Experiment: Varel_Bryant_medium_Glucose with Zinc Pyrithione 0.05 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BT0259 and BT0260 are separated by 122 nucleotides BT0260 and BT0261 are separated by 8 nucleotides BT0261 and BT0262 are separated by 357 nucleotides
BT0259: BT0259 - putative amidohydrolase (NCBI ptt file), at 290,470 to 291,255
BT0259
BT0260: BT0260 - acyltransferase family protein (NCBI ptt file), at 291,378 to 291,932
BT0260
BT0261: BT0261 - hypothetical protein (NCBI ptt file), at 291,941 to 292,210
BT0261
BT0262: BT0262 - hypothetical protein (NCBI ptt file), at 292,568 to 293,203
BT0262
Position (kb) 291
292
293 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 290.984 kb on + strand, within BT0259 at 290.985 kb on - strand, within BT0259 at 291.007 kb on - strand, within BT0259 at 291.009 kb on - strand, within BT0259 at 291.094 kb on - strand, within BT0259 at 291.133 kb on + strand, within BT0259 at 291.229 kb on + strand at 291.232 kb on + strand at 291.268 kb on - strand at 291.272 kb on - strand at 291.285 kb on + strand at 291.288 kb on + strand at 291.295 kb on + strand at 291.296 kb on - strand at 291.296 kb on - strand at 291.299 kb on + strand at 291.306 kb on + strand at 291.307 kb on - strand at 291.355 kb on - strand at 291.355 kb on - strand at 291.362 kb on - strand at 291.365 kb on + strand at 291.366 kb on - strand at 291.369 kb on - strand at 291.864 kb on - strand, within BT0260 at 292.010 kb on - strand, within BT0261 at 292.118 kb on - strand, within BT0261 at 292.136 kb on - strand, within BT0261 at 292.174 kb on - strand, within BT0261 at 292.174 kb on - strand, within BT0261 at 292.234 kb on - strand at 292.343 kb on + strand at 292.520 kb on - strand at 292.520 kb on - strand at 292.687 kb on - strand, within BT0262 at 292.687 kb on - strand, within BT0262 at 292.691 kb on - strand, within BT0262 at 292.760 kb on - strand, within BT0262 at 292.915 kb on - strand, within BT0262 at 292.955 kb on - strand, within BT0262 at 292.955 kb on - strand, within BT0262 at 292.957 kb on - strand, within BT0262 at 292.957 kb on - strand, within BT0262 at 292.960 kb on + strand, within BT0262 at 293.006 kb on + strand, within BT0262 at 293.008 kb on + strand, within BT0262 at 293.053 kb on - strand, within BT0262 at 293.053 kb on - strand, within BT0262 at 293.062 kb on + strand, within BT0262 at 293.103 kb on + strand, within BT0262 at 293.126 kb on - strand, within BT0262 at 293.126 kb on - strand, within BT0262 at 293.128 kb on - strand, within BT0262 at 293.151 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Varel_Bryant_medium_Glucose with Zinc Pyrithione 0.05 mM remove 290,984 + BT0259 0.65 -1.6 290,985 - BT0259 0.66 -1.0 291,007 - BT0259 0.68 -1.3 291,009 - BT0259 0.69 +0.8 291,094 - BT0259 0.79 -0.0 291,133 + BT0259 0.84 -0.0 291,229 + -0.0 291,232 + -2.7 291,268 - -1.6 291,272 - +3.0 291,285 + -0.2 291,288 + +1.6 291,295 + -1.6 291,296 - -2.0 291,296 - -0.9 291,299 + -0.5 291,306 + -2.8 291,307 - +0.4 291,355 - -0.0 291,355 - -0.0 291,362 - +1.3 291,365 + +1.2 291,366 - +2.0 291,369 - -2.0 291,864 - BT0260 0.88 +1.3 292,010 - BT0261 0.26 +2.1 292,118 - BT0261 0.66 -0.3 292,136 - BT0261 0.72 +2.8 292,174 - BT0261 0.86 -0.3 292,174 - BT0261 0.86 -1.6 292,234 - +1.0 292,343 + -2.0 292,520 - -0.8 292,520 - +2.0 292,687 - BT0262 0.19 +1.0 292,687 - BT0262 0.19 -2.3 292,691 - BT0262 0.19 -1.3 292,760 - BT0262 0.30 +0.5 292,915 - BT0262 0.55 -1.0 292,955 - BT0262 0.61 -2.3 292,955 - BT0262 0.61 -2.3 292,957 - BT0262 0.61 -0.8 292,957 - BT0262 0.61 -1.0 292,960 + BT0262 0.62 -0.0 293,006 + BT0262 0.69 -0.0 293,008 + BT0262 0.69 -1.5 293,053 - BT0262 0.76 +2.3 293,053 - BT0262 0.76 -0.9 293,062 + BT0262 0.78 +1.6 293,103 + BT0262 0.84 -1.6 293,126 - BT0262 0.88 +2.3 293,126 - BT0262 0.88 -1.6 293,128 - BT0262 0.88 -2.3 293,151 - -3.0
Or see this region's nucleotide sequence