Experiment: KB with Dimethyl Sulfoxide 1.25 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_2495 and Psyr_2496 are separated by 374 nucleotides Psyr_2496 and Psyr_2497 are separated by 884 nucleotides
Psyr_2495: Psyr_2495 - ABC transporter, at 2,905,473 to 2,907,062
_2495
Psyr_2496: Psyr_2496 - lipopolysaccharide core biosynthesis domain protein, at 2,907,437 to 2,908,273
_2496
Psyr_2497: Psyr_2497 - lipoprotein, putative, at 2,909,158 to 2,909,859
_2497
Position (kb)
2907
2908
2909 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2906.756 kb on - strand, within Psyr_2495 at 2906.756 kb on - strand, within Psyr_2495 at 2906.756 kb on - strand, within Psyr_2495 at 2906.836 kb on + strand, within Psyr_2495 at 2907.047 kb on + strand at 2907.073 kb on + strand at 2907.188 kb on + strand at 2907.188 kb on + strand at 2907.188 kb on + strand at 2907.189 kb on - strand at 2907.189 kb on - strand at 2907.189 kb on - strand at 2907.194 kb on + strand at 2907.194 kb on + strand at 2907.195 kb on - strand at 2907.438 kb on + strand at 2907.464 kb on - strand at 2907.604 kb on - strand, within Psyr_2496 at 2907.651 kb on + strand, within Psyr_2496 at 2907.651 kb on + strand, within Psyr_2496 at 2907.718 kb on - strand, within Psyr_2496 at 2907.738 kb on + strand, within Psyr_2496 at 2907.738 kb on + strand, within Psyr_2496 at 2907.738 kb on + strand, within Psyr_2496 at 2907.738 kb on + strand, within Psyr_2496 at 2907.739 kb on - strand, within Psyr_2496 at 2907.739 kb on - strand, within Psyr_2496 at 2907.739 kb on - strand, within Psyr_2496 at 2907.808 kb on + strand, within Psyr_2496 at 2907.809 kb on - strand, within Psyr_2496 at 2907.953 kb on + strand, within Psyr_2496 at 2907.953 kb on + strand, within Psyr_2496 at 2907.953 kb on + strand, within Psyr_2496 at 2908.029 kb on + strand, within Psyr_2496 at 2908.029 kb on + strand, within Psyr_2496 at 2908.029 kb on + strand, within Psyr_2496 at 2908.029 kb on + strand, within Psyr_2496 at 2908.030 kb on - strand, within Psyr_2496 at 2908.030 kb on - strand, within Psyr_2496 at 2908.030 kb on - strand, within Psyr_2496 at 2908.030 kb on - strand, within Psyr_2496 at 2908.043 kb on + strand, within Psyr_2496 at 2908.084 kb on + strand, within Psyr_2496 at 2908.239 kb on - strand at 2908.239 kb on - strand at 2908.239 kb on - strand at 2908.242 kb on + strand at 2908.243 kb on - strand at 2908.285 kb on - strand at 2908.302 kb on + strand at 2908.303 kb on - strand at 2908.303 kb on - strand at 2908.316 kb on + strand at 2908.345 kb on + strand at 2908.374 kb on + strand at 2908.375 kb on - strand at 2908.375 kb on - strand at 2908.400 kb on + strand at 2908.400 kb on + strand at 2908.401 kb on - strand at 2908.401 kb on - strand at 2908.401 kb on - strand at 2908.453 kb on + strand at 2908.453 kb on + strand at 2908.453 kb on + strand at 2908.453 kb on + strand at 2908.454 kb on - strand at 2908.454 kb on - strand at 2908.454 kb on - strand at 2908.454 kb on - strand at 2908.454 kb on - strand at 2908.454 kb on - strand at 2908.454 kb on - strand at 2908.479 kb on - strand at 2908.546 kb on + strand at 2908.546 kb on + strand at 2908.546 kb on + strand at 2908.546 kb on + strand at 2908.546 kb on + strand at 2908.546 kb on + strand at 2908.547 kb on - strand at 2908.547 kb on - strand at 2908.547 kb on - strand at 2908.576 kb on - strand at 2908.588 kb on - strand at 2908.824 kb on + strand at 2908.824 kb on + strand at 2908.825 kb on - strand at 2908.825 kb on - strand at 2908.825 kb on - strand at 2909.044 kb on + strand at 2909.044 kb on + strand at 2909.044 kb on + strand at 2909.044 kb on + strand at 2909.044 kb on + strand at 2909.044 