Experiment: Cisplatin 0.003 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_3399 and Psest_3400 are separated by 58 nucleotides Psest_3400 and Psest_3401 are separated by 116 nucleotides Psest_3401 and Psest_3402 are separated by 3 nucleotides Psest_3402 and Psest_3403 are separated by 57 nucleotides
Psest_3399: Psest_3399 - Uncharacterized protein conserved in bacteria, at 3,567,927 to 3,568,196
_3399
Psest_3400: Psest_3400 - Copper resistance protein D., at 3,568,255 to 3,568,689
_3400
Psest_3401: Psest_3401 - DNA repair protein RadA, at 3,568,806 to 3,570,167
_3401
Psest_3402: Psest_3402 - PilZ domain., at 3,570,171 to 3,570,539
_3402
Psest_3403: Psest_3403 - Putative protein-S-isoprenylcysteine methyltransferase, at 3,570,597 to 3,571,058
_3403
Position (kb)
3568
3569
3570
3571 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 3567.889 kb on + strand at 3567.889 kb on + strand at 3567.894 kb on + strand at 3567.894 kb on + strand at 3567.894 kb on + strand at 3567.895 kb on - strand at 3568.032 kb on + strand, within Psest_3399 at 3568.033 kb on - strand, within Psest_3399 at 3568.330 kb on - strand, within Psest_3400 at 3568.554 kb on - strand, within Psest_3400 at 3568.715 kb on + strand at 3568.770 kb on - strand at 3568.786 kb on + strand at 3568.827 kb on + strand at 3568.827 kb on + strand at 3568.827 kb on + strand at 3568.827 kb on + strand at 3568.827 kb on + strand at 3568.827 kb on + strand at 3568.827 kb on + strand at 3568.827 kb on + strand at 3568.827 kb on + strand at 3568.827 kb on + strand at 3568.827 kb on + strand at 3568.827 kb on + strand at 3568.827 kb on + strand at 3568.827 kb on + strand at 3568.827 kb on + strand at 3568.828 kb on - strand at 3568.828 kb on - strand at 3568.828 kb on - strand at 3568.828 kb on - strand at 3568.828 kb on - strand at 3568.828 kb on - strand at 3568.828 kb on - strand at 3568.828 kb on - strand at 3569.008 kb on + strand, within Psest_3401 at 3569.009 kb on - strand, within Psest_3401 at 3569.166 kb on + strand, within Psest_3401 at 3569.166 kb on + strand, within Psest_3401 at 3569.167 kb on - strand, within Psest_3401 at 3569.167 kb on - strand, within Psest_3401 at 3569.167 kb on - strand, within Psest_3401 at 3569.167 kb on - strand, within Psest_3401 at 3569.167 kb on - strand, within Psest_3401 at 3569.511 kb on + strand, within Psest_3401 at 3569.511 kb on + strand, within Psest_3401 at 3569.511 kb on + strand, within Psest_3401 at 3569.511 kb on + strand, within Psest_3401 at 3569.512 kb on - strand, within Psest_3401 at 3569.847 kb on + strand, within Psest_3401 at 3569.847 kb on + strand, within Psest_3401 at 3569.848 kb on - strand, within Psest_3401 at 3569.848 kb on - strand, within Psest_3401 at 3569.848 kb on - strand, within Psest_3401 at 3570.273 kb on - strand, within Psest_3402 at 3570.531 kb on - strand at 3570.569 kb on + strand at 3570.570 kb on - strand at 3570.570 kb on - strand