Experiment: Cisplatin 0.0016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_0415 and Psest_0416 are separated by 85 nucleotides Psest_0416 and Psest_0417 are separated by 360 nucleotides Psest_0417 and Psest_0418 are separated by 149 nucleotides
Psest_0415: Psest_0415 - dethiobiotin synthase, at 450,447 to 451,133
_0415
Psest_0416: Psest_0416 - hypothetical protein, at 451,219 to 451,467
_0416
Psest_0417: Psest_0417 - Acyl-CoA dehydrogenases, at 451,828 to 453,633
_0417
Psest_0418: Psest_0418 - diguanylate cyclase (GGDEF) domain, at 453,783 to 455,072
_0418
Position (kb) 451
452
453
454 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 450.837 kb on + strand, within Psest_0415 at 450.837 kb on + strand, within Psest_0415 at 450.837 kb on + strand, within Psest_0415 at 450.838 kb on - strand, within Psest_0415 at 450.922 kb on + strand, within Psest_0415 at 450.922 kb on + strand, within Psest_0415 at 450.923 kb on - strand, within Psest_0415 at 450.923 kb on - strand, within Psest_0415 at 450.923 kb on - strand, within Psest_0415 at 450.923 kb on - strand, within Psest_0415 at 451.233 kb on + strand at 451.261 kb on + strand, within Psest_0416 at 451.261 kb on + strand, within Psest_0416 at 451.261 kb on + strand, within Psest_0416 at 451.262 kb on - strand, within Psest_0416 at 451.262 kb on - strand, within Psest_0416 at 451.262 kb on - strand, within Psest_0416 at 451.262 kb on - strand, within Psest_0416 at 451.262 kb on - strand, within Psest_0416 at 451.262 kb on - strand, within Psest_0416 at 451.262 kb on - strand, within Psest_0416 at 451.633 kb on - strand at 451.633 kb on - strand at 451.633 kb on - strand at 451.633 kb on - strand at 451.671 kb on + strand at 451.671 kb on + strand at 451.672 kb on - strand at 451.672 kb on - strand at 451.713 kb on + strand at 451.713 kb on + strand at 451.713 kb on + strand at 451.809 kb on + strand at 451.822 kb on + strand at 451.837 kb on + strand at 451.837 kb on + strand at 451.838 kb on - strand at 451.868 kb on + strand at 451.868 kb on + strand at 451.869 kb on - strand at 451.889 kb on - strand at 451.901 kb on - strand at 452.275 kb on + strand, within Psest_0417 at 452.275 kb on + strand, within Psest_0417 at 452.392 kb on + strand, within Psest_0417 at 452.393 kb on - strand, within Psest_0417 at 452.393 kb on - strand, within Psest_0417 at 452.920 kb on + strand, within Psest_0417 at 453.071 kb on + strand, within Psest_0417 at 453.073 kb on + strand, within Psest_0417 at 453.073 kb on + strand, within Psest_0417 at 453.074 kb on - strand, within Psest_0417 at 453.145 kb on + strand, within Psest_0417 at 453.145 kb on + strand, within Psest_0417 at 453.394 kb on + strand, within Psest_0417 at 453.403 kb on + strand, within Psest_0417 at 453.526 kb on + strand at 453.648 kb on - strand at 453.766 kb on - strand at 453.897 kb on + strand at 453.897 kb on + strand at 453.897 kb on + strand at 453.897 kb on + strand at 453.897 kb on + strand at 453.898 kb on - strand at 453.898 kb on - strand at 453.898 kb on - strand at 453.898 kb on - strand at 453.917 kb on - strand, within Psest_0418 at 453.952 kb on - strand, within Psest_0418 at 453.952 kb on - strand, within Psest_0418 at 453.952 kb on - strand, within Psest_0418 at 453.952 kb on - strand, within Psest_0418 at 453.991 kb on - strand, within Psest_0418 at 453.999 kb on + strand, within Psest_0418 at 453.999 kb on + strand, within Psest_0418 at 453.999 kb on + strand, within Psest_0418 at 453.999 kb on + strand, within Psest_0418 at 454.026 kb on + strand, within Psest_0418 at 454.026 kb on + strand, within Psest_0418 at 454.026 kb on + strand, within Psest_0418 at 454.026 kb on + strand, within Psest_0418 at 454.026 kb on + strand, within Psest_0418 at 454.027 kb on - strand, within Psest_0418 at 454.030 kb on - strand, within Psest_0418 at 454.341 kb on + strand, within Psest_0418 at 454.342 kb on - strand, within Psest_0418 at 454.497 kb on + strand, within Psest_0418 at 454.497 kb on + strand, within Psest_0418 at 454.497 kb on + strand, within Psest_0418 at 454.497 kb on + strand, within Psest_0418 at 454.498 kb on - strand, within Psest_0418 at 454.582 kb on - strand, within Psest_0418 at 454.632 kb on + strand, within Psest_0418 at 454.632 kb on + strand, within Psest_0418 at 454.632 kb on + strand, within Psest_0418 at 454.632 kb on + strand, within Psest_0418 at 454.632 kb on + strand, within Psest_0418 at 454.632 kb on + strand, within Psest_0418 at 454.632 kb on + strand, within Psest_0418 at 454.632 kb on + strand, within Psest_0418 at 454.632 kb on + strand, within Psest_0418 at 454.632 kb on + strand, within Psest_0418 at 454.633 kb on - strand, within Psest_0418 at 454.633 kb on - strand, within Psest_0418 at 454.633 kb on - strand, within Psest_0418 at 454.633 kb on - strand, within Psest_0418 at 454.633 kb on - strand, within Psest_0418 at 454.633 kb on - strand, within Psest_0418 at 454.633 kb on - strand, within Psest_0418 at 454.633 kb on - strand, within Psest_0418 at 454.633 kb on - strand, within Psest_0418 at 454.633 kb on - strand, within Psest_0418
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.0016 mg/ml remove 450,837 + Psest_0415 0.57 -0.4 450,837 + Psest_0415 0.57 -1.1 450,837 + Psest_0415 0.57 +1.5 450,838 - Psest_0415 0.57 -1.6 450,922 + Psest_0415 0.69 -0.7 450,922 + Psest_0415 0.69 -0.9 450,923 - Psest_0415 0.69 -1.6 450,923 - Psest_0415 0.69 -0.8 450,923 - Psest_0415 0.69 -0.5 450,923 - Psest_0415 0.69 -0.1 451,233 + +0.9 451,261 + Psest_0416 0.17 +0.9 451,261 + Psest_0416 0.17 +1.1 451,261 + Psest_0416 0.17 +0.8 451,262 - Psest_0416 0.17 -1.1 451,262 - Psest_0416 0.17 -1.5 451,262 - Psest_0416 0.17 -0.2 451,262 - Psest_0416 0.17 -1.3 451,262 - Psest_0416 0.17 +0.9 451,262 - Psest_0416 0.17 -1.1 451,262 - Psest_0416 0.17 +0.9 451,633 - -0.4 451,633 - -0.9 451,633 - -0.6 451,633 - -0.1 451,671 + -0.7 451,671 + -2.0 451,672 - -0.2 451,672 - -0.6 451,713 + +0.6 451,713 + +0.4 451,713 + -0.0 451,809 + +0.7 451,822 + +1.5 451,837 + -1.5 451,837 + -0.3 451,838 - -0.1 451,868 + +0.5 451,868 + -0.1 451,869 - +1.5 451,889 - -0.8 451,901 - +1.2 452,275 + Psest_0417 0.25 +2.1 452,275 + Psest_0417 0.25 -0.5 452,392 + Psest_0417 0.31 +0.5 452,393 - Psest_0417 0.31 +0.5 452,393 - Psest_0417 0.31 +1.1 452,920 + Psest_0417 0.60 -0.1 453,071 + Psest_0417 0.69 +3.1 453,073 + Psest_0417 0.69 +0.5 453,073 + Psest_0417 0.69 +1.5 453,074 - Psest_0417 0.69 -1.5 453,145 + Psest_0417 0.73 -0.1 453,145 + Psest_0417 0.73 +1.5 453,394 + Psest_0417 0.87 +2.5 453,403 + Psest_0417 0.87 +1.5 453,526 + -1.1 453,648 - -0.1 453,766 - -0.5 453,897 + -1.5 453,897 + +1.4 453,897 + -1.1 453,897 + +1.1 453,897 + +0.5 453,898 - -0.9 453,898 - -0.9 453,898 - -0.4 453,898 - +2.5 453,917 - Psest_0418 0.10 -1.9 453,952 - Psest_0418 0.13 +0.5 453,952 - Psest_0418 0.13 -0.2 453,952 - Psest_0418 0.13 -0.1 453,952 - Psest_0418 0.13 -1.0 453,991 - Psest_0418 0.16 +0.2 453,999 + Psest_0418 0.17 +1.9 453,999 + Psest_0418 0.17 -0.5 453,999 + Psest_0418 0.17 -0.7 453,999 + Psest_0418 0.17 -0.6 454,026 + Psest_0418 0.19 +0.3 454,026 + Psest_0418 0.19 -0.6 454,026 + Psest_0418 0.19 -2.1 454,026 + Psest_0418 0.19 +0.1 454,026 + Psest_0418 0.19 -1.2 454,027 - Psest_0418 0.19 +0.4 454,030 - Psest_0418 0.19 +2.7 454,341 + Psest_0418 0.43 -1.5 454,342 - Psest_0418 0.43 -1.9 454,497 + Psest_0418 0.55 +0.3 454,497 + Psest_0418 0.55 -0.4 454,497 + Psest_0418 0.55 +1.9 454,497 + Psest_0418 0.55 -2.2 454,498 - Psest_0418 0.55 -1.5 454,582 - Psest_0418 0.62 +3.3 454,632 + Psest_0418 0.66 +2.2 454,632 + Psest_0418 0.66 +0.2 454,632 + Psest_0418 0.66 -1.5 454,632 + Psest_0418 0.66 -0.2 454,632 + Psest_0418 0.66 -2.1 454,632 + Psest_0418 0.66 +0.2 454,632 + Psest_0418 0.66 -0.9 454,632 + Psest_0418 0.66 +0.3 454,632 + Psest_0418 0.66 +0.6 454,632 + Psest_0418 0.66 -1.4 454,633 - Psest_0418 0.66 -0.3 454,633 - Psest_0418 0.66 -0.5 454,633 - Psest_0418 0.66 -1.0 454,633 - Psest_0418 0.66 -3.3 454,633 - Psest_0418 0.66 -0.8 454,633 - Psest_0418 0.66 -0.2 454,633 - Psest_0418 0.66 +1.1 454,633 - Psest_0418 0.66 -1.5 454,633 - Psest_0418 0.66 +0.5 454,633 - Psest_0418 0.66 -1.1
Or see this region's nucleotide sequence