Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4001

Experiment: RCH2_defined

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2_defined
4,670,568	+		Pf6N2E2_3999	0.81	-0.1
4,670,568	+		Pf6N2E2_3999	0.81	-0.1
4,670,568	+		Pf6N2E2_3999	0.81	-0.6
4,670,568	+		Pf6N2E2_3999	0.81	+0.2
4,670,569	-		Pf6N2E2_3999	0.81	-0.5
4,670,569	-		Pf6N2E2_3999	0.81	+0.3
4,670,655	+		Pf6N2E2_3999	0.85	+0.1
4,670,655	+		Pf6N2E2_3999	0.85	-1.3
4,670,655	+		Pf6N2E2_3999	0.85	+0.2
4,670,656	-		Pf6N2E2_3999	0.85	+0.4
4,670,656	-		Pf6N2E2_3999	0.85	-0.1
4,670,656	-		Pf6N2E2_3999	0.85	+0.7
4,670,656	-		Pf6N2E2_3999	0.85	-0.6
4,670,694	+		Pf6N2E2_3999	0.87	-1.2
4,670,694	+		Pf6N2E2_3999	0.87	+1.0
4,670,694	+		Pf6N2E2_3999	0.87	+0.3
4,670,695	-		Pf6N2E2_3999	0.87	+0.3
4,670,835	+				+0.5
4,670,850	+				+0.1
4,670,850	+				-0.4
4,670,983	+				+0.4
4,671,027	-				+0.5
4,671,080	+		Pf6N2E2_4000	0.18	-0.1
4,671,128	+		Pf6N2E2_4000	0.28	+0.1
4,671,128	+		Pf6N2E2_4000	0.28	+1.0
4,671,128	+		Pf6N2E2_4000	0.28	-0.6
4,671,128	+		Pf6N2E2_4000	0.28	-0.2
4,671,128	+		Pf6N2E2_4000	0.28	+0.9
4,671,129	-		Pf6N2E2_4000	0.28	-0.8
4,671,129	-		Pf6N2E2_4000	0.28	+1.2
4,671,129	-		Pf6N2E2_4000	0.28	-0.7
4,671,129	-		Pf6N2E2_4000	0.28	+1.5
4,671,129	-		Pf6N2E2_4000	0.28	+0.4
4,671,129	-		Pf6N2E2_4000	0.28	+0.1
4,671,167	+		Pf6N2E2_4000	0.35	+0.9
4,671,167	+		Pf6N2E2_4000	0.35	-0.5
4,671,167	+		Pf6N2E2_4000	0.35	+1.2
4,671,168	-		Pf6N2E2_4000	0.36	+0.4
4,671,168	-		Pf6N2E2_4000	0.36	+0.6
4,671,168	-		Pf6N2E2_4000	0.36	+0.5
4,671,182	+		Pf6N2E2_4000	0.38	-0.7
4,671,182	+		Pf6N2E2_4000	0.38	+0.7
4,671,183	-		Pf6N2E2_4000	0.39	-0.1
4,671,183	-		Pf6N2E2_4000	0.39	+0.2
4,671,329	+		Pf6N2E2_4000	0.67	+0.6
4,671,345	+		Pf6N2E2_4000	0.70	+0.2
4,671,345	+		Pf6N2E2_4000	0.70	+0.9
4,671,345	+		Pf6N2E2_4000	0.70	-1.6
4,671,345	+		Pf6N2E2_4000	0.70	-0.7
4,671,345	+		Pf6N2E2_4000	0.70	-0.7
4,671,346	-		Pf6N2E2_4000	0.71	+0.1
4,671,346	-		Pf6N2E2_4000	0.71	+1.2
4,671,346	-		Pf6N2E2_4000	0.71	+0.5
4,671,346	-		Pf6N2E2_4000	0.71	-0.7
4,671,346	-		Pf6N2E2_4000	0.71	+0.1
4,671,346	-		Pf6N2E2_4000	0.71	+0.8
4,671,469	+				+0.9
4,671,469	+				+0.9
4,671,470	-				-1.0
4,671,470	-				+0.1
4,671,470	-				+0.6
4,671,540	+				+1.8
4,671,541	-				-0.6
4,671,541	-				+0.2
4,671,648	+		Pf6N2E2_4001	0.12	-1.5
4,671,648	+		Pf6N2E2_4001	0.12	-0.8
4,671,648	+		Pf6N2E2_4001	0.12	-0.4
4,671,648	+		Pf6N2E2_4001	0.12	+0.3
4,671,648	+		Pf6N2E2_4001	0.12	+0.3
4,671,649	-		Pf6N2E2_4001	0.12	+0.9
4,671,649	-		Pf6N2E2_4001	0.12	-0.3
4,671,649	-		Pf6N2E2_4001	0.12	+0.9
4,671,649	-		Pf6N2E2_4001	0.12	-0.2
4,671,649	-		Pf6N2E2_4001	0.12	-0.4
4,671,649	-		Pf6N2E2_4001	0.12	+0.9
4,671,649	-		Pf6N2E2_4001	0.12	+0.2
4,671,765	+		Pf6N2E2_4001	0.20	-0.0
4,671,765	+		Pf6N2E2_4001	0.20	-0.7
4,671,765	+		Pf6N2E2_4001	0.20	-0.6
4,671,766	-		Pf6N2E2_4001	0.21	+1.2
