Experiment: Varel_Bryant_medium_Glucose with Zinc Pyrithione 0.05 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BT0318 and BT0319 are separated by 8 nucleotides BT0319 and BT0320 are separated by 146 nucleotides BT0320 and BT0321 are separated by 37 nucleotides
BT0318: BT0318 - hypothetical protein (NCBI ptt file), at 385,353 to 386,567
BT0318
BT0319: BT0319 - hypothetical protein (NCBI ptt file), at 386,576 to 386,947
BT0319
BT0320: BT0320 - hypothetical protein (NCBI ptt file), at 387,094 to 387,897
BT0320
BT0321: BT0321 - cytidine/deoxycytidylate deaminase (NCBI ptt file), at 387,935 to 388,405
BT0321
Position (kb) 386
387 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 385.607 kb on + strand, within BT0318 at 385.608 kb on - strand, within BT0318 at 385.623 kb on + strand, within BT0318 at 385.624 kb on - strand, within BT0318 at 385.650 kb on + strand, within BT0318 at 385.758 kb on + strand, within BT0318 at 385.758 kb on + strand, within BT0318 at 385.759 kb on - strand, within BT0318 at 385.760 kb on + strand, within BT0318 at 385.760 kb on + strand, within BT0318 at 385.934 kb on + strand, within BT0318 at 385.934 kb on + strand, within BT0318 at 385.934 kb on + strand, within BT0318 at 385.959 kb on + strand, within BT0318 at 386.036 kb on - strand, within BT0318 at 386.062 kb on + strand, within BT0318 at 386.063 kb on - strand, within BT0318 at 386.067 kb on - strand, within BT0318 at 386.106 kb on - strand, within BT0318 at 386.123 kb on + strand, within BT0318 at 386.123 kb on + strand, within BT0318 at 386.186 kb on + strand, within BT0318 at 386.219 kb on - strand, within BT0318 at 386.343 kb on - strand, within BT0318 at 386.343 kb on - strand, within BT0318 at 386.388 kb on - strand, within BT0318 at 386.401 kb on - strand, within BT0318 at 386.424 kb on + strand, within BT0318 at 386.449 kb on - strand at 386.472 kb on - strand at 386.497 kb on + strand at 386.617 kb on + strand, within BT0319 at 386.703 kb on - strand, within BT0319 at 386.713 kb on + strand, within BT0319 at 386.880 kb on - strand, within BT0319 at 386.959 kb on - strand at 387.054 kb on - strand at 387.061 kb on + strand at 387.238 kb on + strand, within BT0320 at 387.436 kb on + strand, within BT0320 at 387.437 kb on - strand, within BT0320 at 387.672 kb on + strand, within BT0320 at 387.673 kb on - strand, within BT0320 at 387.673 kb on - strand, within BT0320 at 387.907 kb on + strand at 387.907 kb on + strand at 387.908 kb on - strand at 387.944 kb on + strand at 387.945 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Varel_Bryant_medium_Glucose with Zinc Pyrithione 0.05 mM remove 385,607 + BT0318 0.21 +1.5 385,608 - BT0318 0.21 -2.2 385,623 + BT0318 0.22 -1.0 385,624 - BT0318 0.22 -1.6 385,650 + BT0318 0.24 +0.0 385,758 + BT0318 0.33 -2.4 385,758 + BT0318 0.33 -0.3 385,759 - BT0318 0.33 -0.4 385,760 + BT0318 0.33 -2.6 385,760 + BT0318 0.33 -1.0 385,934 + BT0318 0.48 -3.6 385,934 + BT0318 0.48 -2.0 385,934 + BT0318 0.48 -2.4 385,959 + BT0318 0.50 -2.6 386,036 - BT0318 0.56 -0.0 386,062 + BT0318 0.58 -3.2 386,063 - BT0318 0.58 -0.0 386,067 - BT0318 0.59 -3.2 386,106 - BT0318 0.62 -1.0 386,123 + BT0318 0.63 -3.9 386,123 + BT0318 0.63 +1.5 386,186 + BT0318 0.69 -2.4 386,219 - BT0318 0.71 -1.6 386,343 - BT0318 0.81 -0.0 386,343 - BT0318 0.81 -1.0 386,388 - BT0318 0.85 -0.0 386,401 - BT0318 0.86 -1.6 386,424 + BT0318 0.88 -1.0 386,449 - -1.0 386,472 - -1.5 386,497 + -1.0 386,617 + BT0319 0.11 +1.0 386,703 - BT0319 0.34 -1.0 386,713 + BT0319 0.37 -2.4 386,880 - BT0319 0.82 -0.3 386,959 - -0.6 387,054 - -3.0 387,061 + -0.6 387,238 + BT0320 0.18 -2.8 387,436 + BT0320 0.43 +3.0 387,437 - BT0320 0.43 -1.0 387,672 + BT0320 0.72 -1.7 387,673 - BT0320 0.72 -1.0 387,673 - BT0320 0.72 -0.9 387,907 + -2.6 387,907 + +0.5 387,908 - +1.3 387,944 + -1.7 387,945 - -0.0
Or see this region's nucleotide sequence