Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4290

Experiment: RCH2_defined

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2_defined
5,000,416	+		Pf6N2E2_4289	0.84	-0.3
5,000,416	+		Pf6N2E2_4289	0.84	-0.1
5,000,416	+		Pf6N2E2_4289	0.84	-0.1
5,000,416	+		Pf6N2E2_4289	0.84	-0.0
5,000,542	+		Pf6N2E2_4289	0.87	+1.8
5,000,542	+		Pf6N2E2_4289	0.87	+0.6
5,000,543	-		Pf6N2E2_4289	0.87	+1.2
5,000,543	-		Pf6N2E2_4289	0.87	+0.1
5,000,543	-		Pf6N2E2_4289	0.87	-0.6
5,000,557	+		Pf6N2E2_4289	0.87	+0.8
5,000,557	+		Pf6N2E2_4289	0.87	+0.6
5,000,557	+		Pf6N2E2_4289	0.87	+0.5
5,000,558	-		Pf6N2E2_4289	0.87	-0.2
5,000,728	+				+0.8
5,000,728	+				-0.4
5,000,869	-				+0.1
5,000,869	-				+0.6
5,000,884	+				+0.5
5,000,884	+				-0.9
5,000,884	+				-1.0
5,000,884	+				-0.1
5,000,885	-				+0.3
5,000,885	-				+0.6
5,000,885	-				-2.4
5,000,885	-				-0.5
5,000,885	-				-0.2
5,000,993	+				-0.4
5,000,993	+				+0.0
5,000,993	+				-1.4
5,000,993	+				+0.9
5,000,993	+				+0.6
5,000,994	-				+0.2
5,001,022	+				-0.8
5,001,023	-				-0.7
5,001,023	-				-0.4
5,001,088	-				+0.3
5,001,137	+				-1.7
5,001,180	+				+0.1
5,001,180	+				-0.4
5,001,180	+				-0.3
5,001,181	-				-0.6
5,001,181	-				+1.0
5,001,181	-				-0.7
5,001,181	-				-0.5
5,001,181	-				-0.4
5,001,222	+				-0.5
5,001,223	-				+0.1
5,001,249	+				+0.2
5,001,249	+				-1.2
5,001,249	+				-0.7
5,001,250	-				-0.6
5,001,250	-				+1.4
5,001,253	+				+0.5
5,001,253	+				-0.3
5,001,253	+				+0.4
5,001,253	+				-0.0
5,001,253	+				-0.1
5,001,253	+				+0.3
5,001,253	+				+0.1
5,001,253	+				-0.3
5,001,253	+				-0.4
5,001,253	+				-0.5
5,001,253	+				+0.4
5,001,253	+				-0.3
5,001,253	+				+0.9
5,001,253	+				+0.5
5,001,253	+				+1.0
5,001,253	+				+0.6
5,001,253	+				+0.2
5,001,253	+				+0.1
5,001,253	+				+0.3
5,001,253	+				-0.2
5,001,253	+				+0.9
5,001,253	+				-0.0
5,001,253	+				+0.1
5,001,253	+				-0.1
5,001,253	+				+0.6
5,001,253	+				-0.4
5,001,253	+				+0.6
5,001,253	+				-0.1
5,001,253	+				+0.6
5,001,254	-				+0.5
5,001,254	-				+0.4
5,001,254	-				+0.2
5,001,254	-				-0.4
5,001,254	-				-0.3
5,001,254	-				+1.2
5,001,254	-				+0.1
5,001,254	-				-0.5
5,001,254	-				+0.2
5,001,254	-				+0.0
5,001,254	-				-0.4
5,001,254	-				+0.9
5,001,254	-				+0.2
5,001,254	-				+0.4
5,001,254	-				-0.7
5,001,254	-				-0.4
