Experiment: Cisplatin 0.003 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2263 and Psest_2264 overlap by 4 nucleotides Psest_2264 and Psest_2265 overlap by 4 nucleotides
Psest_2263: Psest_2263 - heavy metal efflux pump (cobalt-zinc-cadmium), at 2,409,104 to 2,412,226
_2263
Psest_2264: Psest_2264 - RND family efflux transporter, MFP subunit, at 2,412,223 to 2,413,710
_2264
Psest_2265: Psest_2265 - Outer membrane protein, at 2,413,707 to 2,414,960
_2265
Position (kb)
2412
2413
2414 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2411.254 kb on - strand, within Psest_2263 at 2411.254 kb on - strand, within Psest_2263 at 2411.541 kb on + strand, within Psest_2263 at 2411.541 kb on + strand, within Psest_2263 at 2411.541 kb on + strand, within Psest_2263 at 2411.541 kb on + strand, within Psest_2263 at 2411.541 kb on + strand, within Psest_2263 at 2411.541 kb on + strand, within Psest_2263 at 2411.541 kb on + strand, within Psest_2263 at 2411.541 kb on + strand, within Psest_2263 at 2411.541 kb on + strand, within Psest_2263 at 2411.541 kb on + strand, within Psest_2263 at 2411.542 kb on - strand, within Psest_2263 at 2411.542 kb on - strand, within Psest_2263 at 2411.542 kb on - strand, within Psest_2263 at 2411.542 kb on - strand, within Psest_2263 at 2411.542 kb on - strand, within Psest_2263 at 2411.542 kb on - strand, within Psest_2263 at 2411.542 kb on - strand, within Psest_2263 at 2411.542 kb on - strand, within Psest_2263 at 2411.668 kb on - strand, within Psest_2263 at 2411.730 kb on + strand, within Psest_2263 at 2411.731 kb on - strand, within Psest_2263 at 2411.731 kb on - strand, within Psest_2263 at 2411.731 kb on - strand, within Psest_2263 at 2411.890 kb on - strand, within Psest_2263 at 2411.890 kb on - strand, within Psest_2263 at 2411.917 kb on - strand at 2411.942 kb on + strand at 2411.943 kb on - strand at 2411.943 kb on - strand at 2411.946 kb on + strand at 2411.946 kb on + strand at 2411.946 kb on + strand at 2411.946 kb on + strand at 2411.946 kb on + strand at 2411.947 kb on - strand at 2411.947 kb on - strand at 2411.947 kb on - strand at 2411.947 kb on - strand at 2411.947 kb on - strand at 2412.378 kb on + strand, within Psest_2264 at 2412.379 kb on - strand, within Psest_2264 at 2412.379 kb on - strand, within Psest_2264 at 2412.379 kb on - strand, within Psest_2264 at 2412.460 kb on + strand, within Psest_2264 at 2412.461 kb on - strand, within Psest_2264 at 2412.566 kb on - strand, within Psest_2264 at 2412.566 kb on - strand, within Psest_2264 at 2412.823 kb on - strand, within Psest_2264 at 2412.906 kb on + strand, within Psest_2264 at 2412.906 kb on + strand, within Psest_2264 at 2412.906 kb on + strand, within Psest_2264 at 2413.202 kb on + strand, within Psest_2264 at 2413.203 kb on - strand, within Psest_2264 at 2413.289 kb on + strand, within Psest_2264 at 2413.290 kb on - strand, within Psest_2264 at 2413.290 kb on - strand, within Psest_2264 at 2413.290 kb on - strand, within Psest_2264 at 2413.350 