Experiment: nitrogen source Ammonium chloride 20mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS16760 and ABZR87_RS16765 are separated by 23 nucleotides ABZR87_RS16765 and ABZR87_RS16770 are separated by 205 nucleotides
ABZR87_RS16760: ABZR87_RS16760 - GGDEF domain-containing protein, at 111,222 to 112,568
_RS16760
ABZR87_RS16765: ABZR87_RS16765 - isochorismatase family cysteine hydrolase, at 112,592 to 113,161
_RS16765
ABZR87_RS16770: ABZR87_RS16770 - HD domain-containing phosphohydrolase, at 113,367 to 116,309
_RS16770
Position (kb) 112
113
114 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 112.067 kb on + strand, within ABZR87_RS16760 at 112.524 kb on + strand at 112.524 kb on + strand at 112.524 kb on + strand at 112.524 kb on + strand at 112.524 kb on + strand at 112.524 kb on + strand at 112.525 kb on - strand at 112.525 kb on - strand at 112.594 kb on - strand at 112.692 kb on + strand, within ABZR87_RS16765 at 112.692 kb on + strand, within ABZR87_RS16765 at 112.692 kb on + strand, within ABZR87_RS16765 at 112.692 kb on + strand, within ABZR87_RS16765 at 112.693 kb on - strand, within ABZR87_RS16765 at 112.722 kb on + strand, within ABZR87_RS16765 at 112.795 kb on + strand, within ABZR87_RS16765 at 112.795 kb on + strand, within ABZR87_RS16765 at 112.795 kb on + strand, within ABZR87_RS16765 at 112.795 kb on + strand, within ABZR87_RS16765 at 112.795 kb on + strand, within ABZR87_RS16765 at 112.796 kb on - strand, within ABZR87_RS16765 at 112.796 kb on - strand, within ABZR87_RS16765 at 112.796 kb on - strand, within ABZR87_RS16765 at 112.796 kb on - strand, within ABZR87_RS16765 at 112.796 kb on - strand, within ABZR87_RS16765 at 112.840 kb on - strand, within ABZR87_RS16765 at 113.007 kb on + strand, within ABZR87_RS16765 at 113.007 kb on + strand, within ABZR87_RS16765 at 113.007 kb on + strand, within ABZR87_RS16765 at 113.008 kb on - strand, within ABZR87_RS16765 at 113.109 kb on + strand at 113.110 kb on - strand at 113.110 kb on - strand at 113.110 kb on - strand at 113.110 kb on - strand at 113.161 kb on + strand at 113.161 kb on + strand at 113.161 kb on + strand at 113.161 kb on + strand at 113.162 kb on - strand at 113.168 kb on - strand at 113.168 kb on - strand at 113.199 kb on + strand at 113.200 kb on - strand at 113.200 kb on - strand at 113.200 kb on - strand at 113.321 kb on + strand at 113.321 kb on + strand at 113.322 kb on - strand at 113.342 kb on + strand at 113.342 kb on + strand at 113.343 kb on - strand at 113.343 kb on - strand at 113.345 kb on + strand at 113.346 kb on - strand at 113.428 kb on + strand at 113.428 kb on + strand at 113.429 kb on - strand at 113.429 kb on - strand at 113.647 kb on + strand at 113.647 kb on + strand at 113.648 kb on - strand at 113.648 kb on - strand at 113.688 kb on + strand, within ABZR87_RS16770 at 113.688 kb on + strand, within ABZR87_RS16770 at 113.688 kb on + strand, within ABZR87_RS16770 at 113.688 kb on + strand, within ABZR87_RS16770 at 113.688 kb on + strand, within ABZR87_RS16770 at 113.688 kb on + strand, within ABZR87_RS16770 at 113.688 kb on + strand, within ABZR87_RS16770 at 113.688 kb on + strand, within ABZR87_RS16770 at 113.688 kb on + strand, within ABZR87_RS16770 at 113.689 kb on - strand, within ABZR87_RS16770 at 113.689 kb on - strand, within ABZR87_RS16770 at 113.689 kb on - strand, within ABZR87_RS16770 at 113.689 kb on - strand, within ABZR87_RS16770 at 113.689 kb on - strand, within ABZR87_RS16770 at 113.689 kb on - strand, within ABZR87_RS16770 at 113.689 kb on - strand, within ABZR87_RS16770 at 113.689 kb on - strand, within ABZR87_RS16770 at 113.689 kb on - strand, within ABZR87_RS16770 at 113.689 kb on - strand, within ABZR87_RS16770 at 113.689 kb on - strand, within ABZR87_RS16770 at 113.689 kb on - strand, within ABZR87_RS16770 at 113.718 kb on + strand, within ABZR87_RS16770 at 113.719 kb on - strand, within ABZR87_RS16770 at 113.719 kb on - strand, within ABZR87_RS16770 at 113.719 kb on - strand, within ABZR87_RS16770 at 113.781 kb on + strand, within ABZR87_RS16770 at 113.781 kb on + strand, within ABZR87_RS16770 at 113.781 kb on + strand, within ABZR87_RS16770 at 113.781 kb on + strand, within ABZR87_RS16770 at 113.781 kb on + strand, within ABZR87_RS16770 at 113.781 kb on + strand, within ABZR87_RS16770 at 113.781 kb on + strand, within ABZR87_RS16770 at 113.781 kb on + strand, within ABZR87_RS16770 at 113.781 kb on + strand, within ABZR87_RS16770 at 113.781 kb on + strand, within ABZR87_RS16770 at 113.782 kb on - strand, within ABZR87_RS16770 at 113.782 kb on - strand, within ABZR87_RS16770 at 113.919 kb on + strand, within ABZR87_RS16770 at 113.919 kb on + strand, within ABZR87_RS16770 at 113.919 kb on + strand, within ABZR87_RS16770 at 113.919 kb on + strand, within ABZR87_RS16770 at 113.919 kb on + strand, within ABZR87_RS16770 at 113.919 kb on + strand, within ABZR87_RS16770 at 113.919 kb on + strand, within ABZR87_RS16770 at 113.920 kb on - strand, within ABZR87_RS16770 at 113.920 kb on - strand, within ABZR87_RS16770 at 113.964 kb on + strand, within ABZR87_RS16770 at 113.964 kb on + strand, within ABZR87_RS16770 at 113.964 kb on + strand, within ABZR87_RS16770 at 113.964 kb on + strand, within ABZR87_RS16770 at 113.964 kb on + strand, within ABZR87_RS16770 at 113.965 kb on - strand, within ABZR87_RS16770 at 113.965 kb on - strand, within ABZR87_RS16770 at 113.965 kb on - strand, within ABZR87_RS16770
Per-strain Table
Position Strand Gene LocusTag Fraction nitrogen source Ammonium chloride 20mM remove 112,067 + ABZR87_RS16760 0.63 +0.1 112,524 + +0.1 112,524 + -0.6 112,524 + +0.1 112,524 + +0.3 112,524 + +0.4 112,524 + +0.3 112,525 - +0.4 112,525 - +0.4 112,594 - -0.4 112,692 + ABZR87_RS16765 0.18 +0.7 112,692 + ABZR87_RS16765 0.18 +0.1 112,692 + ABZR87_RS16765 0.18 -1.0 112,692 + ABZR87_RS16765 0.18 +0.7 112,693 - ABZR87_RS16765 0.18 +0.6 112,722 + ABZR87_RS16765 0.23 -0.5 112,795 + ABZR87_RS16765 0.36 -0.6 112,795 + ABZR87_RS16765 0.36 +0.5 112,795 + ABZR87_RS16765 0.36 +0.5 112,795 + ABZR87_RS16765 0.36 +1.0 112,795 + ABZR87_RS16765 0.36 +0.7 112,796 - ABZR87_RS16765 0.36 +1.1 112,796 - ABZR87_RS16765 0.36 +0.6 112,796 - ABZR87_RS16765 0.36 +0.4 112,796 - ABZR87_RS16765 0.36 +0.9 112,796 - ABZR87_RS16765 0.36 +1.0 112,840 - ABZR87_RS16765 0.44 +0.2 113,007 + ABZR87_RS16765 0.73 -0.5 113,007 + ABZR87_RS16765 0.73 -0.4 113,007 + ABZR87_RS16765 0.73 -0.4 113,008 - ABZR87_RS16765 0.73 -0.2 113,109 + -0.1 113,110 - -0.1 113,110 - +0.1 113,110 - +0.1 113,110 - +2.1 113,161 + -0.2 113,161 + -0.1 113,161 + +1.1 113,161 + -0.9 113,162 - +0.5 113,168 - +0.5 113,168 - -0.2 113,199 + -0.1 113,200 - +1.1 113,200 - -0.2 113,200 - -0.4 113,321 + +0.1 113,321 + +0.3 113,322 - +0.4 113,342 + -0.9 113,342 + -0.4 113,343 - -0.1 113,343 - +0.2 113,345 + -3.3 113,346 - -0.9 113,428 + -2.7 113,428 + -0.3 113,429 - +1.3 113,429 - -0.5 113,647 + -0.2 113,647 + +0.3 113,648 - -2.6 113,648 - -1.1 113,688 + ABZR87_RS16770 0.11 -0.3 113,688 + ABZR87_RS16770 0.11 +0.1 113,688 + ABZR87_RS16770 0.11 +0.3 113,688 + ABZR87_RS16770 0.11 -0.4 113,688 + ABZR87_RS16770 0.11 +0.4 113,688 + ABZR87_RS16770 0.11 -0.6 113,688 + ABZR87_RS16770 0.11 -1.9 113,688 + ABZR87_RS16770 0.11 +0.4 113,688 + ABZR87_RS16770 0.11 -0.4 113,689 - ABZR87_RS16770 0.11 +0.4 113,689 - ABZR87_RS16770 0.11 -0.8 113,689 - ABZR87_RS16770 0.11 -0.2 113,689 - ABZR87_RS16770 0.11 -0.2 113,689 - ABZR87_RS16770 0.11 -0.3 113,689 - ABZR87_RS16770 0.11 +1.0 113,689 - ABZR87_RS16770 0.11 -0.4 113,689 - ABZR87_RS16770 0.11 +1.9 113,689 - ABZR87_RS16770 0.11 +0.3 113,689 - ABZR87_RS16770 0.11 +0.4 113,689 - ABZR87_RS16770 0.11 +2.5 113,689 - ABZR87_RS16770 0.11 -0.1 113,718 + ABZR87_RS16770 0.12 -0.8 113,719 - ABZR87_RS16770 0.12 -0.9 113,719 - ABZR87_RS16770 0.12 +0.4 113,719 - ABZR87_RS16770 0.12 +0.6 113,781 + ABZR87_RS16770 0.14 +0.1 113,781 + ABZR87_RS16770 0.14 -0.1 113,781 + ABZR87_RS16770 0.14 -0.1 113,781 + ABZR87_RS16770 0.14 +1.1 113,781 + ABZR87_RS16770 0.14 -0.7 113,781 + ABZR87_RS16770 0.14 +0.4 113,781 + ABZR87_RS16770 0.14 -1.1 113,781 + ABZR87_RS16770 0.14 +1.1 113,781 + ABZR87_RS16770 0.14 +0.0 113,781 + ABZR87_RS16770 0.14 +0.2 113,782 - ABZR87_RS16770 0.14 +0.6 113,782 - ABZR87_RS16770 0.14 +0.3 113,919 + ABZR87_RS16770 0.19 -0.3 113,919 + ABZR87_RS16770 0.19 -0.0 113,919 + ABZR87_RS16770 0.19 -0.6 113,919 + ABZR87_RS16770 0.19 +0.1 113,919 + ABZR87_RS16770 0.19 -1.0 113,919 + ABZR87_RS16770 0.19 +1.2 113,919 + ABZR87_RS16770 0.19 -0.8 113,920 - ABZR87_RS16770 0.19 -0.5 113,920 - ABZR87_RS16770 0.19 -0.1 113,964 + ABZR87_RS16770 0.20 +0.7 113,964 + ABZR87_RS16770 0.20 +1.0 113,964 + ABZR87_RS16770 0.20 +0.4 113,964 + ABZR87_RS16770 0.20 -0.1 113,964 + ABZR87_RS16770 0.20 -0.2 113,965 - ABZR87_RS16770 0.20 -0.2 113,965 - ABZR87_RS16770 0.20 +0.5 113,965 - ABZR87_RS16770 0.20 +1.0
Or see this region's nucleotide sequence