Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1544

Experiment: Cisplatin 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.003 mg/ml
1,641,654	+		Psest_1542	0.76	+0.5
1,641,817	+				+0.8
1,641,818	-				+0.3
1,641,818	-				-0.1
1,641,818	-				-0.4
1,641,820	+				+0.1
1,641,820	+				+1.5
1,641,820	+				-2.9
1,641,821	-				-1.2
1,641,881	+				+0.6
1,641,881	+				+0.2
1,641,892	+				+0.4
1,641,897	+				-3.9
1,641,898	-				-1.7
1,641,904	-				-0.1
1,641,904	-				+0.3
1,641,930	+				+0.7
1,641,930	+				-0.8
1,641,931	-				-1.7
1,641,953	+				-0.7
1,641,954	-				+0.6
1,642,290	+		Psest_1543	0.53	+1.1
1,642,290	+		Psest_1543	0.53	-2.1
1,642,290	+		Psest_1543	0.53	-0.8
1,642,291	-		Psest_1543	0.53	+0.1
1,642,291	-		Psest_1543	0.53	-1.0
1,642,291	-		Psest_1543	0.53	-1.2
1,642,356	+		Psest_1543	0.65	+1.2
1,642,357	-		Psest_1543	0.66	-2.3
1,642,503	+				-0.5
1,642,504	-				-0.9
1,642,504	-				+2.9
1,642,570	+				-2.1
1,642,704	-				-2.3
1,642,704	-				-2.5
1,642,705	+				+0.1
1,642,705	+				-2.3
1,642,705	+				-1.5
1,642,705	+				-0.8
1,642,705	+				-2.1
1,642,705	+				-1.8
1,642,705	+				-1.4
1,642,706	-				-3.4
1,642,706	-				-1.4
1,642,706	-				-2.0
1,642,706	-				-1.1
1,642,706	-				-3.0
1,642,821	+		Psest_1544	0.15	-1.2
1,642,821	+		Psest_1544	0.15	-2.2
1,642,822	-		Psest_1544	0.15	+0.3
1,642,827	+		Psest_1544	0.15	-2.3
1,642,827	+		Psest_1544	0.15	-2.4
1,642,827	+		Psest_1544	0.15	-2.7
1,642,827	+		Psest_1544	0.15	-1.2
1,642,827	+		Psest_1544	0.15	-1.5
1,642,828	-		Psest_1544	0.15	-1.7
1,642,828	-		Psest_1544	0.15	-0.5
1,642,828	-		Psest_1544	0.15	-1.3
1,642,828	-		Psest_1544	0.15	-0.8
1,642,889	+		Psest_1544	0.19	-2.8
1,643,141	+		Psest_1544	0.34	-2.4
1,643,141	+		Psest_1544	0.34	-2.1
1,643,141	+		Psest_1544	0.34	-2.3
1,643,141	+		Psest_1544	0.34	-2.1
1,643,141	+		Psest_1544	0.34	-0.8
1,643,141	+		Psest_1544	0.34	+0.5
1,643,141	+		Psest_1544	0.34	-4.1
1,643,141	+		Psest_1544	0.34	-0.8
1,643,142	-		Psest_1544	0.34	-0.2
1,643,142	-		Psest_1544	0.34	-3.4
1,643,142	-		Psest_1544	0.34	-2.7
1,643,142	-		Psest_1544	0.34	-1.6
1,643,142	-		Psest_1544	0.34	-1.5
1,643,142	-		Psest_1544	0.34	-0.4
1,643,142	-		Psest_1544	0.34	+0.3
1,643,142	-		Psest_1544	0.34	-1.2
1,644,054	+		Psest_1544	0.87	-0.8
1,644,207	-				-2.2
1,644,303	-				-0.4
1,644,369	-				+0.2
1,644,540	+				+0.3
1,644,718	+		Psest_1545	0.15	-0.1
1,644,745	+		Psest_1545	0.16	+0.9
1,644,769	+		Psest_1545	0.17	+0.6
1,644,769	+		Psest_1545	0.17	+0.0
1,644,769	+		Psest_1545	0.17	+0.8
1,644,769	+		Psest_1545	0.17	-0.4
1,644,770	-		Psest_1545	0.17	-0.5
1,644,770	-		Psest_1545	0.17	-0.2
1,644,770	-		Psest_1545	0.17	+0.3
1,644,770	-		Psest_1545	0.17	+2.5
1,644,856	+		Psest_1545	0.21	+0.1
1,644,857	-		Psest_1545	0.21	+0.9
1,644,872	+		Psest_1545	0.22	-0.8
1,644,873	-		Psest_1545	0.22	-1.8
1,644,873	-		Psest_1545	0.22	+0.3