Experiment: KB with Dimethyl Sulfoxide 1.25 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_4385 and Psyr_4386 are separated by 330 nucleotides Psyr_4386 and Psyr_4387 are separated by 95 nucleotides Psyr_4387 and Psyr_4388 are separated by 108 nucleotides Psyr_4388 and Psyr_4389 are separated by 42 nucleotides
Psyr_4385: Psyr_4385 - Alpha-2-macroglobulin, N-terminal:Alpha-2-macroglobulin, N-terminal, at 5,242,625 to 5,247,583
_4385
Psyr_4386: Psyr_4386 - conserved hypothetical protein, at 5,247,914 to 5,248,207
_4386
Psyr_4387: Psyr_4387 - Glycosyl transferase, family 51:Penicillin-binding protein, transpeptidase:Penicillin-binding, C-terminal, at 5,248,303 to 5,250,651
_4387
Psyr_4388: Psyr_4388 - Response regulator receiver, at 5,250,760 to 5,251,167
_4388
Psyr_4389: Psyr_4389 - Flp/Fap pilin component, at 5,251,210 to 5,251,416
_4389
Position (kb) 5248
5249
5250
5251 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 5247.411 kb on - strand at 5247.411 kb on - strand at 5247.458 kb on + strand at 5247.459 kb on - strand at 5247.459 kb on - strand at 5247.459 kb on - strand at 5247.612 kb on + strand at 5247.704 kb on - strand at 5247.759 kb on + strand at 5247.767 kb on + strand at 5247.901 kb on - strand at 5248.008 kb on + strand, within Psyr_4386 at 5248.008 kb on + strand, within Psyr_4386 at 5248.008 kb on + strand, within Psyr_4386 at 5248.008 kb on + strand, within Psyr_4386 at 5248.009 kb on - strand, within Psyr_4386 at 5248.009 kb on - strand, within Psyr_4386 at 5248.199 kb on + strand at 5248.199 kb on + strand at 5248.199 kb on + strand at 5248.199 kb on + strand at 5248.199 kb on + strand at 5248.199 kb on + strand at 5248.200 kb on - strand at 5248.200 kb on - strand at 5248.200 kb on - strand at 5248.207 kb on + strand at 5248.207 kb on + strand at 5248.207 kb on + strand at 5248.207 kb on + strand at 5248.207 kb on + strand at 5248.207 kb on + strand at 5248.207 kb on + strand at 5248.207 kb on + strand at 5248.207 kb on + strand at 5248.207 kb on + strand at 5248.207 kb on + strand at 5248.207 kb on + strand at 5248.207 kb on + strand at 5248.207 kb on + strand at 5248.207 kb on + strand at 5248.207 kb on + strand at 5248.207 kb on + strand at 5248.207 kb on + strand at 5248.207 kb on + strand at 5248.207 kb on + strand at 5248.207 kb on + strand at 5248.208 kb on - strand at 5248.208 kb on - strand at 5248.208 kb on - strand at 5248.208 kb on - strand at 5248.208 kb on - strand at 5248.208 kb on - strand at 5248.208 kb on - strand at 5248.208 kb on - strand at 5248.208 kb on - strand at 5248.208 kb on - strand at 5248.208 kb on - strand at 5248.208 kb on - strand at 5248.208 kb on - strand at 5248.208 kb on - strand at 5248.208 kb on - strand at 5248.208 