Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3053

Experiment: RCH2_defined

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntPf6N2E2_3052 and Pf6N2E2_3053 are separated by 132 nucleotidesPf6N2E2_3053 and Pf6N2E2_3054 are separated by 149 nucleotides Pf6N2E2_3052 - tRNA(Ile)-lysidine synthetase (EC 6.3.4.19), at 3,535,314 to 3,536,639 _3052 Pf6N2E2_3053 - Acetyl-coenzyme A carboxyl transferase alpha chain (EC 6.4.1.2), at 3,536,772 to 3,537,719 _3053 Pf6N2E2_3054 - DNA polymerase III alpha subunit (EC 2.7.7.7), at 3,537,869 to 3,541,390 _3054 Position (kb) 3536 3537 3538Strain fitness (log2 ratio) -1 0 1at 3536.723 kb on - strandat 3536.783 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction RCH2_defined
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3,536,723 - -0.4
3,536,783 - +1.1

Or see this region's nucleotide sequence