Experiment: Cisplatin 0.003 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_0618 and Psest_0619 are separated by 476 nucleotides Psest_0619 and Psest_0620 are separated by 214 nucleotides Psest_0620 and Psest_0621 are separated by 4 nucleotides
Psest_0618: Psest_0618 - hypothetical protein, at 670,581 to 670,811
_0618
Psest_0619: Psest_0619 - cation diffusion facilitator family transporter, at 671,288 to 672,208
_0619
Psest_0620: Psest_0620 - Putative protein-S-isoprenylcysteine methyltransferase, at 672,423 to 672,884
_0620
Psest_0621: Psest_0621 - Protein-disulfide isomerase, at 672,889 to 673,569
_0621
Position (kb) 671
672
673 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 670.390 kb on + strand at 670.421 kb on + strand at 670.421 kb on + strand at 670.435 kb on + strand at 670.436 kb on - strand at 670.436 kb on - strand at 670.437 kb on + strand at 670.437 kb on + strand at 670.437 kb on + strand at 670.794 kb on - strand at 670.811 kb on + strand at 670.937 kb on + strand at 671.080 kb on - strand at 671.226 kb on - strand at 671.308 kb on + strand at 671.419 kb on - strand, within Psest_0619 at 671.431 kb on - strand, within Psest_0619 at 671.435 kb on - strand, within Psest_0619 at 671.435 kb on - strand, within Psest_0619 at 671.480 kb on - strand, within Psest_0619 at 671.585 kb on + strand, within Psest_0619 at 671.594 kb on + strand, within Psest_0619 at 671.594 kb on + strand, within Psest_0619 at 671.602 kb on + strand, within Psest_0619 at 671.604 kb on + strand, within Psest_0619 at 671.604 kb on + strand, within Psest_0619 at 671.604 kb on + strand, within Psest_0619 at 671.604 kb on + strand, within Psest_0619 at 671.677 kb on - strand, within Psest_0619 at 671.677 kb on - strand, within Psest_0619 at 671.677 kb on - strand, within Psest_0619 at 671.714 kb on - strand, within Psest_0619 at 671.720 kb on - strand, within Psest_0619 at 671.728 kb on + strand, within Psest_0619 at 671.728 kb on + strand, within Psest_0619 at 671.786 kb on - strand, within Psest_0619 at 671.831 kb on - strand, within Psest_0619 at 671.831 kb on - strand, within Psest_0619 at 671.886 kb on + strand, within Psest_0619 at 671.945 kb on - strand, within Psest_0619 at 671.947 kb on - strand, within Psest_0619 at 671.994 kb on + strand, within Psest_0619 at 671.994 kb on + strand, within Psest_0619 at 671.994 kb on + strand, within Psest_0619 at 671.994 kb on + strand, within Psest_0619 at 671.994 kb on + strand, within Psest_0619 at 671.994 kb on + strand, within Psest_0619 at 671.994 kb on + strand, within Psest_0619 at 671.994 kb on + strand, within Psest_0619 at 671.995 kb on - strand, within Psest_0619 at 671.995 kb on - strand, within Psest_0619 at 671.995 kb on - strand, within Psest_0619 at 672.094 kb on - strand, within Psest_0619 at 672.094 kb on - strand, within Psest_0619 at 672.103 kb on - strand, within Psest_0619 at 672.150 kb on + strand at 672.151 kb on - strand at 672.206 kb on + strand at 672.206 kb on + strand at 672.206 kb on + strand at 672.206 kb on + strand at 672.206 kb on + strand at 672.206 kb on + strand at 672.206 kb on + strand at 