kb on - strand at 5248.208 kb on - strand at 5248.208 kb on - strand at 5248.208 kb on - strand at 5248.208 kb on - strand at 5248.208 kb on - strand at 5248.208 kb on - strand at 5248.208 kb on - strand at 5248.208 kb on - strand at 5248.208 kb on - strand at 5248.208 kb on - strand at 5248.208 kb on - strand at 5248.208 kb on - strand at 5248.208 kb on - strand at 5248.208 kb on - strand at 5248.211 kb on + strand at 5248.211 kb on + strand at 5248.211 kb on + strand at 5248.211 kb on + strand at 5248.211 kb on + strand at 5248.211 kb on + strand at 5248.211 kb on + strand at 5248.211 kb on + strand at 5248.211 kb on + strand at 5248.211 kb on + strand at 5248.211 kb on + strand at 5248.211 kb on + strand at 5248.211 kb on + strand at 5248.211 kb on + strand at 5248.211 kb on + strand at 5248.211 kb on + strand at 5248.211 kb on + strand at 5248.211 kb on + strand at 5248.211 kb on + strand at 5248.211 kb on + strand at 5248.212 kb on - strand at 5248.212 kb on - strand at 5248.212 kb on - strand at 5248.212 kb on - strand at 5248.212 kb on - strand at 5248.212 kb on - strand at 5248.212 kb on - strand at 5248.212 kb on - strand at 5248.212 kb on - strand at 5248.212 kb on - strand at 5248.212 kb on - strand at 5248.212 kb on - strand at 5248.212 kb on - strand at 5248.212 kb on - strand at 5248.212 kb on - strand at 5248.212 kb on - strand at 5248.212 kb on - strand at 5248.212 kb on - strand at 5248.212 kb on - strand at 5248.212 kb on - strand at 5248.212 kb on - strand at 5248.212 kb on - strand at 5248.212 kb on - strand at 5248.288 kb on + strand at 5248.288 kb on + strand at 5248.493 kb on + strand at 5248.494 kb on - strand at 5248.494 kb on - strand at 5248.532 kb on - strand at 5248.534 kb on + strand at 5248.534 kb on + strand at 5248.535 kb on - strand at 5248.535 kb on - strand at 5248.535 kb on - strand at 5248.555 kb on + strand, within Psyr_4387 at 5248.556 kb on - strand, within Psyr_4387 at 5248.556 kb on - strand, within Psyr_4387 at 5248.573 kb on + strand, within Psyr_4387 at 5248.574 kb on - strand, within Psyr_4387 at 5248.643 kb on + strand, within Psyr_4387 at 5248.644 kb on - strand, within Psyr_4387 at 5248.644 kb on - strand, within Psyr_4387 at 5248.704 kb on + strand, within Psyr_4387 at 5248.704 kb on + strand, within Psyr_4387 at 5248.704 kb on + strand, within Psyr_4387 at 5248.704 kb on + strand, within Psyr_4387 at 5248.704 kb on + strand, within Psyr_4387 at 5248.704 kb on + strand, within Psyr_4387 at 5248.705 kb on - strand, within Psyr_4387 at 5248.705 kb on - strand, within Psyr_4387 at 5248.705 kb on - strand, within Psyr_4387 at 5248.705 kb on - strand, within Psyr_4387 at 5248.705 kb on - strand, within Psyr_4387 at 5248.705 kb on - strand, within