Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1262

Experiment: RCH2_defined

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 nt Pf6N2E2_1262 - Bipolar DNA helicase HerA, at 1,482,239 to 1,482,472 _1262 Position (kb) 1482 1483Strain fitness (log2 ratio) -1 0 1 2at 1481.399 kb on + strandat 1481.489 kb on + strandat 1481.686 kb on + strandat 1481.737 kb on - strandat 1482.326 kb on - strand, within Pf6N2E2_1262at 1482.585 kb on - strandat 1482.654 kb on - strandat 1482.915 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction RCH2_defined
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1,481,399 + -0.7
1,481,489 + -0.5
1,481,686 + -1.2
1,481,737 - -0.5
1,482,326 - Pf6N2E2_1262 0.37 +2.4
1,482,585 - -0.2
1,482,654 - +0.6
1,482,915 - -0.5

Or see this region's nucleotide sequence