Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_3231

Experiment: KB with Dimethyl Sulfoxide 1.25 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Dimethyl Sulfoxide 1.25 vol%
3,869,161	+		Psyr_3230	0.27	+2.1
3,869,161	+		Psyr_3230	0.27	+0.3
3,869,161	+		Psyr_3230	0.27	+2.2
3,869,161	+		Psyr_3230	0.27	-0.2
3,869,161	+		Psyr_3230	0.27	+0.3
3,869,161	+		Psyr_3230	0.27	-0.0
3,869,161	+		Psyr_3230	0.27	-0.5
3,869,161	+		Psyr_3230	0.27	-0.1
3,869,161	+		Psyr_3230	0.27	+2.1
3,869,162	-		Psyr_3230	0.27	+0.2
3,869,162	-		Psyr_3230	0.27	+1.0
3,869,162	-		Psyr_3230	0.27	-0.2
3,869,206	+		Psyr_3230	0.30	+1.2
3,869,207	-		Psyr_3230	0.31	+0.1
3,869,269	+		Psyr_3230	0.36	+0.4
3,869,269	+		Psyr_3230	0.36	-0.1
3,869,269	+		Psyr_3230	0.36	-1.7
3,869,269	+		Psyr_3230	0.36	-1.8
3,869,269	+		Psyr_3230	0.36	-0.1
3,869,270	-		Psyr_3230	0.36	+1.5
3,869,270	-		Psyr_3230	0.36	-0.2
3,869,270	-		Psyr_3230	0.36	-0.5
3,869,270	-		Psyr_3230	0.36	-0.1
3,869,270	-		Psyr_3230	0.36	-0.2
3,869,270	-		Psyr_3230	0.36	-0.7
3,869,384	-		Psyr_3230	0.45	+0.9
3,869,437	+		Psyr_3230	0.49	-1.1
3,869,437	+		Psyr_3230	0.49	+0.5
3,869,438	-		Psyr_3230	0.49	-0.5
3,869,438	-		Psyr_3230	0.49	+0.0
3,869,438	-		Psyr_3230	0.49	+1.8
3,869,438	-		Psyr_3230	0.49	+2.4
3,869,438	-		Psyr_3230	0.49	+0.0
3,869,438	-		Psyr_3230	0.49	+0.4
3,869,438	-		Psyr_3230	0.49	-0.5
3,869,438	-		Psyr_3230	0.49	+0.8
3,869,438	-		Psyr_3230	0.49	-0.8
3,869,464	+		Psyr_3230	0.51	+0.6
3,869,465	-		Psyr_3230	0.52	-0.1
3,869,628	+		Psyr_3230	0.65	+1.6
3,869,628	+		Psyr_3230	0.65	+0.1
3,869,628	+		Psyr_3230	0.65	+0.9
3,869,629	-		Psyr_3230	0.65	+0.3
3,870,079	+				+0.2
3,870,080	-				+1.6
3,870,080	-				+0.7
3,870,080	-				-0.8
3,870,260	+		Psyr_3231	0.13	+1.5
3,870,261	-		Psyr_3231	0.13	+0.2
3,870,272	+		Psyr_3231	0.14	+2.3
3,870,273	-		Psyr_3231	0.14	+0.1
3,870,273	-		Psyr_3231	0.14	+0.6
3,870,273	-		Psyr_3231	0.14	+0.1
3,870,600	-		Psyr_3231	0.37	+0.6
3,870,600	-		Psyr_3231	0.37	+0.5
3,870,655	-		Psyr_3231	0.41	+0.8
3,870,713	+		Psyr_3231	0.45	+0.2
3,870,713	+		Psyr_3231	0.45	-0.4
3,870,713	+		Psyr_3231	0.45	-0.4
3,870,713	+		Psyr_3231	0.45	+0.2
3,870,713	+		Psyr_3231	0.45	+0.7
3,870,713	+		Psyr_3231	0.45	-1.4
3,870,713	+		Psyr_3231	0.45	+1.4
3,870,713	+		Psyr_3231	0.45	-0.7
3,870,713	+		Psyr_3231	0.45	-1.1
3,870,713	+		Psyr_3231	0.45	-0.8
3,870,713	+		Psyr_3231	0.45	+1.1
3,870,713	+		Psyr_3231	0.45	+0.8
3,870,713	+		Psyr_3231	0.45	+0.5
3,870,713	+		Psyr_3231	0.45	-0.3
3,870,713	+		Psyr_3231	0.45	+0.8
3,870,713	+		Psyr_3231	0.45	+1.7
3,870,713	+		Psyr_3231	0.45	+0.5
3,870,713	+		Psyr_3231	0.45	+0.5
3,870,713	+		Psyr_3231	0.45	+0.7
3,870,714	-		Psyr_3231	0.45	+1.1
