Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2646

Experiment: KB with Dimethyl Sulfoxide 1.25 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Dimethyl Sulfoxide 1.25 vol%
3,215,095	-				-0.8
3,215,095	-				+2.4
3,215,215	+		Psyr_2645	0.35	+0.4
3,215,240	-		Psyr_2645	0.42	-0.4
3,215,240	-		Psyr_2645	0.42	-1.3
3,215,240	-		Psyr_2645	0.42	+0.3
3,215,240	-		Psyr_2645	0.42	+0.2
3,215,240	-		Psyr_2645	0.42	+0.0
3,215,287	+		Psyr_2645	0.54	-0.1
3,215,287	+		Psyr_2645	0.54	-2.1
3,215,288	-		Psyr_2645	0.54	+0.6
3,215,288	-		Psyr_2645	0.54	-0.6
3,215,288	-		Psyr_2645	0.54	-0.7
3,215,288	-		Psyr_2645	0.54	+0.2
3,215,288	-		Psyr_2645	0.54	-1.2
3,215,288	-		Psyr_2645	0.54	-0.2
3,215,399	+		Psyr_2645	0.84	+0.1
3,215,399	+		Psyr_2645	0.84	+0.1
3,215,405	+		Psyr_2645	0.85	-0.8
3,215,405	+		Psyr_2645	0.85	-2.2
3,215,405	+		Psyr_2645	0.85	-0.0
3,215,405	+		Psyr_2645	0.85	+0.4
3,215,406	-		Psyr_2645	0.86	-0.2
3,215,646	+				-0.2
3,215,646	+				-0.5
3,215,646	+				-0.6
3,215,646	+				-0.4
3,215,646	+				+1.8
3,215,646	+				-1.0
3,215,646	+				+0.4
3,215,646	+				-1.3
3,215,646	+				-1.9
3,215,646	+				-0.9
3,215,646	+				-0.5
3,215,646	+				-0.3
3,215,646	+				-1.3
3,215,646	+				-0.3
3,215,647	-				+0.2
3,215,647	-				+0.7
3,215,647	-				-0.4
3,215,647	-				+0.9
3,215,647	-				+0.7
3,215,732	-				-0.0
3,215,746	-				+1.7
3,215,786	-				+1.0
3,216,027	+				-0.3
3,216,027	+				+1.8
3,216,027	+				+0.3
3,216,028	-				-0.3
3,216,047	+				+0.5
3,216,047	+				+0.1
3,216,047	+				+0.4
3,216,048	-				+1.0
3,216,048	-				-1.9
3,216,055	+				+0.5
3,216,164	+				-0.1
3,216,165	-				-2.3
3,216,165	-				+0.6
3,216,165	-				-2.2
3,216,165	-				-0.3
3,216,165	-				+0.0
3,216,165	-				-0.4
3,216,165	-				-2.2
3,216,165	-				+0.2
3,216,170	+				-0.4
3,216,171	-				-1.2
3,216,171	-				+1.4
3,216,171	-				+0.1
3,216,257	+				+0.9
3,216,257	+				+0.5
3,216,258	-				-0.2
3,216,328	-		Psyr_2646	0.11	+1.5
3,216,570	-		Psyr_2646	0.22	+0.2
3,216,638	+		Psyr_2646	0.25	+0.2
3,216,639	-		Psyr_2646	0.25	+0.5
3,216,639	-		Psyr_2646	0.25	+0.1
3,216,734	+		Psyr_2646	0.30	+3.6
3,216,735	-		Psyr_2646	0.30	+0.4
3,216,899	-		Psyr_2646	0.37	+1.5
3,216,899	-		Psyr_2646	0.37	+2.7
3,216,902	+		Psyr_2646	0.37	-0.1
3,216,902	+		Psyr_2646	0.37	+1.1
3,216,903	-		Psyr_2646	0.37	+1.5
3,216,903	-		Psyr_2646	0.37	+1.3
3,216,903	-		Psyr_2646	0.37	+0.6
3,216,903	-		Psyr_2646	0.37	+1.7
3,217,132	+		Psyr_2646	0.48	+0.6
3,217,139	+		Psyr_2646	0.48	+0.4
3,217,139	+		Psyr_2646	0.48	+1.3
3,217,139	+		Psyr_2646	0.48	+0.9
3,217,164	+		Psyr_2646	0.49	-1.9
3,217,165	-		Psyr_2646	0.49	-0.1
3,217,266	+		Psyr_2646	0.54	+0.6
3,217,353	+		Psyr_2646	0.58	-0.7
3,217,353	+		Psyr_2646	0.58	+2.0
3,217,353	+		Psyr_2646	0.58	+0.8
