Experiment: nitrogen source nitrate 5mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS18675 and ABZR87_RS18680 overlap by 4 nucleotides ABZR87_RS18680 and ABZR87_RS18685 overlap by 4 nucleotides ABZR87_RS18685 and ABZR87_RS18690 are separated by 61 nucleotides
ABZR87_RS18675: ABZR87_RS18675 - HAD family phosphatase, at 543,131 to 543,847
_RS18675
ABZR87_RS18680: ABZR87_RS18680 - carbohydrate ABC transporter permease, at 543,844 to 544,665
_RS18680
ABZR87_RS18685: ABZR87_RS18685 - sugar ABC transporter permease, at 544,662 to 545,582
_RS18685
ABZR87_RS18690: ABZR87_RS18690 - sugar ABC transporter substrate-binding protein, at 545,644 to 546,849
_RS18690
Position (kb) 544
545
546 Strain fitness (log2 ratio) -1
0
1
2
3 at 543.717 kb on - strand, within ABZR87_RS18675 at 543.717 kb on - strand, within ABZR87_RS18675 at 543.825 kb on + strand at 543.977 kb on + strand, within ABZR87_RS18680 at 544.115 kb on + strand, within ABZR87_RS18680 at 544.115 kb on + strand, within ABZR87_RS18680 at 544.190 kb on + strand, within ABZR87_RS18680 at 544.191 kb on - strand, within ABZR87_RS18680 at 544.191 kb on - strand, within ABZR87_RS18680 at 544.191 kb on - strand, within ABZR87_RS18680 at 544.292 kb on + strand, within ABZR87_RS18680 at 544.293 kb on - strand, within ABZR87_RS18680 at 544.536 kb on + strand, within ABZR87_RS18680 at 544.537 kb on - strand, within ABZR87_RS18680 at 544.537 kb on - strand, within ABZR87_RS18680 at 544.538 kb on + strand, within ABZR87_RS18680 at 544.538 kb on + strand, within ABZR87_RS18680 at 544.538 kb on + strand, within ABZR87_RS18680 at 544.538 kb on + strand, within ABZR87_RS18680 at 544.539 kb on - strand, within ABZR87_RS18680 at 544.539 kb on - strand, within ABZR87_RS18680 at 544.539 kb on - strand, within ABZR87_RS18680 at 544.539 kb on - strand, within ABZR87_RS18680 at 544.539 kb on - strand, within ABZR87_RS18680 at 544.807 kb on + strand, within ABZR87_RS18685 at 544.808 kb on - strand, within ABZR87_RS18685 at 545.153 kb on - strand, within ABZR87_RS18685 at 545.153 kb on - strand, within ABZR87_RS18685 at 545.366 kb on - strand, within ABZR87_RS18685 at 545.381 kb on - strand, within ABZR87_RS18685 at 545.428 kb on + strand, within ABZR87_RS18685 at 545.429 kb on - strand, within ABZR87_RS18685 at 545.446 kb on + strand, within ABZR87_RS18685 at 545.447 kb on - strand, within ABZR87_RS18685 at 545.447 kb on - strand, within ABZR87_RS18685 at 545.551 kb on - strand at 545.551 kb on - strand at 545.604 kb on + strand at 545.604 kb on + strand at 545.604 kb on + strand at 545.604 kb on + strand at 545.604 kb on + strand at 545.604 kb on + strand at 545.604 kb on + strand at 545.604 kb on + strand at 545.605 kb on - strand at 545.605 kb on - strand at 545.605 kb on - strand at 545.605 kb on - strand at 545.605 kb on - strand at 545.605 kb on - strand at 545.605 kb on - strand at 545.605 kb on - strand at 545.605 kb on - strand at 545.605 kb on - strand at 545.605 kb on - strand at 545.605 kb on - strand at 545.810 kb on + strand, within ABZR87_RS18690 at 545.820 kb on + strand, within ABZR87_RS18690 at 545.912 kb on + strand, within ABZR87_RS18690 at 545.912 kb on + strand, within ABZR87_RS18690 at 545.913 kb