Experiment: KB with Dimethyl Sulfoxide 1.25 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_2302 and Psyr_2303 overlap by 4 nucleotides Psyr_2303 and Psyr_2304 are separated by 672 nucleotides
Psyr_2302: Psyr_2302 - FAD linked oxidase, N-terminal, at 2,675,146 to 2,676,462
_2302
Psyr_2303: Psyr_2303 - UbiA prenyltransferase, at 2,676,459 to 2,677,910
_2303
Psyr_2304: Psyr_2304 - General substrate transporter:Major facilitator superfamily, at 2,678,583 to 2,680,001
_2304
Position (kb)
2676
2677
2678 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2675.580 kb on - strand, within Psyr_2302 at 2675.765 kb on + strand, within Psyr_2302 at 2675.765 kb on + strand, within Psyr_2302 at 2675.822 kb on + strand, within Psyr_2302 at 2675.822 kb on + strand, within Psyr_2302 at 2675.822 kb on + strand, within Psyr_2302 at 2675.856 kb on + strand, within Psyr_2302 at 2675.892 kb on + strand, within Psyr_2302 at 2675.892 kb on + strand, within Psyr_2302 at 2675.892 kb on + strand, within Psyr_2302 at 2676.100 kb on + strand, within Psyr_2302 at 2676.100 kb on + strand, within Psyr_2302 at 2676.100 kb on + strand, within Psyr_2302 at 2676.100 kb on + strand, within Psyr_2302 at 2676.100 kb on + strand, within Psyr_2302 at 2676.100 kb on + strand, within Psyr_2302 at 2676.100 kb on + strand, within Psyr_2302 at 2676.100 kb on + strand, within Psyr_2302 at 2676.100 kb on + strand, within Psyr_2302 at 2676.101 kb on - strand, within Psyr_2302 at 2676.135 kb on - strand, within Psyr_2302 at 2676.135 kb on - strand, within Psyr_2302 at 2676.135 kb on - strand, within Psyr_2302 at 2676.135 kb on - strand, within Psyr_2302 at 2676.280 kb on + strand, within Psyr_2302 at 2676.281 kb on - strand, within Psyr_2302 at 2676.375 kb on - strand at 2676.447 kb on - strand at 2676.447 kb on - strand at 2676.447 kb on - strand at 2676.637 kb on + strand, within Psyr_2303 at 2676.638 kb on - strand, within Psyr_2303 at 2676.667 kb on + strand, within Psyr_2303 at 2676.668 kb on - strand, within Psyr_2303 at 2676.668 kb on - strand, within Psyr_2303 at 2676.668 kb on - strand, within Psyr_2303 at 2676.668 kb on - strand, within Psyr_2303 at 2676.745 kb on + strand, within Psyr_2303 at 2676.911 kb on + strand, within Psyr_2303 at 2676.911 kb on + strand, within Psyr_2303 at 2676.913 kb on + strand, within Psyr_2303 at 2676.913 kb on + strand, within Psyr_2303 at 2676.914 kb on - strand, within Psyr_2303 at 2676.914 kb on - strand, within Psyr_2303 at 2676.914 kb on - strand, within Psyr_2303 at 2676.914 kb on - strand, within Psyr_2303 at 2676.914 kb on - strand, within Psyr_2303 at 2676.988 kb on + strand, within Psyr_2303 at 2676.991 kb on + strand, within Psyr_2303 at 2676.992 kb on - strand, within Psyr_2303 at 2677.068 kb on + strand, within Psyr_2303 at 2677.069 kb on - strand, within Psyr_2303 at 2677.177 kb on + strand, within Psyr_2303 at 2677.177 kb on + strand, within Psyr_2303 at 2677.177 kb on + strand, within Psyr_2303 