3,217,353	+		Psyr_2646	0.58	+0.6
3,217,353	+		Psyr_2646	0.58	+0.5
3,217,353	+		Psyr_2646	0.58	-0.4
3,217,353	+		Psyr_2646	0.58	+1.2
3,217,353	+		Psyr_2646	0.58	-1.0
3,217,354	-		Psyr_2646	0.58	-1.9
3,217,354	-		Psyr_2646	0.58	+1.0
3,217,354	-		Psyr_2646	0.58	-1.9
3,217,354	-		Psyr_2646	0.58	-0.2
3,217,354	-				+1.0
3,217,354	-		Psyr_2646	0.58	-1.6
3,217,354	-		Psyr_2646	0.58	+0.7
3,217,354	-		Psyr_2646	0.58	+1.4
3,217,354	-		Psyr_2646	0.58	+2.4
3,217,354	-		Psyr_2646	0.58	+0.1
3,217,414	-		Psyr_2646	0.61	-0.0
3,217,459	-		Psyr_2646	0.63	+0.3
3,217,469	-		Psyr_2646	0.63	+0.4
3,217,524	-		Psyr_2646	0.66	+1.1
3,217,524	-		Psyr_2646	0.66	+0.4
3,217,689	+		Psyr_2646	0.74	+0.9
3,217,820	+		Psyr_2646	0.80	+0.4
3,217,820	+		Psyr_2646	0.80	-0.2
3,217,820	+		Psyr_2646	0.80	+0.4
3,217,820	+		Psyr_2646	0.80	+0.3
3,217,820	+		Psyr_2646	0.80	+0.9
3,217,820	+		Psyr_2646	0.80	+0.9
3,217,821	-		Psyr_2646	0.80	-0.0
3,217,821	-		Psyr_2646	0.80	-0.7
3,217,821	-		Psyr_2646	0.80	+0.1
3,217,821	-		Psyr_2646	0.80	+1.0
3,217,821	-		Psyr_2646	0.80	+1.2
3,217,821	-		Psyr_2646	0.80	-0.2
3,217,821	-		Psyr_2646	0.80	+1.2
3,217,821	-		Psyr_2646	0.80	+1.4
3,217,821	-		Psyr_2646	0.80	+1.9
3,217,821	-		Psyr_2646	0.80	-0.6
3,217,859	+		Psyr_2646	0.81	-0.1
3,217,907	+		Psyr_2646	0.84	+1.8
3,217,908	-		Psyr_2646	0.84	+1.9
3,217,908	-		Psyr_2646	0.84	-2.2
3,217,935	+		Psyr_2646	0.85	+0.9
3,217,936	-		Psyr_2646	0.85	-0.4
3,217,945	+		Psyr_2646	0.85	+0.6
3,217,945	+		Psyr_2646	0.85	+2.6
3,217,946	-		Psyr_2646	0.85	-0.8
3,218,295	+				+1.3
3,218,296	-				+0.8
3,218,327	+				-2.2
3,218,327	+				+0.8
3,218,328	-				-2.0
3,218,328	-				+0.8
3,218,328	-				+0.5
3,218,328	-				-0.5
3,218,379	+				+1.6
3,218,457	-		Psyr_2647	0.12	-0.7
3,218,457	-		Psyr_2647	0.12	-1.9
3,218,457	-		Psyr_2647	0.12	+0.9
3,218,492	+		Psyr_2647	0.16	+1.3
3,218,492	+		Psyr_2647	0.16	+0.8
3,218,493	-		Psyr_2647	0.16	+0.6
3,218,549	+		Psyr_2647	0.22	-0.2
3,218,550	-		Psyr_2647	0.22	-2.1
3,218,577	-		Psyr_2647	0.26	+0.4
3,218,577	-		Psyr_2647	0.26	+0.8
3,218,790	-		Psyr_2647	0.50	-0.5
3,218,806	+		Psyr_2647	0.51	+0.7
3,218,806	+		Psyr_2647	0.51	-0.6
3,218,806	+		Psyr_2647	0.51	+1.8
3,218,806	+		Psyr_2647	0.51	+1.2
3,218,825	+		Psyr_2647	0.54	+0.8
3,218,825	+		Psyr_2647	0.54	+0.5
3,218,826	-		Psyr_2647	0.54	+0.4
3,218,826	-		Psyr_2647	0.54	+0.5
3,218,826	-		Psyr_2647	0.54	+0.1
3,218,826	-		Psyr_2647	0.54	-0.3
3,218,909	+		Psyr_2647	0.63	-0.4
3,218,910	-		Psyr_2647	0.63	+0.4
3,218,985	+				+4.2
3,218,985	+		Psyr_2647	0.72	+0.6
3,218,986	-		Psyr_2647	0.72	-1.3
3,218,986	-		Psyr_2647	0.72	-0.6
3,218,986	-		Psyr_2647	0.72	-1.1
3,219,012	-		Psyr_2647	0.75	+0.8
3,219,041	-		Psyr_2647	0.78	-0.4
3,219,095	-		Psyr_2647	0.84	-0.7
3,219,235	+				+1.4