Experiment: MoLS4 with L-Tryptophan as nutrient source 10mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU2590 and DVU2591 are separated by 145 nucleotides DVU2591 and DVU2592 overlap by 8 nucleotides DVU2592 and DORF19110 are separated by 2 nucleotides
DVU2590: DVU2590 - sensory box protein (TIGR), at 2,713,242 to 2,714,807
DVU2590
DVU2591: DVU2591 - tail fiber assembly protein, putative (TIGR), at 2,714,953 to 2,715,462
DVU2591
DVU2592: DVU2592 - hypothetical protein (TIGR), at 2,715,455 to 2,715,793
DVU2592
DORF19110: DORF19110 - SEED: FIG00607238: hypothetical protein, at 2,715,796 to 2,716,848
DORF19110
Position (kb)
2715
2716 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 2714.469 kb on - strand, within DVU2590 at 2714.509 kb on + strand, within DVU2590 at 2714.560 kb on + strand, within DVU2590 at 2714.612 kb on + strand, within DVU2590 at 2714.662 kb on - strand at 2714.675 kb on - strand at 2714.750 kb on + strand at 2714.758 kb on - strand at 2714.849 kb on + strand at 2714.883 kb on - strand at 2714.958 kb on - strand at 2714.965 kb on + strand at 2714.986 kb on - strand at 2715.032 kb on - strand, within DVU2591 at 2715.060 kb on + strand, within DVU2591 at 2715.294 kb on + strand, within DVU2591 at 2715.339 kb on - strand, within DVU2591 at 2715.385 kb on - strand, within DVU2591 at 2715.399 kb on + strand, within DVU2591 at 2715.472 kb on + strand at 2715.724 kb on + strand, within DVU2592 at 2715.731 kb on + strand, within DVU2592 at 2715.731 kb on + strand, within DVU2592 at 2715.731 kb on + strand, within DVU2592 at 2715.731 kb on + strand, within DVU2592 at 2715.848 kb on - strand at 2716.216 kb on - strand, within DORF19110 at 2716.282 kb on + strand, within DORF19110 at 2716.304 kb on + strand, within DORF19110 at 2716.309 kb on + strand, within DORF19110 at 2716.327 kb on - strand, within DORF19110 at 2716.521 kb on + strand, within DORF19110 at 2716.566 kb on + strand, within DORF19110 at 2716.566 kb on + strand, within DORF19110 at 2716.574 kb on - strand, within DORF19110 at 2716.574 kb on - strand, within DORF19110 at 2716.574 kb on - strand, within DORF19110 at 2716.574 kb on - strand, within DORF19110 at 2716.688 kb on + strand, within DORF19110 at 2716.693 kb on + strand, within DORF19110 at 2716.696 kb on - strand, within DORF19110 at 2716.726 kb on - strand, within DORF19110 at 2716.728 kb on + strand, within DORF19110 at 2716.736 kb on - strand, within DORF19110 at 2716.787 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with L-Tryptophan as nutrient source 10mM remove 2,714,469 - DVU2590 0.78 +0.1 2,714,509 + DVU2590 0.81 -0.5 2,714,560 + DVU2590 0.84 +1.4 2,714,612 + DVU2590 0.87 +1.0 2,714,662 - +0.3 2,714,675 - -2.3 2,714,750 + -0.1 2,714,758 - +0.9 2,714,849 + -1.9 2,714,883 - +1.1 2,714,958 - -0.2 2,714,965 + -0.0 2,714,986 - -1.2 2,715,032 - DVU2591 0.15 -1.3 2,715,060 + DVU2591 0.21 -0.8 2,715,294 + DVU2591 0.67 -0.6 2,715,339 - DVU2591 0.76 +0.4 2,715,385 - DVU2591 0.85 +0.2 2,715,399 + DVU2591 0.87 -1.2 2,715,472 + +0.2 2,715,724 + DVU2592 0.79 -0.2 2,715,731 + DVU2592 0.81 -3.8 2,715,731 + DVU2592 0.81 -1.3 2,715,731 + DVU2592 0.81 -1.4 2,715,731 + DVU2592 0.81 -0.5 2,715,848 - -0.8 2,716,216 - DORF19110 0.40 -0.6 2,716,282 + DORF19110 0.46 +0.2 2,716,304 + DORF19110 0.48 +1.4 2,716,309 + DORF19110 0.49 -0.4 2,716,327 - DORF19110 0.50 +0.1 2,716,521 + DORF19110 0.69 -0.5 2,716,566 + DORF19110 0.73 +0.1 2,716,566 + DORF19110 0.73 -0.2 2,716,574 - DORF19110 0.74 -0.5 2,716,574 - DORF19110 0.74 -0.3 2,716,574 - DORF19110 0.74 -0.8 2,716,574 - DORF19110 0.74 -0.1 2,716,688 + DORF19110 0.85 -2.1 2,716,693 + DORF19110 0.85 +0.4 2,716,696 - DORF19110 0.85 -0.9 2,716,726 - DORF19110 0.88 +0.8 2,716,728 + DORF19110 0.89 +0.0 2,716,736 - DORF19110 0.89 +0.4 2,716,787 + -0.2
Or see this region's nucleotide sequence