kb on + strand at 2909.045 kb on - strand at 2909.045 kb on - strand at 2909.067 kb on + strand at 2909.068 kb on - strand at 2909.068 kb on - strand at 2909.068 kb on - strand at 2909.068 kb on - strand at 2909.068 kb on - strand at 2909.088 kb on + strand at 2909.088 kb on + strand at 2909.088 kb on + strand at 2909.088 kb on + strand at 2909.088 kb on + strand at 2909.088 kb on + strand at 2909.088 kb on + strand at 2909.088 kb on + strand at 2909.088 kb on + strand at 2909.088 kb on + strand at 2909.089 kb on - strand at 2909.089 kb on - strand at 2909.089 kb on - strand at 2909.090 kb on + strand at 2909.090 kb on + strand at 2909.090 kb on + strand at 2909.090 kb on + strand at 2909.091 kb on - strand at 2909.091 kb on - strand at 2909.091 kb on - strand at 2909.091 kb on - strand at 2909.091 kb on - strand at 2909.091 kb on - strand at 2909.091 kb on - strand at 2909.091 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Dimethyl Sulfoxide 1.25 vol% remove 2,906,756 - Psyr_2495 0.81 +1.0 2,906,756 - Psyr_2495 0.81 +0.4 2,906,756 - Psyr_2495 0.81 +0.0 2,906,836 + Psyr_2495 0.86 -0.3 2,907,047 + +3.6 2,907,073 + +0.2 2,907,188 + -2.1 2,907,188 + -0.9 2,907,188 + -0.8 2,907,189 - +2.3 2,907,189 - -0.2 2,907,189 - +0.4 2,907,194 + -0.1 2,907,194 + -1.8 2,907,195 - +1.0 2,907,438 + -0.6 2,907,464 - -0.2 2,907,604 - Psyr_2496 0.20 +0.3 2,907,651 + Psyr_2496 0.26 -0.3 2,907,651 + Psyr_2496 0.26 -1.1 2,907,718 - Psyr_2496 0.34 -0.4 2,907,738 + Psyr_2496 0.36 -1.4 2,907,738 + Psyr_2496 0.36 -0.8 2,907,738 + Psyr_2496 0.36 -0.7 2,907,738 + Psyr_2496 0.36 -2.5 2,907,739 - Psyr_2496 0.36 +1.1 2,907,739 - Psyr_2496 0.36 -1.0 2,907,739 - Psyr_2496 0.36 -1.1 2,907,808 + Psyr_2496 0.44 -0.6 2,907,809 - Psyr_2496 0.44 -1.7 2,907,953 + Psyr_2496 0.62 -0.5 2,907,953 + Psyr_2496 0.62 +0.4 2,907,953 + Psyr_2496 0.62 +0.3 2,908,029 + Psyr_2496 0.71 -1.0 2,908,029 + Psyr_2496 0.71 -0.1 2,908,029 + Psyr_2496 0.71 -0.5 2,908,029 + Psyr_2496 0.71 +0.7 2,908,030 - Psyr_2496 0.71 +1.2 2,908,030 - Psyr_2496 0.71 +0.7 2,908,030 - Psyr_2496 0.71 -2.4 2,908,030 - Psyr_2496 0.71 +0.7 2,908,043 + Psyr_2496 0.72 -1.4 2,908,084 + Psyr_2496 0.77 +0.1 2,908,239 - +0.2 2,908,239 - -1.3 2,908,239 - +0.2 2,908,242 + +0.1 2,908,243 - +0.3 2,908,285 - -0.1 2,908,302 + -0.5 2,908,303 - +0.2 2,908,303 - -1.3 2,908,316 + +1.2 2,908,345 + -0.3 2,908,374 + -0.2 2,908,375 - -0.2 2,908,375 - +0.2 2,908,400 + +1.6 2,908,400 + -0.2 2,908,401 - -0.3 2,908,401 - -1.9 2,908,401 - +1.9 2,908,453 + -0.2 2,908,453 + -0.2 2,908,453 + -1.8 2,908,453 + +0.7 2,908,454 - +0.7 2,908,454 - +2.0 2,908,454 - +0.2 2,908,454 - +0.7 2,908,454 - -0.4 2,908,454 - -0.3 2,908,454 - -0.3 2,908,479 - -0.3 2,908,546 + +1.7 2,908,546 + +1.0 2,908,546 + +0.7 2,908,546 + +0.4 2,908,546 + -0.8 2,908,546 + +0.1 2,908,547 - -0.7 2,908,547 - +0.1 2,908,547 - +0.6 2,908,576 - -1.5 2,908,588 - -1.5 2,908,824 + -0.7 2,908,824 + -0.3 2,908,825 - +1.8 2,908,825 - +0.0 2,908,825 - +2.5 2,909,044 + +0.8 2,909,044 + +1.0 2,909,044 + -0.2 2,909,044 + +1.1 2,909,044 + -0.7 2,909,044 + -1.7 2,909,045 - +0.6 2,909,045 - -2.5 2,909,067 + -1.1 2,909,068 - -0.1 2,909,068 - +0.7 2,909,068 - +0.5 2,909,068 - +0.1 2,909,068 - +0.1 2,909,088 + +0.0 2,909,088 + +0.9 2,909,088 + -1.3 2,909,088 + -0.1 2,909,088 + -0.3 2,909,088 + +1.7 2,909,088 + -1.7 2,909,088 + +0.8 2,909,088 + -1.7 2,909,088 + -2.1 2,909,089 - +0.5 2,909,089 - +2.6 2,909,089 - +0.7 2,909,090 + +0.7 2,909,090 + -0.7 2,909,090 + +0.5 2,909,090 + -0.1 2,909,091 - +1.2 2,909,091 - +1.7 2,909,091 - +0.8 2,909,091 - +0.8 2,909,091 - +0.1 2,909,091 - +0.5 2,909,091 - -0.0 2,909,091 - +0.3
Or see this region's nucleotide sequence