Psyr_4387 at 5248.705 kb on - strand, within Psyr_4387 at 5248.705 kb on - strand, within Psyr_4387 at 5248.705 kb on - strand, within Psyr_4387 at 5248.705 kb on - strand, within Psyr_4387 at 5248.705 kb on - strand, within Psyr_4387 at 5248.705 kb on - strand, within Psyr_4387 at 5248.786 kb on + strand, within Psyr_4387 at 5248.787 kb on - strand, within Psyr_4387 at 5248.918 kb on - strand, within Psyr_4387 at 5249.247 kb on - strand, within Psyr_4387 at 5249.254 kb on + strand, within Psyr_4387 at 5249.254 kb on + strand, within Psyr_4387 at 5249.255 kb on - strand, within Psyr_4387 at 5249.255 kb on - strand, within Psyr_4387 at 5249.662 kb on + strand, within Psyr_4387 at 5249.663 kb on - strand, within Psyr_4387 at 5249.663 kb on - strand, within Psyr_4387 at 5249.822 kb on + strand, within Psyr_4387 at 5249.860 kb on + strand, within Psyr_4387 at 5249.861 kb on - strand, within Psyr_4387 at 5250.002 kb on + strand, within Psyr_4387 at 5250.002 kb on + strand, within Psyr_4387 at 5250.002 kb on + strand, within Psyr_4387 at 5250.002 kb on + strand, within Psyr_4387 at 5250.002 kb on + strand, within Psyr_4387 at 5250.002 kb on + strand, within Psyr_4387 at 5250.003 kb on - strand, within Psyr_4387 at 5250.003 kb on - strand, within Psyr_4387 at 5250.003 kb on - strand, within Psyr_4387 at 5250.003 kb on - strand, within Psyr_4387 at 5250.003 kb on - strand, within Psyr_4387 at 5250.003 kb on - strand, within Psyr_4387 at 5250.003 kb on - strand, within Psyr_4387 at 5250.003 kb on - strand, within Psyr_4387 at 5250.003 kb on - strand, within Psyr_4387 at 5250.465 kb on - strand at 5250.514 kb on - strand at 5250.699 kb on + strand at 5250.721 kb on + strand at 5250.827 kb on + strand, within Psyr_4388 at 5250.827 kb on + strand, within Psyr_4388 at 5250.827 kb on + strand, within Psyr_4388 at 5250.827 kb on + strand, within Psyr_4388 at 5250.827 kb on + strand, within Psyr_4388 at 5250.828 kb on - strand, within Psyr_4388 at 5250.828 kb on - strand, within Psyr_4388 at 5250.828 kb on - strand, within Psyr_4388 at 5251.173 kb on + strand at 5251.200 kb on + strand at 5251.200 kb on + strand at 5251.200 kb on + strand at 5251.200 kb on + strand at 5251.200 kb on + strand at 5251.201 kb on - strand at 5251.201 kb on - strand at 5251.201 kb on - strand at 5251.204 kb on - strand at 5251.211 kb on + strand at 5251.211 kb on + strand at 5251.211 kb on + strand at 5251.211 kb on + strand at 5251.211 kb on + strand at 5251.212 kb on - strand at 5251.212 kb on - strand at 5251.212 kb on - strand at 5251.216 kb on + strand at 5251.221 kb on + strand at 5251.221 kb on + strand at 5251.224 kb on + strand at 5251.245 kb on + strand, within Psyr_4389 at 5251.245 kb on + strand, within