4,671,766	-		Pf6N2E2_4001	0.21	-0.7
4,671,766	-		Pf6N2E2_4001	0.21	-0.5
4,671,797	-		Pf6N2E2_4001	0.23	+0.1
4,671,813	+		Pf6N2E2_4001	0.24	-0.2
4,671,813	+		Pf6N2E2_4001	0.24	-0.6
4,671,814	-		Pf6N2E2_4001	0.24	+0.4
4,671,814	-		Pf6N2E2_4001	0.24	+0.5
4,671,814	-		Pf6N2E2_4001	0.24	+0.9
4,671,814	-		Pf6N2E2_4001	0.24	+2.0
4,671,814	-		Pf6N2E2_4001	0.24	+0.4
4,671,817	+		Pf6N2E2_4001	0.24	-1.0
4,671,817	+		Pf6N2E2_4001	0.24	+0.2
4,671,817	+		Pf6N2E2_4001	0.24	-0.1
4,671,817	+		Pf6N2E2_4001	0.24	-0.2
4,671,817	+		Pf6N2E2_4001	0.24	-0.3
4,671,817	+		Pf6N2E2_4001	0.24	-0.5
4,671,817	+		Pf6N2E2_4001	0.24	+0.6
4,671,817	+		Pf6N2E2_4001	0.24	+1.8
4,671,817	+		Pf6N2E2_4001	0.24	+0.5
4,671,817	+		Pf6N2E2_4001	0.24	+0.2
4,671,817	+		Pf6N2E2_4001	0.24	+1.9
4,671,818	-		Pf6N2E2_4001	0.24	-0.1
4,671,818	-		Pf6N2E2_4001	0.24	-0.2
4,671,818	-		Pf6N2E2_4001	0.24	-1.5
4,671,818	-		Pf6N2E2_4001	0.24	-0.2
4,671,818	-		Pf6N2E2_4001	0.24	-1.2
4,671,818	-		Pf6N2E2_4001	0.24	+0.1
4,671,945	+		Pf6N2E2_4001	0.34	-0.0
4,671,945	+		Pf6N2E2_4001	0.34	-0.5
4,671,946	-		Pf6N2E2_4001	0.34	+0.9
4,671,954	+		Pf6N2E2_4001	0.34	-0.1
4,672,051	+		Pf6N2E2_4001	0.41	-0.5
4,672,051	+		Pf6N2E2_4001	0.41	-0.1
4,672,146	+		Pf6N2E2_4001	0.48	+0.4
4,672,147	-		Pf6N2E2_4001	0.48	-0.1
4,672,165	+		Pf6N2E2_4001	0.50	+0.1
4,672,320	+		Pf6N2E2_4001	0.61	+1.0
4,672,320	+		Pf6N2E2_4001	0.61	+0.3
4,672,383	+		Pf6N2E2_4001	0.66	-1.3
4,672,383	+		Pf6N2E2_4001	0.66	-0.1
4,672,383	+		Pf6N2E2_4001	0.66	-0.2
4,672,383	+		Pf6N2E2_4001	0.66	-0.3
4,672,384	-		Pf6N2E2_4001	0.66	+0.7
4,672,384	-		Pf6N2E2_4001	0.66	-0.2
4,672,430	-		Pf6N2E2_4001	0.69	+0.8
4,672,566	+		Pf6N2E2_4001	0.79	-1.0
4,672,751	+				-0.2
4,672,752	-				+0.3
4,672,888	+				+0.5
4,672,888	+				+0.0
4,672,888	+				-0.9
4,672,889	-				-0.7
4,672,889	-				+0.6
4,672,889	-				+0.9
4,672,938	+				+0.2
4,672,938	+				-0.8
4,672,939	-				+0.1
4,672,943	-				-0.8
4,672,943	-				+0.6
4,672,972	+				+0.0
4,672,973	-				-0.5
4,673,004	-				-0.6
4,673,470	+		Pf6N2E2_4002	0.29	+0.1
4,673,470	+		Pf6N2E2_4002	0.29	-0.3
4,673,470	+		Pf6N2E2_4002	0.29	-0.5
4,673,470	+		Pf6N2E2_4002	0.29	-0.3
4,673,470	+		Pf6N2E2_4002	0.29	+0.8
4,673,471	-		Pf6N2E2_4002	0.29	+0.2
4,673,471	-		Pf6N2E2_4002	0.29	-1.3
4,673,471	-		Pf6N2E2_4002	0.29	-0.5
4,673,497	+		Pf6N2E2_4002	0.32	+0.5
4,673,497	+		Pf6N2E2_4002	0.32	-0.1
4,673,700	+		Pf6N2E2_4002	0.52	-0.8
4,673,700	+		Pf6N2E2_4002	0.52	-0.1
4,673,700	+		Pf6N2E2_4002	0.52	-1.1
4,673,701	-		Pf6N2E2_4002	0.53	+0.1
4,673,701	-		Pf6N2E2_4002	0.53	+0.0
4,673,701	-		Pf6N2E2_4002	0.53	+0.8
4,673,701	-		Pf6N2E2_4002	0.53	+0.8
4,673,804	+		Pf6N2E2_4002	0.63	+0.8
4,673,804	+		Pf6N2E2_4002	0.63	-0.2
4,673,804	+		Pf6N2E2_4002	0.63	+0.6
4,673,805	-		Pf6N2E2_4002	0.63	+0.4
4,673,805	-		Pf6N2E2_4002	0.63	-0.2
4,673,805	-		Pf6N2E2_4002	0.63	-0.7