Experiment: KB with Dimethyl Sulfoxide 1.25 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_0492 and Psyr_0493 overlap by 8 nucleotides Psyr_0493 and Psyr_0494 are separated by 121 nucleotides
Psyr_0492: Psyr_0492 - Response regulator receiver:CheW-like protein:ATP-binding region, ATPase-like:Hpt, at 528,991 to 534,969
_0492
Psyr_0493: Psyr_0493 - CheW-like protein, at 534,962 to 535,432
_0493
Psyr_0494: Psyr_0494 - Protein of unknown function UPF0061, at 535,554 to 537,017
_0494
Position (kb) 534
535
536 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 534.166 kb on + strand, within Psyr_0492 at 534.167 kb on - strand, within Psyr_0492 at 534.183 kb on + strand, within Psyr_0492 at 534.229 kb on + strand, within Psyr_0492 at 534.259 kb on + strand, within Psyr_0492 at 534.645 kb on + strand at 534.898 kb on + strand at 534.899 kb on - strand at 535.115 kb on + strand, within Psyr_0493 at 535.313 kb on + strand, within Psyr_0493 at 535.313 kb on + strand, within Psyr_0493 at 535.313 kb on + strand, within Psyr_0493 at 535.314 kb on - strand, within Psyr_0493 at 535.314 kb on - strand, within Psyr_0493 at 535.430 kb on + strand at 535.430 kb on + strand at 535.430 kb on + strand at 535.431 kb on - strand at 535.435 kb on - strand at 535.486 kb on + strand at 535.486 kb on + strand at 535.486 kb on + strand at 535.487 kb on - strand at 535.490 kb on + strand at 535.540 kb on - strand at 535.720 kb on + strand, within Psyr_0494 at 535.720 kb on + strand, within Psyr_0494 at 535.720 kb on + strand, within Psyr_0494 at 535.720 kb on + strand, within Psyr_0494 at 535.720 kb on + strand, within Psyr_0494 at 535.720 kb on + strand, within Psyr_0494 at 535.721 kb on - strand, within Psyr_0494 at 535.721 kb on - strand, within Psyr_0494 at 535.735 kb on + strand, within Psyr_0494 at 535.736 kb on - strand, within Psyr_0494 at 535.736 kb on - strand, within Psyr_0494 at 535.802 kb on + strand, within Psyr_0494 at 535.921 kb on + strand, within Psyr_0494 at 535.921 kb on + strand, within Psyr_0494 at 535.921 kb on + strand, within Psyr_0494 at 535.921 kb on + strand, within Psyr_0494 at 535.922 kb on - strand, within Psyr_0494 at 536.026 kb on + strand, within Psyr_0494 at 536.027 kb on - strand, within Psyr_0494 at 536.038 kb on + strand, within Psyr_0494 at 536.241 kb on - strand, within Psyr_0494 at 536.293 kb on + strand, within Psyr_0494 at 536.294 kb on - strand, within Psyr_0494 at 536.356 kb on + strand, within Psyr_0494
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Dimethyl Sulfoxide 1.25 vol% remove 534,166 + Psyr_0492 0.87 -1.0 534,167 - Psyr_0492 0.87 +1.0 534,183 + Psyr_0492 0.87 -0.9 534,229 + Psyr_0492 0.88 -0.4 534,259 + Psyr_0492 0.88 -0.8 534,645 + -0.1 534,898 + -1.7 534,899 - +0.9 535,115 + Psyr_0493 0.32 +1.3 535,313 + Psyr_0493 0.75 -1.0 535,313 + Psyr_0493 0.75 -3.2 535,313 + Psyr_0493 0.75 +0.3 535,314 - Psyr_0493 0.75 -2.3 535,314 - Psyr_0493 0.75 -0.7 535,430 + +0.6 535,430 + +0.3 535,430 + +0.6 535,431 - -0.2 535,435 - +0.6 535,486 + +0.7 535,486 + -0.6 535,486 + -0.3 535,487 - -1.5 535,490 + +0.9 535,540 - -2.1 535,720 + Psyr_0494 0.11 +4.3 535,720 + Psyr_0494 0.11 -0.1 535,720 + Psyr_0494 0.11 +0.6 535,720 + Psyr_0494 0.11 -0.0 535,720 + Psyr_0494 0.11 +0.9 535,720 + Psyr_0494 0.11 -0.5 535,721 - Psyr_0494 0.11 +2.3 535,721 - Psyr_0494 0.11 -1.5 535,735 + Psyr_0494 0.12 -1.3 535,736 - Psyr_0494 0.12 -0.7 535,736 - Psyr_0494 0.12 +0.5 535,802 + Psyr_0494 0.17 -0.5 535,921 + Psyr_0494 0.25 +0.1 535,921 + Psyr_0494 0.25 +1.1 535,921 + Psyr_0494 0.25 +0.4 535,921 + Psyr_0494 0.25 -0.0 535,922 - Psyr_0494 0.25 -0.5 536,026 + Psyr_0494 0.32 +0.0 536,027 - Psyr_0494 0.32 -0.1 536,038 + Psyr_0494 0.33 +0.4 536,241 - Psyr_0494 0.47 +0.3 536,293 + Psyr_0494 0.50 +0.4 536,294 - Psyr_0494 0.51 -0.5 536,356 + Psyr_0494 0.55 +0.3
Or see this region's nucleotide sequence