Psyr_4389 at 5251.246 kb on - strand, within Psyr_4389 at 5251.246 kb on - strand, within Psyr_4389 at 5251.246 kb on - strand, within Psyr_4389 at 5251.246 kb on - strand, within Psyr_4389 at 5251.300 kb on + strand, within Psyr_4389 at 5251.318 kb on + strand, within Psyr_4389 at 5251.331 kb on + strand, within Psyr_4389 at 5251.385 kb on + strand, within Psyr_4389 at 5251.385 kb on + strand, within Psyr_4389 at 5251.385 kb on + strand, within Psyr_4389 at 5251.385 kb on + strand, within Psyr_4389 at 5251.386 kb on - strand, within Psyr_4389 at 5251.386 kb on - strand, within Psyr_4389 at 5251.386 kb on - strand, within Psyr_4389 at 5251.386 kb on - strand, within Psyr_4389 at 5251.386 kb on - strand, within Psyr_4389 at 5251.386 kb on - strand, within Psyr_4389 at 5251.397 kb on + strand at 5251.397 kb on + strand at 5251.397 kb on + strand at 5251.397 kb on + strand at 5251.397 kb on + strand at 5251.397 kb on + strand at 5251.397 kb on + strand at 5251.398 kb on - strand at 5251.398 kb on - strand at 5251.398 kb on - strand at 5251.398 kb on - strand at 5251.398 kb on - strand at 5251.398 kb on - strand at 5251.398 kb on - strand at 5251.465 kb on + strand at 5251.465 kb on + strand at 5251.465 kb on + strand at 5251.465 kb on + strand at 5251.465 kb on + strand at 5251.465 kb on + strand at 5251.465 kb on + strand at 5251.466 kb on - strand at 5251.466 kb on - strand at 5251.466 kb on - strand at 5251.466 kb on - strand at 5251.466 kb on - strand at 5251.466 kb on - strand at 5251.466 kb on - strand at 5251.467 kb on + strand at 5251.467 kb on + strand at 5251.468 kb on - strand at 5251.468 kb on - strand at 5251.468 kb on - strand at 5251.468 kb on - strand at 5251.468 kb on - strand at 5251.468 kb on - strand at 5251.481 kb on - strand at 5251.541 kb on + strand at 5251.581 kb on - strand at 5251.606 kb on - strand at 5251.608 kb on - strand at 5251.642 kb on + strand at 5251.642 kb on + strand at 5251.642 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Dimethyl Sulfoxide 1.25 vol% remove 5,247,411 - -1.2 5,247,411 - -0.4 5,247,458 + -1.5 5,247,459 - -1.4 5,247,459 - -0.6 5,247,459 - -0.5 5,247,612 + +0.0 5,247,704 - -1.2 5,247,759 + -1.3 5,247,767 + +1.3 5,247,901 - -0.7 5,248,008 + Psyr_4386 0.32 +0.9 5,248,008 + Psyr_4386 0.32 -2.1 5,248,008 + Psyr_4386 0.32 -0.1 5,248,008 + Psyr_4386 0.32 -0.5 5,248,009 - Psyr_4386 0.32 -0.7 5,248,009 - Psyr_4386 0.32 -0.7 5,248,199 + +0.0 5,248,199 + -1.1 5,248,199 + -2.5 5,248,199 + -0.5 5,248,199 + -0.5 5,248,199 + +0.3 5,248,200 - -2.0 5,248,200 - -0.2 5,248,200 - +0.9 5,248,207 + +0.3 5,248,207 + +0.3 5,248,207 + -0.2 5,248,207 + +2.1 5,248,207 + -0.2 5,248,207 + +2.6 5,248,207 + +0.6 5,248,207 + +0.3 5,248,207 + -0.6 5,248,207 + +0.7 