Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_0964
Experiment: Cisplatin 0.0016 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Cisplatin 0.0016 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,043,454 | + | +0.2 | |||
1,043,455 | - | +0.5 | |||
1,043,497 | + | -0.5 | |||
1,043,518 | - | -0.8 | |||
1,043,520 | - | +1.1 | |||
1,043,541 | - | +0.1 | |||
1,043,541 | - | -2.7 | |||
1,043,633 | + | -2.8 | |||
1,043,633 | + | -2.4 | |||
1,043,633 | + | +1.5 | |||
1,043,633 | + | -1.4 | |||
1,043,633 | + | +0.6 | |||
1,043,669 | + | -0.5 | |||
1,043,671 | + | -0.4 | |||
1,046,161 | + | +0.7 | |||
1,046,161 | + | +0.2 | |||
1,046,161 | + | +1.9 | |||
1,046,161 | + | -1.0 | |||
1,046,266 | + | +3.4 | |||
1,046,266 | + | +0.5 | |||
1,046,266 | + | +0.1 | |||
1,046,266 | + | +0.4 | |||
1,046,266 | + | -0.4 | |||
1,046,266 | + | +0.6 | |||
1,046,266 | + | -0.0 | |||
1,046,266 | + | +0.1 | |||
1,046,386 | + | -0.3 |
Or see this region's nucleotide sequence