Experiment: Cisplatin 0.003 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_3088 and Psest_3089 are separated by 127 nucleotides Psest_3089 and Psest_3090 overlap by 8 nucleotides Psest_3090 and Psest_3091 are separated by 48 nucleotides Psest_3091 and Psest_3092 overlap by 8 nucleotides
Psest_3088: Psest_3088 - Protein of unknown function (DUF2905)., at 3,268,258 to 3,268,464
_3088
Psest_3089: Psest_3089 - pyridoxine 5'-phosphate synthase, at 3,268,592 to 3,269,338
_3089
Psest_3090: Psest_3090 - DNA repair protein RecO, at 3,269,331 to 3,270,020
_3090
Psest_3091: Psest_3091 - GTP-binding protein Era, at 3,270,069 to 3,270,980
_3091
Psest_3092: Psest_3092 - ribonuclease III, bacterial, at 3,270,973 to 3,271,662
_3092
Position (kb)
3269
3270
3271 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1 at 3268.475 kb on - strand at 3268.564 kb on - strand at 3269.589 kb on - strand, within Psest_3090 at 3269.592 kb on + strand, within Psest_3090 at 3269.592 kb on + strand, within Psest_3090 at 3269.592 kb on + strand, within Psest_3090 at 3269.592 kb on + strand, within Psest_3090 at 3269.592 kb on + strand, within Psest_3090 at 3269.593 kb on - strand, within Psest_3090 at 3269.593 kb on - strand, within Psest_3090 at 3269.593 kb on - strand, within Psest_3090 at 3269.593 kb on - strand, within Psest_3090 at 3269.593 kb on - strand, within Psest_3090 at 3269.593 kb on - strand, within Psest_3090 at 3269.593 kb on - strand, within Psest_3090 at 3269.593 kb on - strand, within Psest_3090 at 3269.593 kb on - strand, within Psest_3090 at 3269.593 kb on - strand, within Psest_3090 at 3269.593 kb on - strand, within Psest_3090 at 3269.701 kb on + strand, within Psest_3090 at 3269.701 kb on + strand, within Psest_3090 at 3269.702 kb on - strand, within Psest_3090 at 3269.767 kb on + strand, within Psest_3090 at 3269.767 kb on + strand, within Psest_3090 at 3269.767 kb on + strand, within Psest_3090 at 3269.767 kb on + strand, within Psest_3090 at 3269.767 kb on + strand, within Psest_3090 at 3269.768 kb on - strand, within Psest_3090 at 3269.768 kb on - strand, within Psest_3090 at 3269.768 kb on - strand, within Psest_3090 at 3269.983 kb on + strand at 3269.984 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.003 mg/ml remove 3,268,475 - -0.7 3,268,564 - -1.7 3,269,589 - Psest_3090 0.37 -2.4 3,269,592 + Psest_3090 0.38 -3.7 3,269,592 + Psest_3090 0.38 -2.4 3,269,592 + Psest_3090 0.38 -3.3 3,269,592 + Psest_3090 0.38 -3.1 3,269,592 + Psest_3090 0.38 -2.7 3,269,593 - Psest_3090 0.38 -3.7 3,269,593 - Psest_3090 0.38 -3.3 3,269,593 - Psest_3090 0.38 -4.6 3,269,593 - Psest_3090 0.38 -1.9 3,269,593 - Psest_3090 0.38 -3.3 3,269,593 - Psest_3090 0.38 -2.3 3,269,593 - Psest_3090 0.38 -2.7 3,269,593 - Psest_3090 0.38 -3.8 3,269,593 - Psest_3090 0.38 -0.6 3,269,593 - Psest_3090 0.38 -3.6 3,269,593 - Psest_3090 0.38 -2.6 3,269,701 + Psest_3090 0.54 -3.6 3,269,701 + Psest_3090 0.54 -1.6 3,269,702 - Psest_3090 0.54 -3.6 3,269,767 + Psest_3090 0.63 -5.1 3,269,767 + Psest_3090 0.63 -4.2 3,269,767 + Psest_3090 0.63 -2.7 3,269,767 + Psest_3090 0.63 -2.7 3,269,767 + Psest_3090 0.63 -1.7 3,269,768 - Psest_3090 0.63 -3.2 3,269,768 - Psest_3090 0.63 -2.7 3,269,768 - Psest_3090 0.63 -1.7 3,269,983 + -0.9 3,269,984 - -4.9
Or see this region's nucleotide sequence