Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2452

Experiment: KB with Dimethyl Sulfoxide 1.25 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Dimethyl Sulfoxide 1.25 vol%
2,839,828	+		Psyr_2451	0.51	+0.1
2,839,930	+		Psyr_2451	0.58	-0.0
2,839,931	-		Psyr_2451	0.58	-2.3
2,839,966	+		Psyr_2451	0.60	-0.4
2,839,966	+		Psyr_2451	0.60	+0.1
2,839,966	+		Psyr_2451	0.60	-0.0
2,839,967	-		Psyr_2451	0.60	-0.4
2,839,970	+		Psyr_2451	0.61	+1.3
2,839,970	+		Psyr_2451	0.61	-0.8
2,839,970	+		Psyr_2451	0.61	-0.3
2,839,971	-		Psyr_2451	0.61	-1.0
2,839,994	+		Psyr_2451	0.62	+0.8
2,840,086	+		Psyr_2451	0.68	+0.3
2,840,117	-		Psyr_2451	0.70	-1.5
2,840,245	+		Psyr_2451	0.79	+0.2
2,840,245	+		Psyr_2451	0.79	-0.4
2,840,245	+		Psyr_2451	0.79	-0.1
2,840,245	+		Psyr_2451	0.79	-0.0
2,840,246	-		Psyr_2451	0.79	-1.0
2,840,306	+		Psyr_2451	0.83	+1.6
2,840,307	-		Psyr_2451	0.83	+0.4
2,840,307	-		Psyr_2451	0.83	+0.9
2,840,312	+		Psyr_2451	0.84	+0.4
2,840,312	+		Psyr_2451	0.84	+0.7
2,840,312	+		Psyr_2451	0.84	-0.4
2,840,312	+		Psyr_2451	0.84	+0.7
2,840,313	-		Psyr_2451	0.84	-1.3
2,840,313	-		Psyr_2451	0.84	-0.2
2,840,313	-		Psyr_2451	0.84	-0.4
2,840,386	+		Psyr_2451	0.89	-1.9
2,840,386	+		Psyr_2451	0.89	+0.7
2,840,386	+		Psyr_2451	0.89	+0.3
2,840,386	+		Psyr_2451	0.89	+1.0
2,840,386	+		Psyr_2451	0.89	-1.3
2,840,387	-		Psyr_2451	0.89	-0.0
2,840,387	-		Psyr_2451	0.89	+0.1
2,840,387	-		Psyr_2451	0.89	-1.3
2,840,387	-		Psyr_2451	0.89	-0.5
2,840,395	-		Psyr_2451	0.89	-0.6
2,840,549	+				+1.0
2,840,549	+				+0.4
2,840,550	-				+0.1
2,840,558	-				-0.3
2,840,558	-				+0.7
2,840,592	-				+1.0
2,840,657	+				+1.6
2,840,658	-				+1.2
2,840,658	-				-0.7
2,840,659	+				-1.1
2,840,660	-				-0.3
2,840,731	+				-0.7
2,840,733	+				-0.1
2,840,733	+				+0.3
2,840,733	+				+1.1
2,840,734	-				+0.0
2,840,734	-				-1.5
2,840,734	-				+1.3
2,840,734	-				+1.8
2,840,827	+				-0.5
2,840,827	+				+0.6
2,840,828	-				+0.4
2,840,905	+		Psyr_2452	0.16	+0.3
2,841,292	-		Psyr_2452	0.64	+0.2
2,841,453	+		Psyr_2452	0.83	+1.0
2,841,453	+		Psyr_2452	0.83	+0.2
2,841,453	+		Psyr_2452	0.83	+0.7
2,841,453	+		Psyr_2452	0.83	+0.6
2,841,453	+		Psyr_2452	0.83	-0.4
2,841,453	+		Psyr_2452	0.83	+0.3
2,841,453	+		Psyr_2452	0.83	+1.3
2,841,453	+		Psyr_2452	0.83	+0.6
2,841,453	+		Psyr_2452	0.83	-0.0
2,841,454	-		Psyr_2452	0.84	+1.1
2,841,454	-		Psyr_2452	0.84	+1.1
2,841,454	-		Psyr_2452	0.84	+0.3
2,841,454	-		Psyr_2452	0.84	+0.6
2,841,454	-		Psyr_2452	0.84	+0.8
2,841,454	-		Psyr_2452	0.84	-0.2
2,841,454	-		Psyr_2452	0.84	-1.7
2,841,454	-		Psyr_2452	0.84	+0.1
2,841,454	-		Psyr_2452	0.84	+1.2
2,841,588	+				+0.2
2,841,588	+				+1.1
2,841,588	+				+0.3
2,841,588	+				-0.1
2,841,588	+				-0.8
2,841,588	+				+0.6
2,841,589	-				-1.4
2,841,589	-				+0.1
2,841,589	-				+0.8
2,841,589	-				-1.0
2,841,589	-				-1.0
2,841,589	-				-0.6
2,841,589	-				+1.0
2,841,624	+				-2.4
2,841,624	+				-0.5
2,841,624	+				+0.0
2,841,625	-				-1.0
2,841,625	-				-0.3
2,841,818	+		Psyr_2453	0.23	-1.1
2,841,818	+		Psyr_2453	0.23	+1.0
2,841,818	+		Psyr_2453	0.23	+1.3
2,841,819	-		Psyr_2453	0.23	+0.6
2,841,819	-		Psyr_2453	0.23	+1.3
2,842,052	-		Psyr_2453	0.51	+0.8
2,842,133	+		Psyr_2453	0.61	-0.5
2,842,133	+		Psyr_2453	0.61	+1.0
2,842,133	+		Psyr_2453	0.61	+0.6
2,842,133	+		Psyr_2453	0.61	-0.7
2,842,133	+		Psyr_2453	0.61	+1.3
2,842,133	+		Psyr_2453	0.61	+0.5
2,842,134	-		Psyr_2453	0.61	+0.3
2,842,134	-		Psyr_2453	0.61	-1.0
2,842,134	-		Psyr_2453	0.61	-1.1
2,842,134	-		Psyr_2453	0.61	-1.5
2,842,134	-		Psyr_2453	0.61	-1.2
2,842,134	-		Psyr_2453	0.61	+0.5
2,842,416	-				-0.3
2,842,416	-				+0.3
2,842,461	-				+0.5
2,842,466	+				+0.7
2,842,548	+		Psyr_2454	0.14	-0.6
2,842,548	+		Psyr_2454	0.14	-0.2
2,842,549	-		Psyr_2454	0.14	-0.8
2,842,549	-		Psyr_2454	0.14	-0.9
2,842,549	-		Psyr_2454	0.14	-0.5