at 3570.571 kb on + strand at 3570.571 kb on + strand at 3570.571 kb on + strand at 3570.571 kb on + strand at 3570.571 kb on + strand at 3570.571 kb on + strand at 3570.572 kb on - strand at 3570.701 kb on - strand, within Psest_3403 at 3570.701 kb on - strand, within Psest_3403 at 3570.701 kb on - strand, within Psest_3403 at 3570.701 kb on - strand, within Psest_3403 at 3570.701 kb on - strand, within Psest_3403 at 3570.763 kb on + strand, within Psest_3403 at 3570.763 kb on + strand, within Psest_3403 at 3570.763 kb on + strand, within Psest_3403 at 3570.763 kb on + strand, within Psest_3403 at 3570.763 kb on + strand, within Psest_3403 at 3570.763 kb on + strand, within Psest_3403 at 3570.764 kb on - strand, within Psest_3403 at 3570.767 kb on + strand, within Psest_3403 at 3570.768 kb on - strand, within Psest_3403 at 3570.768 kb on - strand, within Psest_3403 at 3570.768 kb on - strand, within Psest_3403 at 3570.768 kb on - strand, within Psest_3403 at 3570.784 kb on + strand, within Psest_3403 at 3570.784 kb on + strand, within Psest_3403 at 3570.784 kb on + strand, within Psest_3403 at 3570.784 kb on + strand, within Psest_3403 at 3570.785 kb on - strand, within Psest_3403 at 3570.788 kb on + strand, within Psest_3403 at 3570.788 kb on + strand, within Psest_3403 at 3570.789 kb on - strand, within Psest_3403 at 3570.789 kb on - strand, within Psest_3403 at 3570.789 kb on - strand, within Psest_3403 at 3570.789 kb on - strand, within Psest_3403 at 3570.794 kb on + strand, within Psest_3403 at 3570.794 kb on + strand, within Psest_3403 at 3570.794 kb on + strand, within Psest_3403 at 3570.795 kb on - strand, within Psest_3403 at 3570.795 kb on - strand, within Psest_3403 at 3570.795 kb on - strand, within Psest_3403 at 3570.795 kb on - strand, within Psest_3403 at 3570.934 kb on + strand, within Psest_3403 at 3570.934 kb on + strand, within Psest_3403 at 3570.935 kb on - strand, within Psest_3403 at 3570.935 kb on - strand, within Psest_3403 at 3570.935 kb on - strand, within Psest_3403 at 3570.935 kb on - strand, within Psest_3403 at 3571.012 kb on + strand at 3571.012 kb on + strand at 3571.012 kb on + strand at 3571.012 kb on + strand at 3571.012 kb on + strand at 3571.013 kb on - strand at 3571.013 kb on - strand at 3571.013 kb on - strand at 3571.013 kb on - strand at 3571.013 kb on - strand at 3571.058 kb on + strand at 3571.058 kb on + strand at 3571.059 kb on - strand at 3571.059 kb on - strand at 3571.059 kb on - strand at 3571.059 kb on - strand at 3571.155 kb on + strand at 3571.156 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.003 mg/ml remove 3,567,889 + -0.8 3,567,889 + +0.7 3,567,894 + -0.6 3,567,894 + -0.6 3,567,894 + -0.4 3,567,895 - -1.8 3,568,032 + Psest_3399 0.39 +0.2 3,568,033 - Psest_3399 0.39 -0.8 3,568,330 - Psest_3400 0.17 +0.7 3,568,554 - Psest_3400 0.69 -0.2 3,568,715 + -0.3 3,568,770 - +1.3 3,568,786 + +0.8 3,568,827 + -1.8 