672.207 kb on - strand at 672.207 kb on - strand at 672.207 kb on - strand at 672.207 kb on - strand at 672.207 kb on - strand at 672.236 kb on - strand at 672.236 kb on - strand at 672.243 kb on + strand at 672.243 kb on + strand at 672.243 kb on + strand at 672.243 kb on + strand at 672.243 kb on + strand at 672.244 kb on - strand at 672.244 kb on - strand at 672.355 kb on + strand at 672.356 kb on - strand at 672.356 kb on - strand at 672.523 kb on + strand, within Psest_0620 at 672.523 kb on + strand, within Psest_0620 at 672.523 kb on + strand, within Psest_0620 at 672.523 kb on + strand, within Psest_0620 at 672.523 kb on + strand, within Psest_0620 at 672.523 kb on + strand, within Psest_0620 at 672.523 kb on + strand, within Psest_0620 at 672.523 kb on + strand, within Psest_0620 at 672.523 kb on + strand, within Psest_0620 at 672.523 kb on + strand, within Psest_0620 at 672.523 kb on + strand, within Psest_0620 at 672.523 kb on + strand, within Psest_0620 at 672.523 kb on + strand, within Psest_0620 at 672.524 kb on - strand, within Psest_0620 at 672.524 kb on - strand, within Psest_0620 at 672.524 kb on - strand, within Psest_0620 at 672.524 kb on - strand, within Psest_0620 at 672.524 kb on - strand, within Psest_0620 at 672.524 kb on - strand, within Psest_0620 at 672.524 kb on - strand, within Psest_0620 at 672.524 kb on - strand, within Psest_0620 at 672.540 kb on + strand, within Psest_0620 at 672.541 kb on - strand, within Psest_0620 at 672.541 kb on - strand, within Psest_0620 at 672.541 kb on - strand, within Psest_0620 at 672.606 kb on + strand, within Psest_0620 at 672.606 kb on + strand, within Psest_0620 at 672.606 kb on + strand, within Psest_0620 at 672.607 kb on - strand, within Psest_0620 at 672.610 kb on + strand, within Psest_0620 at 672.610 kb on + strand, within Psest_0620 at 672.610 kb on + strand, within Psest_0620 at 672.610 kb on + strand, within Psest_0620 at 672.610 kb on + strand, within Psest_0620 at 672.610 kb on + strand, within Psest_0620 at 672.610 kb on + strand, within Psest_0620 at 672.611 kb on - strand, within Psest_0620 at 672.611 kb on - strand, within Psest_0620 at 672.611 kb on - strand, within Psest_0620 at 672.611 kb on - strand, within Psest_0620 at 672.611 kb on - strand, within Psest_0620 at 672.611 kb on - strand, within Psest_0620 at 672.611 kb on - strand, within Psest_0620 at 672.611 kb on - strand, within Psest_0620 at 672.611 kb on - strand, within Psest_0620 at 672.611 kb on - strand, within Psest_0620 at 672.611 kb on - strand, within Psest_0620 at 672.611 kb on - strand, within Psest_0620 at 672.611 kb on - strand, within Psest_0620 at 672.611 kb on - strand, within Psest_0620 at 672.611 kb on - strand, within Psest_0620 at 672.611 kb on - strand, within Psest_0620 at 672.611 kb on - strand, within Psest_0620 at 672.611 kb on - strand, within Psest_0620 at 672.611 kb on - strand, within Psest_0620 at 672.611 kb on - strand, within Psest_0620 at 672.611 kb on - strand, within Psest_0620 at 672.611 kb on - strand, within Psest_0620 at 672.611 kb on - strand, within Psest_0620 at 672.634 kb on + strand, within