5,248,207 + -0.2 5,248,207 + -0.2 5,248,207 + +0.0 5,248,207 + -0.1 5,248,207 + +0.8 5,248,207 + +0.3 5,248,207 + -0.2 5,248,207 + +2.5 5,248,207 + +0.5 5,248,207 + +0.2 5,248,207 + -2.9 5,248,208 - +0.8 5,248,208 - +0.1 5,248,208 - -0.5 5,248,208 - -0.4 5,248,208 - +0.8 5,248,208 - -1.2 5,248,208 - +0.4 5,248,208 - -0.7 5,248,208 - -1.2 5,248,208 - -0.0 5,248,208 - +0.6 5,248,208 - +0.7 5,248,208 - -0.4 5,248,208 - -0.4 5,248,208 - -0.1 5,248,208 - +2.1 5,248,208 - +0.5 5,248,208 - -0.4 5,248,208 - -0.5 5,248,208 - -1.4 5,248,208 - +0.7 5,248,208 - +0.3 5,248,208 - +0.6 5,248,208 - -0.1 5,248,208 - +0.5 5,248,208 - +1.3 5,248,208 - +0.3 5,248,208 - +0.2 5,248,208 - +0.3 5,248,208 - -0.3 5,248,211 + +1.4 5,248,211 + +0.3 5,248,211 + +0.6 5,248,211 + +0.3 5,248,211 + -0.6 5,248,211 + -0.5 5,248,211 + +0.6 5,248,211 + +0.8 5,248,211 + +1.6 5,248,211 + -0.8 5,248,211 + +0.2 5,248,211 + +0.6 5,248,211 + -0.1 5,248,211 + +0.7 5,248,211 + +0.4 5,248,211 + +0.3 5,248,211 + -0.5 5,248,211 + +0.5 5,248,211 + -0.9 5,248,211 + +0.6 5,248,212 - -0.4 5,248,212 - -0.1 5,248,212 - -0.5 5,248,212 - -0.5 5,248,212 - +0.6 5,248,212 - -1.3 5,248,212 - -0.1 5,248,212 - -0.3 5,248,212 - +0.3 5,248,212 - -0.2 5,248,212 - +0.5 5,248,212 - +1.3 5,248,212 - +0.0 5,248,212 - -0.3 5,248,212 - +0.2 5,248,212 - -0.9 5,248,212 - -0.4 5,248,212 - -1.3 5,248,212 - -0.3 5,248,212 - +0.2 5,248,212 - -0.7 5,248,212 - -0.3 5,248,212 - +1.7 5,248,288 + -0.8 5,248,288 + -0.1 5,248,493 + -1.7 5,248,494 - -0.4 5,248,494 - -0.3 5,248,532 - -1.0 5,248,534 + +0.0 5,248,534 + -1.1 5,248,535 - +0.9 5,248,535 - +1.0 5,248,535 - +0.4 5,248,555 + Psyr_4387 0.11 +0.5 5,248,556 - Psyr_4387 0.11 -0.0 5,248,556 - Psyr_4387 0.11 -0.9 5,248,573 + Psyr_4387 0.11 +0.5 5,248,574 - Psyr_4387 0.12 -0.1 5,248,643 + Psyr_4387 0.14 -0.3 5,248,644 - Psyr_4387 0.15 -2.4 5,248,644 - Psyr_4387 0.15 +0.3 5,248,704 + Psyr_4387 0.17 -0.4 5,248,704 + Psyr_4387 0.17 -0.7 5,248,704 + Psyr_4387 0.17 -1.3 5,248,704 + Psyr_4387 0.17 -0.8 5,248,704 + Psyr_4387 0.17 -0.2 5,248,704 + Psyr_4387 0.17 -1.5 5,248,705 - Psyr_4387 0.17 +0.8 5,248,705 - Psyr_4387 0.17 +0.2 5,248,705 - Psyr_4387 0.17 -0.7 5,248,705 - Psyr_4387 0.17 -0.1 5,248,705 - Psyr_4387 0.17 -0.8 5,248,705 - Psyr_4387 0.17 -1.1 5,248,705 - Psyr_4387 0.17 +0.1 5,248,705 - Psyr_4387 0.17 +0.4 5,248,705 - Psyr_4387 0.17 +0.7 5,248,705 - Psyr_4387 0.17 -2.2 5,248,705 - Psyr_4387 0.17 -0.5 5,248,705 - Psyr_4387 0.17 +0.5 5,248,786 + Psyr_4387 0.21 +0.3 5,248,787 - Psyr_4387 0.21 +0.6 5,248,918 - Psyr_4387 0.26 -0.6 5,249,247 - Psyr_4387 0.40 +0.3 5,249,254 + Psyr_4387 0.40 -0.1 5,249,254 + Psyr_4387 0.40 -0.1 5,249,255 - Psyr_4387 0.41 -0.9 5,249,255 - Psyr_4387 0.41 +0.1 5,249,662 + Psyr_4387 0.58 -2.3 