5,001,254	-				-0.3
5,001,254	-				+0.6
5,001,254	-				+1.1
5,001,254	-				-0.2
5,001,254	-				-0.6
5,001,254	-				+0.1
5,001,254	-				+0.9
5,001,254	-				+1.2
5,001,254	-				-0.9
5,001,254	-				-0.2
5,001,254	-				-0.1
5,001,254	-				-0.0
5,001,257	+				+0.3
5,001,257	+				-0.3
5,001,257	+				+0.1
5,001,257	+				+0.2
5,001,257	+				+0.9
5,001,257	+				+1.5
5,001,257	+				-0.1
5,001,257	+				-0.0
5,001,257	+				-0.3
5,001,257	+				-1.6
5,001,257	+				+0.8
5,001,257	+				+1.5
5,001,257	+				-0.5
5,001,257	+				+0.0
5,001,257	+				-0.5
5,001,257	+				-0.4
5,001,257	+				-0.7
5,001,257	+				+0.1
5,001,258	-				+0.7
5,001,258	-				+0.6
5,001,258	-				-1.4
5,001,258	-				-0.0
5,001,258	-				+0.7
5,001,258	-				+0.2
5,001,258	-				+0.5
5,001,258	-				+0.6
5,001,258	-				-2.3
5,001,258	-				+0.2
5,001,259	+				+1.8
5,001,260	-				+0.1
5,001,294	+				-0.8
5,001,321	+				-0.6
5,001,322	-				-1.2
5,001,333	+				+2.8
5,001,406	+				-1.2
5,001,406	+				+0.5
5,001,407	-				-1.4
5,001,407	-				+0.1
5,001,407	-				-1.9
5,001,407	-				+0.2
5,001,407	-				+0.2
5,001,407	-				+0.1
5,001,407	-				+0.0
5,001,408	+				-0.8
5,001,408	+				+0.1
5,001,408	+				-1.4
5,001,408	+				-1.0
5,001,408	+				-1.0
5,001,408	+				-1.4
5,001,408	+				-1.0
5,001,409	-				+0.3
5,001,409	-				+0.5
5,001,409	-				-1.4
5,001,409	-				-0.9
5,001,439	-				+0.6
5,001,552	+		Pf6N2E2_4290	0.20	-0.2
5,001,552	+		Pf6N2E2_4290	0.20	-0.2
5,001,552	+		Pf6N2E2_4290	0.20	-0.5
5,001,552	+		Pf6N2E2_4290	0.20	+0.4
5,001,552	+		Pf6N2E2_4290	0.20	-0.3
5,001,553	-		Pf6N2E2_4290	0.20	-1.7
5,001,553	-		Pf6N2E2_4290	0.20	+0.3
5,001,553	-		Pf6N2E2_4290	0.20	-0.7
5,001,553	-		Pf6N2E2_4290	0.20	-0.1
5,001,553	-		Pf6N2E2_4290	0.20	-0.1
5,001,553	-		Pf6N2E2_4290	0.20	+0.4
5,001,553	-		Pf6N2E2_4290	0.20	+0.7
5,001,567	+		Pf6N2E2_4290	0.21	+0.0
5,001,568	-		Pf6N2E2_4290	0.21	+0.1
5,001,759	+		Pf6N2E2_4290	0.39	-0.2
5,001,759	+		Pf6N2E2_4290	0.39	-0.1
5,001,759	+		Pf6N2E2_4290	0.39	+0.1
5,001,760	-		Pf6N2E2_4290	0.39	-0.3
5,001,760	-		Pf6N2E2_4290	0.39	+0.2
5,001,760	-		Pf6N2E2_4290	0.39	-0.3
5,001,760	-		Pf6N2E2_4290	0.39	-0.2
5,001,777	+		Pf6N2E2_4290	0.40	+0.0
5,001,777	+		Pf6N2E2_4290	0.40	-0.2
5,001,778	-		Pf6N2E2_4290	0.41	+0.1
5,001,778	-		Pf6N2E2_4290	0.41	-0.7
5,001,778	-		Pf6N2E2_4290	0.41	+0.9
5,001,825	+		Pf6N2E2_4290	0.45	+1.0
