Experiment: Cisplatin 0.0016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2760 and Psest_2761 are separated by 83 nucleotides Psest_2761 and Psest_2762 are separated by 153 nucleotides Psest_2762 and Psest_2763 are separated by 374 nucleotides
Psest_2760: Psest_2760 - hypothetical protein, at 2,947,473 to 2,949,416
_2760
Psest_2761: Psest_2761 - Uncharacterized protein with SCP/PR1 domains, at 2,949,500 to 2,950,336
_2761
Psest_2762: Psest_2762 - hypothetical protein, at 2,950,490 to 2,950,891
_2762
Psest_2763: Psest_2763 - Cellobiose phosphorylase, at 2,951,266 to 2,959,797
_2763
Position (kb)
2949
2950
2951 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2948.617 kb on + strand, within Psest_2760 at 2948.617 kb on + strand, within Psest_2760 at 2948.617 kb on + strand, within Psest_2760 at 2948.618 kb on - strand, within Psest_2760 at 2948.618 kb on - strand, within Psest_2760 at 2948.618 kb on - strand, within Psest_2760 at 2948.761 kb on + strand, within Psest_2760 at 2948.761 kb on + strand, within Psest_2760 at 2948.761 kb on + strand, within Psest_2760 at 2948.761 kb on + strand, within Psest_2760 at 2948.761 kb on + strand, within Psest_2760 at 2948.762 kb on - strand, within Psest_2760 at 2948.762 kb on - strand, within Psest_2760 at 2948.762 kb on - strand, within Psest_2760 at 2948.762 kb on - strand, within Psest_2760 at 2948.762 kb on - strand, within Psest_2760 at 2948.893 kb on + strand, within Psest_2760 at 2948.894 kb on - strand, within Psest_2760 at 2948.894 kb on - strand, within Psest_2760 at 2948.894 kb on - strand, within Psest_2760 at 2949.071 kb on + strand, within Psest_2760 at 2949.072 kb on - strand, within Psest_2760 at 2949.145 kb on + strand, within Psest_2760 at 2949.204 kb on + strand, within Psest_2760 at 2949.205 kb on - strand, within Psest_2760 at 2949.205 kb on - strand, within Psest_2760 at 2949.205 kb on - strand, within Psest_2760 at 2949.288 kb on + strand at 2949.289 kb on - strand at 2949.528 kb on + strand at 2949.528 kb on + strand at 2949.528 kb on + strand at 2949.529 kb on - strand at 2949.561 kb on + strand at 2949.670 kb on + strand, within Psest_2761 at 2949.696 kb on + strand, within Psest_2761 at 2949.773 kb on - strand, within Psest_2761 at 2949.808 kb on + strand, within Psest_2761 at 2949.851 kb on - strand, within Psest_2761 at 2950.226 kb on + strand, within Psest_2761 at 2950.227 kb on - strand, within Psest_2761 at 2950.227 kb on - strand, within Psest_2761 at 2950.240 kb on - strand, within Psest_2761 at 2950.682 kb on + strand, within Psest_2762 at 2950.682 kb on + strand, within Psest_2762 at 2950.682 kb on + strand, within Psest_2762 at 2950.683 kb on - strand, within Psest_2762 at 2950.683 kb on - strand, within Psest_2762 at 2950.683 kb on - strand, within Psest_2762 at 2950.990 kb on + strand at 2950.991 kb on - strand at 2951.000 kb on + strand at 2951.000 kb on + strand at 2951.000 kb on + strand at 2951.000 kb on + strand at 2951.007 kb on + strand at 2951.139 kb on - strand at 2951.240 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.0016 mg/ml remove 2,948,617 + Psest_2760 0.59 +0.5 2,948,617 + Psest_2760 0.59 -0.2 2,948,617 + Psest_2760 0.59 +0.3 2,948,618 - Psest_2760 0.59 +0.2 2,948,618 - Psest_2760 0.59 +0.4 2,948,618 - Psest_2760 0.59 +0.3 2,948,761 + Psest_2760 0.66 -0.1 2,948,761 + Psest_2760 0.66 -1.2 2,948,761 + Psest_2760 0.66 +0.7 2,948,761 + Psest_2760 0.66 +1.2 2,948,761 + Psest_2760 0.66 -0.5 2,948,762 - Psest_2760 0.66 -0.9 2,948,762 - Psest_2760 0.66 -1.6 2,948,762 - Psest_2760 0.66 +0.3 2,948,762 - Psest_2760 0.66 -1.1 2,948,762 - Psest_2760 0.66 +0.2 2,948,893 + Psest_2760 0.73 -0.5 2,948,894 - Psest_2760 0.73 -2.6 2,948,894 - Psest_2760 0.73 -0.9 2,948,894 - Psest_2760 0.73 +2.2 2,949,071 + Psest_2760 0.82 -0.5 2,949,072 - Psest_2760 0.82 -1.6 2,949,145 + Psest_2760 0.86 +1.2 2,949,204 + Psest_2760 0.89 +0.4 2,949,205 - Psest_2760 0.89 +0.4 2,949,205 - Psest_2760 0.89 -0.4 2,949,205 - Psest_2760 0.89 -2.1 2,949,288 + -0.5 2,949,289 - +0.8 2,949,528 + +0.8 2,949,528 + +0.3 2,949,528 + -0.6 2,949,529 - -2.0 2,949,561 + -0.8 2,949,670 + Psest_2761 0.20 +0.2 2,949,696 + Psest_2761 0.23 +0.7 2,949,773 - Psest_2761 0.33 -2.2 2,949,808 + Psest_2761 0.37 -0.0 2,949,851 - Psest_2761 0.42 -0.2 2,950,226 + Psest_2761 0.87 -0.5 2,950,227 - Psest_2761 0.87 -2.1 2,950,227 - Psest_2761 0.87 -2.3 2,950,240 - Psest_2761 0.88 -1.3 2,950,682 + Psest_2762 0.48 -1.3 2,950,682 + Psest_2762 0.48 -0.3 2,950,682 + Psest_2762 0.48 -1.1 2,950,683 - Psest_2762 0.48 -0.3 2,950,683 - Psest_2762 0.48 +2.3 2,950,683 - Psest_2762 0.48 -1.6 2,950,990 + -0.2 2,950,991 - +1.0 2,951,000 + +0.1 2,951,000 + +1.7 2,951,000 + -0.6 2,951,000 + -1.1 2,951,007 + +0.6 2,951,139 - +1.2 2,951,240 + +1.8
Or see this region's nucleotide sequence