3,568,827 + -0.9 3,568,827 + -2.3 3,568,827 + -2.1 3,568,827 + -0.1 3,568,827 + -1.3 3,568,827 + -0.5 3,568,827 + -3.2 3,568,827 + -1.2 3,568,827 + -0.7 3,568,827 + -0.6 3,568,827 + -3.4 3,568,827 + -2.2 3,568,827 + -1.8 3,568,827 + -2.2 3,568,828 - -1.4 3,568,828 - -1.3 3,568,828 - -1.7 3,568,828 - -1.0 3,568,828 - -2.3 3,568,828 - -0.5 3,568,828 - -2.5 3,568,828 - -0.1 3,569,008 + Psest_3401 0.15 -3.3 3,569,009 - Psest_3401 0.15 -1.3 3,569,166 + Psest_3401 0.26 -1.3 3,569,166 + Psest_3401 0.26 -2.1 3,569,167 - Psest_3401 0.27 -2.8 3,569,167 - Psest_3401 0.27 -2.3 3,569,167 - Psest_3401 0.27 -3.1 3,569,167 - Psest_3401 0.27 -1.7 3,569,167 - Psest_3401 0.27 -2.0 3,569,511 + Psest_3401 0.52 -1.8 3,569,511 + Psest_3401 0.52 -1.4 3,569,511 + Psest_3401 0.52 -1.1 3,569,511 + Psest_3401 0.52 -2.4 3,569,512 - Psest_3401 0.52 -2.6 3,569,847 + Psest_3401 0.76 -0.8 3,569,847 + Psest_3401 0.76 -2.5 3,569,848 - Psest_3401 0.77 -1.0 3,569,848 - Psest_3401 0.77 +1.9 3,569,848 - Psest_3401 0.77 -2.3 3,570,273 - Psest_3402 0.28 -1.3 3,570,531 - -0.6 3,570,569 + +0.2 3,570,570 - -0.5 3,570,570 - -0.8 3,570,571 + -2.1 3,570,571 + -0.7 3,570,571 + -2.1 3,570,571 + +0.7 3,570,571 + -0.1 3,570,571 + +0.2 3,570,572 - -0.1 3,570,701 - Psest_3403 0.23 -2.0 3,570,701 - Psest_3403 0.23 -1.2 3,570,701 - Psest_3403 0.23 +1.0 3,570,701 - Psest_3403 0.23 +0.5 3,570,701 - Psest_3403 0.23 +3.5 3,570,763 + Psest_3403 0.36 +0.4 3,570,763 + Psest_3403 0.36 -0.6 3,570,763 + Psest_3403 0.36 -0.2 3,570,763 + Psest_3403 0.36 +0.8 3,570,763 + Psest_3403 0.36 +1.1 3,570,763 + Psest_3403 0.36 -0.7 3,570,764 - Psest_3403 0.36 +1.5 3,570,767 + Psest_3403 0.37 +0.3 3,570,768 - Psest_3403 0.37 +0.5 3,570,768 - Psest_3403 0.37 +3.9 3,570,768 - Psest_3403 0.37 -0.1 3,570,768 - Psest_3403 0.37 +0.6 3,570,784 + Psest_3403 0.40 -0.1 3,570,784 + Psest_3403 0.40 -0.9 3,570,784 + Psest_3403 0.40 +1.1 3,570,784 + Psest_3403 0.40 -0.8 3,570,785 - Psest_3403 0.41 -1.0 3,570,788 + Psest_3403 0.41 -0.0 3,570,788 + Psest_3403 0.41 -1.0 3,570,789 - Psest_3403 0.42 -1.1 3,570,789 - Psest_3403 0.42 +1.0 3,570,789 - Psest_3403 0.42 -2.1 3,570,789 - Psest_3403 0.42 +1.6 3,570,794 + Psest_3403 0.43 -1.8 3,570,794 + Psest_3403 0.43 +1.1 3,570,794 + Psest_3403 0.43 +0.1 3,570,795 - Psest_3403 0.43 -1.0 3,570,795 - Psest_3403 0.43 +0.1 3,570,795 - Psest_3403 0.43 +1.1 3,570,795 - Psest_3403 0.43 -2.0 3,570,934 + Psest_3403 0.73 +0.1 3,570,934 + Psest_3403 0.73 +1.1 3,570,935 - Psest_3403 0.73 -0.4 3,570,935 - Psest_3403 0.73 +0.6 3,570,935 - Psest_3403 0.73 +0.8 3,570,935 - Psest_3403 0.73 +1.6 3,571,012 + +0.5 3,571,012 + +1.3 3,571,012 + -1.4 3,571,012 + -0.7 3,571,012 + -0.4 3,571,013 - -0.5 3,571,013 - +1.3 3,571,013 - +1.5 3,571,013 - +0.1 3,571,013 - +0.8 3,571,058 + -1.2 3,571,058 + -0.3 3,571,059 - +0.5 3,571,059 - -0.2 3,571,059 - +0.3 3,571,059 - +2.4 3,571,155 + +0.3 3,571,156 - -0.0
Or see this region's nucleotide sequence