZR87_RS19610 0.76 -0.3 773,160 + ABZR87_RS19610 0.76 -2.6 773,160 + ABZR87_RS19610 0.76 +1.3 773,160 + ABZR87_RS19610 0.76 +0.9 773,161 - ABZR87_RS19610 0.76 -1.2 773,161 - ABZR87_RS19610 0.76 +0.0 773,303 + -0.1 773,331 + -0.4 773,379 + -0.0 773,379 + +0.1 773,380 - +0.3 773,380 - +0.2 773,380 - -0.2 773,418 + ABZR87_RS19615 0.12 -1.5 773,418 + ABZR87_RS19615 0.12 -1.2 773,481 + ABZR87_RS19615 0.24 -0.4 773,482 - ABZR87_RS19615 0.24 +0.1 773,523 + ABZR87_RS19615 0.32 +0.4 773,523 + ABZR87_RS19615 0.32 -0.6 773,523 + ABZR87_RS19615 0.32 -0.0 773,523 + ABZR87_RS19615 0.32 +0.1 773,523 + ABZR87_RS19615 0.32 +2.3 773,523 + ABZR87_RS19615 0.32 +0.0 773,524 - ABZR87_RS19615 0.32 -2.6 773,524 - ABZR87_RS19615 0.32 +2.1 773,556 + ABZR87_RS19615 0.38 -0.9 773,556 + ABZR87_RS19615 0.38 -1.5 773,649 + ABZR87_RS19615 0.55 -0.3 773,649 + ABZR87_RS19615 0.55 +0.2 773,649 + ABZR87_RS19615 0.55 +1.1 773,649 + ABZR87_RS19615 0.55 -0.6 773,650 - ABZR87_RS19615 0.55 +0.8 773,650 - ABZR87_RS19615 0.55 +0.1 773,650 - ABZR87_RS19615 0.55 +0.2 773,650 - ABZR87_RS19615 0.55 -0.7 773,650 - ABZR87_RS19615 0.55 +0.8 773,650 - ABZR87_RS19615 0.55 +0.8 773,650 - ABZR87_RS19615 0.55 -1.0 773,650 - ABZR87_RS19615 0.55 -0.2 773,650 - ABZR87_RS19615 0.55 -2.5 773,650 - ABZR87_RS19615 0.55 -2.4 773,745 + ABZR87_RS19615 0.73 +0.9 773,745 + ABZR87_RS19615 0.73 +2.4 773,745 + ABZR87_RS19615 0.73 -3.7 773,746 - ABZR87_RS19615 0.73 -1.6 773,765 - ABZR87_RS19615 0.76 -0.0 773,765 - ABZR87_RS19615 0.76 -0.5 773,793 + ABZR87_RS19615 0.81 -0.3 773,793 + ABZR87_RS19615 0.81 +1.3 774,017 - -1.3 774,072 + ABZR87_RS19620 0.11 +0.6 774,072 + ABZR87_RS19620 0.11 -0.4 774,072 + ABZR87_RS19620 0.11 +0.6 774,073 - ABZR87_RS19620 0.11 +1.6 774,073 - ABZR87_RS19620 0.11 -0.8 774,073 - ABZR87_RS19620 0.11 -0.2 774,097 + ABZR87_RS19620 0.13 +0.3 774,097 + ABZR87_RS19620 0.13 -0.7 774,254 + ABZR87_RS19620 0.27 +1.2 774,284 + ABZR87_RS19620 0.29 +0.7 774,285 - ABZR87_RS19620 0.29 +0.8 774,285 - ABZR87_RS19620 0.29 -0.6 774,304 + ABZR87_RS19620 0.31 -0.7
Or see this region's nucleotide sequence