on - strand, within ABZR87_RS18690 at 545.913 kb on - strand, within ABZR87_RS18690 at 545.913 kb on - strand, within ABZR87_RS18690 at 545.978 kb on + strand, within ABZR87_RS18690 at 545.978 kb on + strand, within ABZR87_RS18690 at 545.978 kb on + strand, within ABZR87_RS18690 at 545.978 kb on + strand, within ABZR87_RS18690 at 545.978 kb on + strand, within ABZR87_RS18690 at 545.978 kb on + strand, within ABZR87_RS18690 at 545.979 kb on - strand, within ABZR87_RS18690 at 545.979 kb on - strand, within ABZR87_RS18690 at 545.979 kb on - strand, within ABZR87_RS18690 at 545.979 kb on - strand, within ABZR87_RS18690 at 545.979 kb on - strand, within ABZR87_RS18690 at 546.257 kb on + strand, within ABZR87_RS18690 at 546.257 kb on + strand, within ABZR87_RS18690 at 546.258 kb on - strand, within ABZR87_RS18690 at 546.278 kb on + strand, within ABZR87_RS18690 at 546.278 kb on + strand, within ABZR87_RS18690 at 546.278 kb on + strand, within ABZR87_RS18690 at 546.278 kb on + strand, within ABZR87_RS18690 at 546.278 kb on + strand, within ABZR87_RS18690 at 546.278 kb on + strand, within ABZR87_RS18690 at 546.278 kb on + strand, within ABZR87_RS18690 at 546.279 kb on - strand, within ABZR87_RS18690 at 546.279 kb on - strand, within ABZR87_RS18690 at 546.279 kb on - strand, within ABZR87_RS18690 at 546.279 kb on - strand, within ABZR87_RS18690 at 546.279 kb on - strand, within ABZR87_RS18690 at 546.425 kb on + strand, within ABZR87_RS18690 at 546.426 kb on - strand, within ABZR87_RS18690 at 546.479 kb on + strand, within ABZR87_RS18690 at 546.479 kb on + strand, within ABZR87_RS18690 at 546.480 kb on - strand, within ABZR87_RS18690 at 546.480 kb on - strand, within ABZR87_RS18690 at 546.480 kb on - strand, within ABZR87_RS18690 at 546.480 kb on - strand, within ABZR87_RS18690 at 546.480 kb on - strand, within ABZR87_RS18690 at 546.536 kb on + strand, within ABZR87_RS18690 at 546.536 kb on + strand, within ABZR87_RS18690 at 546.536 kb on + strand, within ABZR87_RS18690 at 546.536 kb on + strand, within ABZR87_RS18690 at 546.536 kb on + strand, within ABZR87_RS18690 at 546.537 kb on - strand, within ABZR87_RS18690 at 546.537 kb on - strand, within ABZR87_RS18690 at 546.537 kb on - strand, within ABZR87_RS18690 at 546.537 kb on - strand, within ABZR87_RS18690 at 546.537 kb on - strand, within ABZR87_RS18690 at 546.537 kb on - strand, within ABZR87_RS18690 at 546.537 kb on - strand, within ABZR87_RS18690 at 546.557 kb on + strand, within ABZR87_RS18690 at 546.557 kb on + strand, within ABZR87_RS18690 at 546.558 kb on - strand, within ABZR87_RS18690 at 546.558 kb on - strand, within ABZR87_RS18690 at 546.558 kb on - strand, within ABZR87_RS18690
Per-strain Table
Position Strand Gene LocusTag Fraction nitrogen source nitrate 5mM remove 543,717 - ABZR87_RS18675 0.82 +0.3 543,717 - ABZR87_RS18675 0.82 +0.0 543,825 + -0.8 543,977 + ABZR87_RS18680 0.16 +1.5 544,115 + ABZR87_RS18680 0.33 +0.8 544,115 + ABZR87_RS18680 0.33 +1.0 544,190 + ABZR87_RS18680 0.42 -1.2 544,191 - ABZR87_RS18680 0.42 -0.9 544,191 - ABZR87_RS18680 0.42 -1.3 544,191 - ABZR87_RS18680 0.42 +0.7 544,292 + ABZR87_RS18680 0.55 -0.9 544,293 - ABZR87_RS18680 0.55 -0.3 544,536 + ABZR87_RS18680 0.84 +1.2 