Psest_0620 at 672.634 kb on + strand, within Psest_0620 at 672.634 kb on + strand, within Psest_0620 at 672.635 kb on - strand, within Psest_0620 at 672.635 kb on - strand, within Psest_0620 at 672.651 kb on + strand, within Psest_0620 at 672.652 kb on - strand, within Psest_0620 at 672.689 kb on + strand, within Psest_0620 at 672.689 kb on + strand, within Psest_0620 at 672.689 kb on + strand, within Psest_0620 at 672.689 kb on + strand, within Psest_0620 at 672.689 kb on + strand, within Psest_0620 at 672.690 kb on - strand, within Psest_0620 at 672.690 kb on - strand, within Psest_0620 at 672.692 kb on + strand, within Psest_0620 at 672.693 kb on - strand, within Psest_0620 at 672.693 kb on - strand, within Psest_0620 at 672.750 kb on + strand, within Psest_0620 at 672.750 kb on + strand, within Psest_0620 at 672.884 kb on + strand at 672.885 kb on - strand at 672.885 kb on - strand at 672.885 kb on - strand at 672.885 kb on - strand at 673.009 kb on - strand, within Psest_0621 at 673.009 kb on - strand, within Psest_0621 at 673.053 kb on + strand, within Psest_0621 at 673.053 kb on + strand, within Psest_0621 at 673.053 kb on + strand, within Psest_0621 at 673.053 kb on + strand, within Psest_0621 at 673.053 kb on + strand, within Psest_0621 at 673.053 kb on + strand, within Psest_0621 at 673.054 kb on - strand, within Psest_0621 at 673.054 kb on - strand, within Psest_0621 at 673.121 kb on - strand, within Psest_0621
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.003 mg/ml remove 670,390 + +1.4 670,421 + +0.8 670,421 + +1.6 670,435 + -1.1 670,436 - -2.1 670,436 - +0.9 670,437 + -1.4 670,437 + -0.3 670,437 + -0.5 670,794 - +0.4 670,811 + +0.9 670,937 + +0.9 671,080 - +0.3 671,226 - +1.8 671,308 + -1.2 671,419 - Psest_0619 0.14 +1.5 671,431 - Psest_0619 0.16 +0.5 671,435 - Psest_0619 0.16 +1.1 671,435 - Psest_0619 0.16 +0.3 671,480 - Psest_0619 0.21 -0.5 671,585 + Psest_0619 0.32 -0.3 671,594 + Psest_0619 0.33 +0.6 671,594 + Psest_0619 0.33 +0.0 671,602 + Psest_0619 0.34 +0.4 671,604 + Psest_0619 0.34 -0.5 671,604 + Psest_0619 0.34 +0.9 671,604 + Psest_0619 0.34 +0.0 671,604 + Psest_0619 0.34 -0.2 671,677 - Psest_0619 0.42 -0.6 671,677 - Psest_0619 0.42 +0.5 671,677 - Psest_0619 0.42 -0.6 671,714 - Psest_0619 0.46 -1.4 671,720 - Psest_0619 0.47 -1.4 671,728 + Psest_0619 0.48 +0.7 671,728 + Psest_0619 0.48 -2.7 671,786 - Psest_0619 0.54 +1.6 671,831 - Psest_0619 0.59 +1.0 671,831 - Psest_0619 0.59 +0.0 671,886 + Psest_0619 0.65 +2.1 671,945 - Psest_0619 0.71 +0.2 671,947 - Psest_0619 0.72 -0.5 671,994 + Psest_0619 0.77 +1.4 671,994 + Psest_0619 0.77 +1.6 671,994 + Psest_0619 0.77 +0.6 671,994 + Psest_0619 0.77 +2.2 671,994 + Psest_0619 0.77 -0.7 671,994 + Psest_0619 0.77 +2.0 671,994 + Psest_0619 0.77 +2.0 671,994 + Psest_0619 0.77 +0.8 671,995 - Psest_0619 0.77 -0.7 671,995 - Psest_0619 0.77 -1.2 671,995 - Psest_0619 0.77 +0.4 672,094 - Psest_0619 0.88 +1.3 672,094 - Psest_0619 0.88 +1.0 672,103 - Psest_0619 0.88 +2.7 672,150 + +0.3 672,151 - +0.4 672,206 + -2.5 672,206 + +3.2 672,206 + +0.1 672,206 + -0.7 672,206 + -1.1 672,206 + +1.6 672,206 + -1.1 672,207 - +0.4 672,207 - +2.9 672,207 - +0.7 672,207 - -0.6 672,207 - -0.2 672,236 - +1.4 672,236 - -0.2 672,243 + +0.9 672,243 + +0.7 672,243 + -1.2 672,243 + +0.0 672,243 + +0.6 672,244 - +0.2 672,244 - +0.8 672,355 + -0.7 672,356 - -0.5 672,356 - +2.1 672,523 + Psest_0620 0.22 +0.2 672,523 + Psest_0620 0.22 -0.2 672,523 + Psest_0620 0.22 +1.4 672,523 + Psest_0620 0.22 -2.5 672,523 + Psest_0620 0.22 +0.5 672,523 + Psest_0620 0.22 -0.4 672,523 + Psest_0620 0.22 +0.6 672,523 + Psest_0620 0.22 -0.6 672,523 + Psest_0620 0.22 -2.6 672,523 + Psest_0620 0.22 +3.4 672,523 + Psest_0620 0.22 -1.0 672,523 + Psest_0620 0.22 +0.4 672,523 + Psest_0620 0.22 +0.2 672,524 - Psest_0620 0.22 +1.3 672,524 - Psest_0620 0.22 +1.3 672,524 - Psest_0620 0.22 -0.1 672,524 - Psest_0620 0.22 -0.6 672,524 - Psest_0620 0.22 +1.6 672,524 - Psest_0620 0.22 +0.4 672,524 - Psest_0620 0.22 +0.9 672,524 - Psest_0620 0.22 -0.0 672,540 + Psest_0620 0.25 -2.2 672,541 - Psest_0620 0.26 +0.6 672,541 - Psest_0620 0.26 +0.6 672,541 - Psest_0620 0.26 -0.5 672,606 + Psest_0620 0.40 -0.6 672,606 + Psest_0620 0.40 +1.2 672,606 + Psest_0620 0.40 +0.4 672,607 - Psest_0620 0.40 -0.4 672,610 + Psest_0620 0.40 -2.6 672,610 + Psest_0620 0.40 -1.8 672,610 + Psest_0620 0.40 +0.5 672,610 + Psest_0620 0.40 +1.4 672,610 + Psest_0620 0.40 -1.0 672,610 + Psest_0620 0.40 -1.2 672,610 + Psest_0620 0.40 -1.2 672,611 - Psest_0620 0.41 +0.5 672,611 - Psest_0620 0.41 -1.7 672,611 - Psest_0620 0.41 +1.6 672,611 - Psest_0620 0.41 +0.8 672,611 - Psest_0620 0.41 +0.0 672,611 - Psest_0620 0.41 +0.4 672,611 - Psest_0620 0.41 -0.5 672,611 - Psest_0620 0.41 -0.0 672,611 - Psest_0620 0.41 +1.2 672,611 - Psest_0620 0.41 +1.7 672,611 - Psest_0620 0.41 +0.6 672,611 - Psest_0620 0.41 -3.0 672,611 - Psest_0620 0.41 -1.0 672,611 - Psest_0620 0.41 +1.0 672,611 - Psest_0620 0.41 -0.7 672,611 - Psest_0620 0.41 +1.6 672,611 - Psest_0620 0.41 -0.7 672,611 - Psest_0620 0.41 +1.1 672,611 - Psest_0620 0.41 +0.5 672,611 - Psest_0620 0.41 +1.6 672,611 - Psest_0620 0.41 +0.6 672,611 - Psest_0620 0.41 +0.0 672,611 - Psest_0620 0.41 -1.0 672,634 + Psest_0620 0.46 +1.0 672,634 + Psest_0620 0.46 -0.2 672,634 + Psest_0620 0.46 +0.8 672,635 - Psest_0620 0.46 +0.2 672,635 - Psest_0620 0.46 +1.0 672,651 + Psest_0620 0.49 -0.7 672,652 - Psest_0620 0.50 +0.5 672,689 + Psest_0620 0.58 -0.2 672,689 + Psest_0620 0.58 +0.0 672,689 + Psest_0620 0.58 -1.4 672,689 + Psest_0620 0.58 -0.0 672,689 + Psest_0620 0.58 +0.3 672,690 - Psest_0620 0.58 -0.5 672,690 - Psest_0620 0.58 -0.8 672,692 + Psest_0620 0.58 +0.3 672,693 - Psest_0620 0.58 +0.9 672,693 - Psest_0620 0.58 -0.9 672,750 + Psest_0620 0.71 +2.2 672,750 + Psest_0620 0.71 +2.8 672,884 + -0.7 672,885 - +1.3 672,885 - -0.2 672,885 - +0.7 672,885 - +0.7 673,009 - Psest_0621 0.18 +1.4 673,009 - Psest_0621 0.18 -1.7 673,053 + Psest_0621 0.24 -1.0 673,053 + Psest_0621 0.24 -1.1 673,053 + Psest_0621 0.24 +2.5 673,053 + Psest_0621 0.24 +2.1 673,053 + Psest_0621 0.24 -0.3 673,053 + Psest_0621 0.24 -2.0 673,054 - Psest_0621 0.24 +0.1 673,054 - Psest_0621 0.24 +0.6 673,121 - Psest_0621 0.34 +1.0
Or see this region's nucleotide sequence