5,249,663 - Psyr_4387 0.58 +0.3 5,249,663 - Psyr_4387 0.58 +0.7 5,249,822 + Psyr_4387 0.65 -1.1 5,249,860 + Psyr_4387 0.66 +0.6 5,249,861 - Psyr_4387 0.66 -0.9 5,250,002 + Psyr_4387 0.72 -1.3 5,250,002 + Psyr_4387 0.72 +0.9 5,250,002 + Psyr_4387 0.72 +0.6 5,250,002 + Psyr_4387 0.72 +0.3 5,250,002 + Psyr_4387 0.72 -0.5 5,250,002 + Psyr_4387 0.72 +0.7 5,250,003 - Psyr_4387 0.72 +0.3 5,250,003 - Psyr_4387 0.72 +0.3 5,250,003 - Psyr_4387 0.72 -0.0 5,250,003 - Psyr_4387 0.72 -0.8 5,250,003 - Psyr_4387 0.72 -1.2 5,250,003 - Psyr_4387 0.72 -0.1 5,250,003 - Psyr_4387 0.72 -0.0 5,250,003 - Psyr_4387 0.72 -0.4 5,250,003 - Psyr_4387 0.72 -0.6 5,250,465 - -0.2 5,250,514 - -1.0 5,250,699 + -0.9 5,250,721 + -0.4 5,250,827 + Psyr_4388 0.16 +0.0 5,250,827 + Psyr_4388 0.16 -0.7 5,250,827 + Psyr_4388 0.16 -0.1 5,250,827 + Psyr_4388 0.16 +0.5 5,250,827 + Psyr_4388 0.16 -2.2 5,250,828 - Psyr_4388 0.17 -1.1 5,250,828 - Psyr_4388 0.17 -0.4 5,250,828 - Psyr_4388 0.17 +0.3 5,251,173 + +0.5 5,251,200 + -0.5 5,251,200 + -0.7 5,251,200 + -0.5 5,251,200 + -1.8 5,251,200 + -0.7 5,251,201 - +0.4 5,251,201 - +1.9 5,251,201 - -0.7 5,251,204 - -0.6 5,251,211 + -1.1 5,251,211 + -2.6 5,251,211 + -0.8 5,251,211 + -1.1 5,251,211 + -3.7 5,251,212 - +1.1 5,251,212 - +0.0 5,251,212 - -1.0 5,251,216 + -0.3 5,251,221 + -0.6 5,251,221 + +0.3 5,251,224 + -1.3 5,251,245 + Psyr_4389 0.17 -1.7 5,251,245 + Psyr_4389 0.17 -0.4 5,251,246 - Psyr_4389 0.17 +0.3 5,251,246 - Psyr_4389 0.17 -0.5 5,251,246 - Psyr_4389 0.17 -1.0 5,251,246 - Psyr_4389 0.17 +0.9 5,251,300 + Psyr_4389 0.43 -1.3 5,251,318 + Psyr_4389 0.52 +0.0 5,251,331 + Psyr_4389 0.58 +1.7 5,251,385 + Psyr_4389 0.85 -1.1 5,251,385 + Psyr_4389 0.85 +0.3 5,251,385 + Psyr_4389 0.85 -3.1 5,251,385 + Psyr_4389 0.85 -1.7 5,251,386 - Psyr_4389 0.85 +0.3 5,251,386 - Psyr_4389 0.85 +0.9 5,251,386 - Psyr_4389 0.85 +0.1 5,251,386 - Psyr_4389 0.85 +1.0 5,251,386 - Psyr_4389 0.85 -0.6 5,251,386 - Psyr_4389 0.85 +1.5 5,251,397 + -3.3 5,251,397 + +0.5 5,251,397 + -0.1 5,251,397 + -1.5 5,251,397 + -0.7 5,251,397 + -3.0 5,251,397 + -2.5 5,251,398 - +0.0 5,251,398 - -0.4 5,251,398 - -1.1 5,251,398 - +0.1 5,251,398 - -0.8 5,251,398 - +0.3 5,251,398 - -1.4 5,251,465 + -3.2 5,251,465 + -0.1 5,251,465 + -0.5 5,251,465 + -1.7 5,251,465 + +0.0 5,251,465 + -0.7 5,251,465 + +0.3 5,251,466 - +0.8 5,251,466 - +0.3 5,251,466 - +0.7 5,251,466 - -0.3 5,251,466 - -0.3 5,251,466 - -0.3 5,251,466 - +0.7 5,251,467 + -0.3 5,251,467 + -0.2 5,251,468 - -0.1 5,251,468 - -0.4 5,251,468 - -0.8 5,251,468 - -0.5 5,251,468 - -0.1 5,251,468 - +0.0 5,251,481 - +0.4 5,251,541 + +0.5 5,251,581 - -0.0 5,251,606 - -1.4 5,251,608 - +0.4 5,251,642 + -0.8 5,251,642 + +1.4 5,251,642 + +0.8
Or see this region's nucleotide sequence