kb on - strand, within Psest_2264 at 2413.350 kb on - strand, within Psest_2264 at 2413.350 kb on - strand, within Psest_2264 at 2413.350 kb on - strand, within Psest_2264 at 2413.357 kb on + strand, within Psest_2264 at 2413.565 kb on + strand at 2413.566 kb on - strand at 2413.698 kb on + strand at 2413.698 kb on + strand at 2413.698 kb on + strand at 2413.698 kb on + strand at 2413.699 kb on - strand at 2414.105 kb on - strand, within Psest_2265 at 2414.126 kb on - strand, within Psest_2265 at 2414.209 kb on + strand, within Psest_2265 at 2414.441 kb on + strand, within Psest_2265 at 2414.614 kb on - strand, within Psest_2265 at 2414.614 kb on - strand, within Psest_2265
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.003 mg/ml remove 2,411,254 - Psest_2263 0.69 -1.7 2,411,254 - Psest_2263 0.69 +1.4 2,411,541 + Psest_2263 0.78 -1.6 2,411,541 + Psest_2263 0.78 +1.2 2,411,541 + Psest_2263 0.78 +2.4 2,411,541 + Psest_2263 0.78 +0.3 2,411,541 + Psest_2263 0.78 +0.2 2,411,541 + Psest_2263 0.78 +0.5 2,411,541 + Psest_2263 0.78 -1.3 2,411,541 + Psest_2263 0.78 +0.5 2,411,541 + Psest_2263 0.78 -1.6 2,411,541 + Psest_2263 0.78 +0.3 2,411,542 - Psest_2263 0.78 +0.3 2,411,542 - Psest_2263 0.78 +0.5 2,411,542 - Psest_2263 0.78 -0.6 2,411,542 - Psest_2263 0.78 +0.4 2,411,542 - Psest_2263 0.78 -0.1 2,411,542 - Psest_2263 0.78 +1.5 2,411,542 - Psest_2263 0.78 +0.5 2,411,542 - Psest_2263 0.78 +0.2 2,411,668 - Psest_2263 0.82 -0.5 2,411,730 + Psest_2263 0.84 +1.7 2,411,731 - Psest_2263 0.84 +0.4 2,411,731 - Psest_2263 0.84 +3.6 2,411,731 - Psest_2263 0.84 -2.4 2,411,890 - Psest_2263 0.89 -1.3 2,411,890 - Psest_2263 0.89 -0.4 2,411,917 - +2.8 2,411,942 + -0.6 2,411,943 - -0.3 2,411,943 - -0.2 2,411,946 + -0.4 2,411,946 + -0.5 2,411,946 + -0.4 2,411,946 + -0.1 2,411,946 + -1.4 2,411,947 - -0.3 2,411,947 - -0.2 2,411,947 - -0.5 2,411,947 - +1.4 2,411,947 - -1.3 2,412,378 + Psest_2264 0.10 +0.8 2,412,379 - Psest_2264 0.10 -2.3 2,412,379 - Psest_2264 0.10 -2.7 2,412,379 - Psest_2264 0.10 -0.7 2,412,460 + Psest_2264 0.16 +0.7 2,412,461 - Psest_2264 0.16 +1.1 2,412,566 - Psest_2264 0.23 +0.4 2,412,566 - Psest_2264 0.23 -1.9 2,412,823 - Psest_2264 0.40 +0.9 2,412,906 + Psest_2264 0.46 -2.0 2,412,906 + Psest_2264 0.46 -0.8 2,412,906 + Psest_2264 0.46 -1.3 2,413,202 + Psest_2264 0.66 +0.7 2,413,203 - Psest_2264 0.66 -0.4 2,413,289 + Psest_2264 0.72 -1.2 2,413,290 - Psest_2264 0.72 -1.2 2,413,290 - Psest_2264 0.72 -2.4 2,413,290 - Psest_2264 0.72 -0.6 2,413,350 - Psest_2264 0.76 +0.3 2,413,350 - Psest_2264 0.76 +0.2 2,413,350 - Psest_2264 0.76 -1.4 2,413,350 - Psest_2264 0.76 -1.0 2,413,357 + Psest_2264 0.76 +0.1 2,413,565 + +0.1 2,413,566 - +1.8 2,413,698 + +0.0 2,413,698 + +0.7 2,413,698 + +0.3 2,413,698 + +0.3 2,413,699 - +1.4 2,414,105 - Psest_2265 0.32 -0.2 2,414,126 - Psest_2265 0.33 -1.1 2,414,209 + Psest_2265 0.40 +0.4 2,414,441 + Psest_2265 0.59 -0.7 2,414,614 - Psest_2265 0.72 -2.4 2,414,614 - Psest_2265 0.72 -2.3
Or see this region's nucleotide sequence