Experiment: Cisplatin 0.0016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_3294 and Psest_3295 are separated by 185 nucleotides Psest_3295 and Psest_3296 are separated by 160 nucleotides
Psest_3294: Psest_3294 - sulfate adenylyltransferase, small subunit, at 3,460,961 to 3,461,878
_3294
Psest_3295: Psest_3295 - dinuclear metal center protein, YbgI/SA1388 family, at 3,462,064 to 3,462,822
_3295
Psest_3296: Psest_3296 - Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain, at 3,462,983 to 3,464,140
_3296
Position (kb)
3462
3463 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 3461.936 kb on - strand at 3461.936 kb on - strand at 3461.946 kb on + strand at 3461.947 kb on - strand at 3461.947 kb on - strand at 3461.954 kb on - strand at 3461.976 kb on - strand at 3461.990 kb on + strand at 3462.023 kb on + strand at 3462.023 kb on + strand at 3462.023 kb on + strand at 3462.023 kb on + strand at 3462.024 kb on - strand at 3462.024 kb on - strand at 3462.024 kb on - strand at 3462.039 kb on + strand at 3462.075 kb on + strand at 3462.122 kb on + strand at 3462.122 kb on + strand at 3462.224 kb on - strand, within Psest_3295 at 3462.276 kb on - strand, within Psest_3295 at 3462.305 kb on - strand, within Psest_3295 at 3462.353 kb on - strand, within Psest_3295 at 3462.495 kb on + strand, within Psest_3295 at 3462.637 kb on + strand, within Psest_3295 at 3462.637 kb on + strand, within Psest_3295 at 3462.713 kb on - strand, within Psest_3295 at 3462.752 kb on + strand at 3462.752 kb on + strand at 3462.752 kb on + strand at 3462.808 kb on - strand at 3462.828 kb on + strand at 3462.829 kb on - strand at 3462.921 kb on + strand at 3462.922 kb on - strand at 3462.922 kb on - strand at 3462.922 kb on - strand at 3462.922 kb on - strand at 3462.922 kb on - strand at 3462.922 kb on - strand at 3462.922 kb on - strand at 3462.923 kb on + strand at 3462.923 kb on + strand at 3462.923 kb on + strand at 3462.924 kb on - strand at 3462.924 kb on - strand at 3462.937 kb on + strand at 3462.996 kb on + strand at 3462.996 kb on + strand at 3462.996 kb on + strand at 3463.035 kb on + strand at 3463.193 kb on + strand, within Psest_3296 at 3463.193 kb on + strand, within Psest_3296 at 3463.194 kb on - strand, within Psest_3296 at 3463.194 kb on - strand, within Psest_3296 at 3463.194 kb on - strand, within Psest_3296 at 3463.195 kb on + strand, within Psest_3296 at 3463.340 kb on + strand, within Psest_3296 at 3463.363 kb on - strand, within Psest_3296 at 3463.516 kb on - strand, within Psest_3296 at 3463.625 kb on + strand, within Psest_3296 at 3463.625 kb on + strand, within Psest_3296 at 3463.625 kb on + strand, within Psest_3296 at 3463.625 kb on + strand, within Psest_3296 at 3463.625 kb on + strand, within Psest_3296 at 3463.626 kb on - strand, within Psest_3296 at 3463.626 kb on - strand, within Psest_3296 at 3463.626 kb on - strand, within Psest_3296 at 3463.626 kb on - strand, within Psest_3296 at 3463.626 kb on - strand, within Psest_3296 at 3463.626 kb on - strand, within Psest_3296 at 3463.626 kb on - strand, within Psest_3296 at 3463.626 kb on - strand, within Psest_3296
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.0016 mg/ml remove 3,461,936 - -0.3 3,461,936 - +0.5 3,461,946 + +1.5 3,461,947 - -0.5 3,461,947 - -0.6 3,461,954 - +0.1 3,461,976 - -0.8 3,461,990 + -1.7 3,462,023 + +0.3 3,462,023 + +0.1 3,462,023 + +0.0 3,462,023 + +0.2 3,462,024 - +1.6 3,462,024 - -0.9 3,462,024 - +0.1 3,462,039 + -1.2 3,462,075 + +0.6 3,462,122 + -0.2 3,462,122 + -0.1 3,462,224 - Psest_3295 0.21 -1.5 3,462,276 - Psest_3295 0.28 -1.9 3,462,305 - Psest_3295 0.32 -1.0 3,462,353 - Psest_3295 0.38 -1.1 3,462,495 + Psest_3295 0.57 -1.5 3,462,637 + Psest_3295 0.75 +0.3 3,462,637 + Psest_3295 0.75 -0.5 3,462,713 - Psest_3295 0.86 -0.1 3,462,752 + +0.4 3,462,752 + -0.1 3,462,752 + +0.2 3,462,808 - -0.3 3,462,828 + +0.2 3,462,829 - -0.9 3,462,921 + +1.5 3,462,922 - +0.7 3,462,922 - -1.2 3,462,922 - +0.2 3,462,922 - +1.1 3,462,922 - -0.2 3,462,922 - +0.9 3,462,922 - -1.1 3,462,923 + +2.0 3,462,923 + -0.9 3,462,923 + -0.7 3,462,924 - +1.5 3,462,924 - +1.5 3,462,937 + -1.6 3,462,996 + +1.5 3,462,996 + -0.5 3,462,996 + +1.5 3,463,035 + -0.1 3,463,193 + Psest_3296 0.18 +1.5 3,463,193 + Psest_3296 0.18 +1.5 3,463,194 - Psest_3296 0.18 +1.5 3,463,194 - Psest_3296 0.18 +1.5 3,463,194 - Psest_3296 0.18 +1.5 3,463,195 + Psest_3296 0.18 +0.5 3,463,340 + Psest_3296 0.31 +1.5 3,463,363 - Psest_3296 0.33 +1.5 3,463,516 - Psest_3296 0.46 +0.5 3,463,625 + Psest_3296 0.55 -0.1 3,463,625 + Psest_3296 0.55 +3.5 3,463,625 + Psest_3296 0.55 +0.5 3,463,625 + Psest_3296 0.55 +0.5 3,463,625 + Psest_3296 0.55 +1.5 3,463,626 - Psest_3296 0.56 -0.1 3,463,626 - Psest_3296 0.56 +1.5 3,463,626 - Psest_3296 0.56 +1.5 3,463,626 - Psest_3296 0.56 +1.5 3,463,626 - Psest_3296 0.56 +0.5 3,463,626 - Psest_3296 0.56 +1.5 3,463,626 - Psest_3296 0.56 +0.5 3,463,626 - Psest_3296 0.56 +1.5
Or see this region's nucleotide sequence