3,870,714	-		Psyr_3231	0.45	+0.5
3,870,714	-		Psyr_3231	0.45	-1.2
3,870,714	-		Psyr_3231	0.45	+0.5
3,870,714	-		Psyr_3231	0.45	-0.5
3,870,714	-		Psyr_3231	0.45	+0.7
3,870,714	-		Psyr_3231	0.45	+1.4
3,870,714	-		Psyr_3231	0.45	+0.3
3,870,714	-		Psyr_3231	0.45	+1.7
3,870,714	-		Psyr_3231	0.45	+1.1
3,870,714	-		Psyr_3231	0.45	-0.4
3,870,714	-		Psyr_3231	0.45	+0.1
3,870,714	-		Psyr_3231	0.45	+0.4
3,870,714	-		Psyr_3231	0.45	+0.4
3,870,714	-		Psyr_3231	0.45	+0.2
3,870,714	-		Psyr_3231	0.45	+0.8
3,870,714	-		Psyr_3231	0.45	-0.1
3,870,714	-		Psyr_3231	0.45	+2.9
3,870,714	-		Psyr_3231	0.45	-1.8
3,870,714	-		Psyr_3231	0.45	+0.7
3,870,714	-		Psyr_3231	0.45	+0.2
3,870,714	-		Psyr_3231	0.45	+0.5
3,870,714	-		Psyr_3231	0.45	+1.2
3,870,714	-		Psyr_3231	0.45	+0.2
3,870,714	-		Psyr_3231	0.45	-0.5
3,870,714	-		Psyr_3231	0.45	+0.8
3,870,715	+		Psyr_3231	0.45	+1.2
3,870,716	-		Psyr_3231	0.46	-0.2
3,871,397	+				-0.7
3,871,397	+				-0.2
3,871,398	-				-0.1
3,871,398	-				-0.2
3,871,398	-				+0.1
3,871,586	+				+0.5
3,871,638	+				-0.6
3,871,638	+				+0.3
3,871,638	+				+1.3
3,871,638	+				+0.7
3,871,639	-				-1.1
3,871,639	-				+0.7
3,871,639	-				+0.3
3,871,639	-				+1.2
3,871,639	-				-0.2
3,871,639	-				-0.4
3,871,639	-				+0.1
3,871,639	-				+0.6
3,871,639	-				-1.1
3,871,639	-				+1.2
3,871,777	+		Psyr_3232	0.20	+0.3
3,871,792	+		Psyr_3232	0.21	+0.5
3,871,813	-		Psyr_3232	0.23	+1.3
3,871,915	+		Psyr_3232	0.32	+0.1
3,871,915	+		Psyr_3232	0.32	-0.2
3,871,916	-		Psyr_3232	0.32	+0.9
3,871,916	-		Psyr_3232	0.32	+0.2
3,871,928	+		Psyr_3232	0.33	-1.0
3,871,928	+		Psyr_3232	0.33	+0.6
3,871,928	+		Psyr_3232	0.33	-0.5
3,871,928	+		Psyr_3232	0.33	+0.4
3,871,928	+		Psyr_3232	0.33	+0.3
3,871,929	-		Psyr_3232	0.34	-0.1
3,871,929	-		Psyr_3232	0.34	+0.4
3,871,929	-		Psyr_3232	0.34	+0.5
3,872,002	+		Psyr_3232	0.40	-0.6
3,872,002	+		Psyr_3232	0.40	-1.9
3,872,002	+		Psyr_3232	0.40	-1.2
3,872,003	-		Psyr_3232	0.40	+0.3
3,872,003	-		Psyr_3232	0.40	+1.1
3,872,038	+		Psyr_3232	0.44	-0.0
3,872,039	-		Psyr_3232	0.44	-0.5
3,872,273	-		Psyr_3232	0.65	-0.2
3,872,308	+		Psyr_3232	0.68	+0.4
3,872,308	+		Psyr_3232	0.68	-0.1
3,872,309	-		Psyr_3232	0.68	+1.4
3,872,309	-		Psyr_3232	0.68	+0.2
3,872,309	-		Psyr_3232	0.68	+0.9
3,872,309	-		Psyr_3232	0.68	+1.3
3,872,431	+		Psyr_3232	0.80	+1.2
3,872,432	-		Psyr_3232	0.80	-1.7
3,872,432	-		Psyr_3232	0.80	-1.2
3,872,432	-		Psyr_3232	0.80	+0.1
3,872,438	+		Psyr_3232	0.80	-0.4
3,872,438	+		Psyr_3232	0.80	+0.3
3,872,438	+		Psyr_3232	0.80	-0.3
3,872,438	+		Psyr_3232	0.80	+0.1
3,872,438	+		Psyr_3232	0.80	+0.2
3,872,438	+		Psyr_3232	0.80	+0.7
3,872,438	+		Psyr_3232	0.80	+1.0
3,872,438	+		Psyr_3232	0.80	-0.5