5,001,826	-		Pf6N2E2_4290	0.45	-0.1
5,002,038	+		Pf6N2E2_4290	0.64	+0.1
5,002,038	+		Pf6N2E2_4290	0.64	+0.8
5,002,038	+		Pf6N2E2_4290	0.64	+0.6
5,002,038	+		Pf6N2E2_4290	0.64	+0.7
5,002,038	+		Pf6N2E2_4290	0.64	-0.9
5,002,039	-		Pf6N2E2_4290	0.64	-0.1
5,002,039	-		Pf6N2E2_4290	0.64	-0.0
5,002,039	-		Pf6N2E2_4290	0.64	-0.4
5,002,039	-		Pf6N2E2_4290	0.64	+1.4
5,002,039	-		Pf6N2E2_4290	0.64	+0.5
5,002,039	-		Pf6N2E2_4290	0.64	-0.7
5,002,039	-		Pf6N2E2_4290	0.64	+0.4
5,002,039	-		Pf6N2E2_4290	0.64	+0.7
5,002,039	-		Pf6N2E2_4290	0.64	-0.5
5,002,044	+		Pf6N2E2_4290	0.65	-1.5
5,002,044	+		Pf6N2E2_4290	0.65	-0.2
5,002,044	+		Pf6N2E2_4290	0.65	+0.3
5,002,045	-		Pf6N2E2_4290	0.65	+0.0
5,002,045	-		Pf6N2E2_4290	0.65	+0.8
5,002,045	-		Pf6N2E2_4290	0.65	+0.2
5,002,267	-		Pf6N2E2_4290	0.85	-1.3
5,002,326	+				+1.0
5,002,326	+				+0.1
5,002,326	+				+0.2
5,002,326	+				-0.3
5,002,327	-				-1.1
5,002,327	-				-0.4
5,002,327	-				+0.2
5,002,327	-				-0.4
5,002,327	-				+1.6
5,002,341	+				+0.2
5,002,341	+				+0.1
5,002,341	+				-0.7
5,002,342	-				-0.2
5,002,412	-				-0.2
5,002,412	-				+0.2
5,002,736	+		Pf6N2E2_4291	0.28	-0.4
5,002,736	+		Pf6N2E2_4291	0.28	-0.0
5,002,736	+		Pf6N2E2_4291	0.28	-0.2
5,002,737	-		Pf6N2E2_4291	0.28	+0.6
5,002,737	-		Pf6N2E2_4291	0.28	+0.0
5,002,856	+		Pf6N2E2_4291	0.40	-0.7
5,002,856	+		Pf6N2E2_4291	0.40	-0.4
5,002,856	+		Pf6N2E2_4291	0.40	+0.3
5,002,856	+		Pf6N2E2_4291	0.40	+1.1
5,002,856	+		Pf6N2E2_4291	0.40	-0.7
5,002,890	-		Pf6N2E2_4291	0.43	+0.1
5,002,890	-		Pf6N2E2_4291	0.43	+0.1
5,002,967	+		Pf6N2E2_4291	0.51	+0.1
5,002,968	-		Pf6N2E2_4291	0.51	+0.4
5,002,968	-		Pf6N2E2_4291	0.51	+1.2
5,002,968	-		Pf6N2E2_4291	0.51	+0.7
5,002,974	-		Pf6N2E2_4291	0.51	+1.2
5,003,091	-		Pf6N2E2_4291	0.63	+0.2
5,003,091	-		Pf6N2E2_4291	0.63	-0.7
5,003,141	+		Pf6N2E2_4291	0.68	-0.6
5,003,141	+		Pf6N2E2_4291	0.68	-0.0
5,003,141	+		Pf6N2E2_4291	0.68	-0.3
5,003,141	+		Pf6N2E2_4291	0.68	+0.8
5,003,142	-		Pf6N2E2_4291	0.68	-0.1
5,003,142	-		Pf6N2E2_4291	0.68	+0.1
5,003,142	-		Pf6N2E2_4291	0.68	-0.7
5,003,142	-		Pf6N2E2_4291	0.68	-0.2
5,003,142	-		Pf6N2E2_4291	0.68	-1.2
5,003,142	-		Pf6N2E2_4291	0.68	+0.9
5,003,142	-		Pf6N2E2_4291	0.68	+0.4
5,003,234	+		Pf6N2E2_4291	0.77	-0.2
5,003,235	-		Pf6N2E2_4291	0.77	-0.7
5,003,235	-		Pf6N2E2_4291	0.77	+1.2