544,537 - ABZR87_RS18680 0.84 +0.4 544,537 - ABZR87_RS18680 0.84 -0.9 544,538 + ABZR87_RS18680 0.84 -0.2 544,538 + ABZR87_RS18680 0.84 +0.2 544,538 + ABZR87_RS18680 0.84 +0.5 544,538 + ABZR87_RS18680 0.84 -0.1 544,539 - ABZR87_RS18680 0.85 +0.3 544,539 - ABZR87_RS18680 0.85 +0.6 544,539 - ABZR87_RS18680 0.85 -0.0 544,539 - ABZR87_RS18680 0.85 -0.4 544,539 - ABZR87_RS18680 0.85 +0.8 544,807 + ABZR87_RS18685 0.16 +1.5 544,808 - ABZR87_RS18685 0.16 +1.8 545,153 - ABZR87_RS18685 0.53 -0.1 545,153 - ABZR87_RS18685 0.53 -0.9 545,366 - ABZR87_RS18685 0.76 +0.9 545,381 - ABZR87_RS18685 0.78 +0.1 545,428 + ABZR87_RS18685 0.83 -0.6 545,429 - ABZR87_RS18685 0.83 +1.4 545,446 + ABZR87_RS18685 0.85 -0.7 545,447 - ABZR87_RS18685 0.85 +1.3 545,447 - ABZR87_RS18685 0.85 +0.5 545,551 - +0.5 545,551 - -0.9 545,604 + +0.1 545,604 + -0.0 545,604 + +0.5 545,604 + -1.0 545,604 + +1.0 545,604 + -0.5 545,604 + +0.6 545,604 + -0.2 545,605 - +1.3 545,605 - +0.8 545,605 - -0.3 545,605 - +1.0 545,605 - +0.6 545,605 - +0.1 545,605 - +0.8 545,605 - +0.1 545,605 - +0.9 545,605 - -1.6 545,605 - +0.3 545,605 - +1.1 545,810 + ABZR87_RS18690 0.14 +1.2 545,820 + ABZR87_RS18690 0.15 -1.7 545,912 + ABZR87_RS18690 0.22 -1.0 545,912 + ABZR87_RS18690 0.22 +0.2 545,913 - ABZR87_RS18690 0.22 -0.1 545,913 - ABZR87_RS18690 0.22 +0.1 545,913 - ABZR87_RS18690 0.22 -0.5 545,978 + ABZR87_RS18690 0.28 -1.2 545,978 + ABZR87_RS18690 0.28 +0.0 545,978 + ABZR87_RS18690 0.28 +1.6 545,978 + ABZR87_RS18690 0.28 -0.1 545,978 + ABZR87_RS18690 0.28 -0.3 545,978 + ABZR87_RS18690 0.28 -0.5 545,979 - ABZR87_RS18690 0.28 +1.4 545,979 - ABZR87_RS18690 0.28 -0.5 545,979 - ABZR87_RS18690 0.28 -0.0 545,979 - ABZR87_RS18690 0.28 -1.0 545,979 - ABZR87_RS18690 0.28 +2.0 546,257 + ABZR87_RS18690 0.51 -1.4 546,257 + ABZR87_RS18690 0.51 -0.1 546,258 - ABZR87_RS18690 0.51 -0.1 546,278 + ABZR87_RS18690 0.53 +0.6 546,278 + ABZR87_RS18690 0.53 +0.3 546,278 + ABZR87_RS18690 0.53 +0.0 546,278 + ABZR87_RS18690 0.53 +0.0 546,278 + ABZR87_RS18690 0.53 +0.6 546,278 + ABZR87_RS18690 0.53 -0.9 546,278 + ABZR87_RS18690 0.53 -1.0 546,279 - ABZR87_RS18690 0.53 +2.0 546,279 - ABZR87_RS18690 0.53 -0.6 546,279 - ABZR87_RS18690 0.53 +0.2 546,279 - ABZR87_RS18690 0.53 -0.4 546,279 - ABZR87_RS18690 0.53 +0.3 546,425 + ABZR87_RS18690 0.65 +0.7 546,426 - ABZR87_RS18690 0.65 +0.3 546,479 + ABZR87_RS18690 0.69 -0.4 546,479 + ABZR87_RS18690 0.69 -1.1 546,480 - ABZR87_RS18690 0.69 +0.7 546,480 - ABZR87_RS18690 0.69 -1.1 546,480 - ABZR87_RS18690 0.69 -0.1 546,480 - ABZR87_RS18690 0.69 +1.3 546,480 - ABZR87_RS18690 0.69 +1.1 546,536 + ABZR87_RS18690 0.74 +3.6 546,536 + ABZR87_RS18690 0.74 +0.3 546,536 + ABZR87_RS18690 0.74 +0.1 546,536 + ABZR87_RS18690 0.74 -0.1 546,536 + ABZR87_RS18690 0.74 -0.4 546,537 - ABZR87_RS18690 0.74 +1.3 546,537 - ABZR87_RS18690 0.74 +0.6 546,537 - ABZR87_RS18690 0.74 +0.6 546,537 - ABZR87_RS18690 0.74 +2.1 546,537 - ABZR87_RS18690 0.74 +0.8 546,537 - ABZR87_RS18690 0.74 -0.4 546,537 - ABZR87_RS18690 0.74 +0.2 546,557 + ABZR87_RS18690 0.76 +0.3 546,557 + ABZR87_RS18690 0.76 +1.0 546,558 - ABZR87_RS18690 0.76 -0.7 546,558 - ABZR87_RS18690 0.76 -0.8 546,558 - ABZR87_RS18690 0.76 -0.2
Or see this region's nucleotide sequence