at 2677.178 kb on - strand, within Psyr_2303 at 2677.178 kb on - strand, within Psyr_2303 at 2677.178 kb on - strand, within Psyr_2303 at 2677.178 kb on - strand, within Psyr_2303 at 2677.179 kb on + strand, within Psyr_2303 at 2677.179 kb on + strand, within Psyr_2303 at 2677.179 kb on + strand, within Psyr_2303 at 2677.179 kb on + strand, within Psyr_2303 at 2677.179 kb on + strand, within Psyr_2303 at 2677.179 kb on + strand, within Psyr_2303 at 2677.179 kb on + strand, within Psyr_2303 at 2677.179 kb on + strand, within Psyr_2303 at 2677.179 kb on + strand, within Psyr_2303 at 2677.179 kb on + strand, within Psyr_2303 at 2677.179 kb on + strand, within Psyr_2303 at 2677.180 kb on - strand, within Psyr_2303 at 2677.180 kb on - strand, within Psyr_2303 at 2677.180 kb on - strand, within Psyr_2303 at 2677.180 kb on - strand, within Psyr_2303 at 2677.180 kb on - strand, within Psyr_2303 at 2677.180 kb on - strand, within Psyr_2303 at 2677.475 kb on - strand, within Psyr_2303 at 2677.475 kb on - strand, within Psyr_2303 at 2677.496 kb on - strand, within Psyr_2303 at 2677.520 kb on + strand, within Psyr_2303 at 2677.520 kb on + strand, within Psyr_2303 at 2677.545 kb on - strand, within Psyr_2303 at 2677.640 kb on + strand, within Psyr_2303 at 2677.641 kb on - strand, within Psyr_2303 at 2677.666 kb on + strand, within Psyr_2303 at 2677.666 kb on + strand, within Psyr_2303 at 2677.666 kb on + strand, within Psyr_2303 at 2677.667 kb on - strand, within Psyr_2303 at 2677.667 kb on - strand, within Psyr_2303 at 2677.803 kb on - strand at 2677.874 kb on + strand at 2677.875 kb on - strand at 2677.875 kb on - strand at 2677.875 kb on - strand at 2677.875 kb on - strand at 2677.875 kb on - strand at 2677.875 kb on - strand at 2677.914 kb on + strand at 2677.914 kb on + strand at 2677.914 kb on + strand at 2677.914 kb on + strand at 2677.914 kb on + strand at 2678.056 kb on + strand at 2678.057 kb on - strand at 2678.299 kb on + strand at 2678.299 kb on + strand at 2678.299 kb on + strand at 2678.299 kb on + strand at 2678.299 kb on + strand at 2678.299 kb on + strand at 2678.299 kb on + strand at 2678.299 kb on + strand at 2678.301 kb on + strand at 2678.301 kb on + strand at 2678.301 kb on + strand at 2678.301 kb on + strand at 2678.302 kb on - strand at 2678.302 kb on - strand at 2678.302 kb on - strand at 2678.398 kb on + strand at 2678.399 kb on - strand at 2678.399 kb on - strand at 2678.400 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Dimethyl Sulfoxide 1.25 vol% remove 2,675,580 - Psyr_2302 0.33 +0.8 2,675,765 + Psyr_2302 0.47 -1.1 2,675,765 + Psyr_2302 0.47 +1.1 2,675,822 + Psyr_2302 0.51 +0.0 2,675,822 + Psyr_2302 0.51 -1.2 2,675,822 + Psyr_2302 0.51 +0.6 2,675,856 + Psyr_2302 0.54 -0.2 2,675,892 + Psyr_2302 0.57 -0.2 2,675,892 + Psyr_2302 0.57 +0.5 2,675,892 + Psyr_2302 0.57 +1.7 2,676,100 + Psyr_2302 0.72 -1.5 2,676,100 + Psyr_2302 0.72 -0.9 2,676,100 + Psyr_2302 0.72 -0.7 2,676,100 + Psyr_2302 0.72 +0.0 2,676,100 + Psyr_2302 0.72 -1.2 2,676,100 + Psyr_2302 0.72 -2.3 2,676,100 + Psyr_2302 0.72 -0.1 2,676,100 + Psyr_2302 0.72 -0.2 2,676,100 + Psyr_2302 0.72 -0.4 2,676,101 - Psyr_2302 0.73 -0.6 2,676,135 - Psyr_2302 0.75 -1.4 2,676,135 - Psyr_2302 0.75 +3.6 2,676,135 - Psyr_2302 0.75 +0.2 2,676,135 - Psyr_2302 0.75 +0.4 2,676,280 + Psyr_2302 0.86 -0.9 2,676,281 - Psyr_2302 0.86 -1.6 2,676,375 - +0.6 2,676,447 - +1.3 2,676,447 - -0.2 2,676,447 - -0.3 2,676,637 + Psyr_2303 0.12 +1.3 2,676,638 - Psyr_2303 0.12 -1.1 2,676,667 + Psyr_2303 0.14 -0.3 2,676,668 - Psyr_2303 0.14 -0.1 2,676,668 - Psyr_2303 0.14 -1.1 2,676,668 - Psyr_2303 0.14 +0.8 2,676,668 - Psyr_2303 0.14 +0.6 2,676,745 + Psyr_2303 0.20 -0.7 2,676,911 + Psyr_2303 0.31 -0.2 2,676,911 + Psyr_2303 0.31 -0.0 2,676,913 + Psyr_2303 0.31 -0.5 2,676,913 + Psyr_2303 0.31 +0.3 2,676,914 - Psyr_2303 0.31 -0.5 2,676,914 - Psyr_2303 0.31 +1.3 2,676,914 - Psyr_2303 0.31 +1.6 2,676,914 - Psyr_2303 0.31 -0.3 2,676,914 - Psyr_2303 0.31 -0.5 2,676,988 + Psyr_2303 0.36 +1.8 2,676,991 + Psyr_2303 0.37 +0.9 2,676,992 - Psyr_2303 0.37 -0.5 2,677,068 + Psyr_2303 0.42 +0.9 2,677,069 - Psyr_2303 0.42 +0.7 2,677,177 + Psyr_2303 0.49 -0.9 2,677,177 + Psyr_2303 0.49 +0.5 2,677,177 + Psyr_2303 0.49 +0.6 2,677,178 - Psyr_2303 0.50 +0.6 2,677,178 - Psyr_2303 0.50 +0.0 2,677,178 - Psyr_2303 0.50 -0.7 2,677,178 - Psyr_2303 0.50 +0.0 2,677,179 + Psyr_2303 0.50 +1.0 2,677,179 + Psyr_2303 0.50 +0.9 2,677,179 + Psyr_2303 0.50 -0.2 2,677,179 + Psyr_2303 0.50 -0.7 2,677,179 + Psyr_2303 0.50 -0.1 2,677,179 + Psyr_2303 0.50 -0.6 2,677,179 + Psyr_2303 0.50 -1.5 2,677,179 + Psyr_2303 0.50 -0.5 2,677,179 + Psyr_2303 0.50 -1.2 2,677,179 + Psyr_2303 0.50 +0.3 2,677,179 + Psyr_2303 0.50 +1.7 2,677,180 - Psyr_2303 0.50 -1.0 2,677,180 - Psyr_2303 0.50 +1.1 2,677,180 - Psyr_2303 0.50 +1.7 2,677,180 - Psyr_2303 0.50 -0.3 2,677,180 - Psyr_2303 0.50 -0.3 2,677,180 - Psyr_2303 0.50 -0.2 2,677,475 - Psyr_2303 0.70 +2.7 2,677,475 - Psyr_2303 0.70 +1.1 2,677,496 - Psyr_2303 0.71 +0.4 2,677,520 + Psyr_2303 0.73 +0.4 2,677,520 + Psyr_2303 0.73 +0.6 2,677,545 - Psyr_2303 0.75 -1.5 2,677,640 + Psyr_2303 0.81 -0.5 2,677,641 - Psyr_2303 0.81 +0.1 2,677,666 + Psyr_2303 0.83 -2.1 2,677,666 + Psyr_2303 0.83 +2.8 2,677,666 + Psyr_2303 0.83 +0.3 2,677,667 - Psyr_2303 0.83 +0.5 2,677,667 - Psyr_2303 0.83 +0.5 2,677,803 - -0.4 2,677,874 + -2.5 2,677,875 - -0.1 2,677,875 - -0.7 2,677,875 - +0.9 2,677,875 - +0.1 2,677,875 - -0.3 2,677,875 - -0.0 2,677,914 + +0.3 2,677,914 + -0.2 2,677,914 + +1.5 2,677,914 + -1.3 2,677,914 + +0.1 2,678,056 + +1.3 2,678,057 - +1.3 2,678,299 + -0.4 2,678,299 + -0.3 2,678,299 + -0.1 2,678,299 + -0.2 2,678,299 + +0.9 2,678,299 + +0.2 2,678,299 + -0.5 2,678,299 + -0.3 2,678,301 + -1.3 2,678,301 + -0.1 2,678,301 + +0.8 2,678,301 + +0.7 2,678,302 - -0.9 2,678,302 - +0.5 2,678,302 - -0.1 2,678,398 + +0.5 2,678,399 - -0.3 2,678,399 - +0.7 2,678,400 + +0.5
Or see this region's nucleotide sequence