Experiment: Cisplatin 0.0016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2603 and Psest_2604 are separated by 25 nucleotides Psest_2604 and Psest_2605 are separated by 57 nucleotides Psest_2605 and Psest_2606 are separated by 62 nucleotides
Psest_2603: Psest_2603 - capsular exopolysaccharide family, at 2,784,723 to 2,786,936
_2603
Psest_2604: Psest_2604 - WbqC-like protein family., at 2,786,962 to 2,787,705
_2604
Psest_2605: Psest_2605 - transcriptional activator RfaH, at 2,787,763 to 2,788,272
_2605
Psest_2606: Psest_2606 - Glycosyltransferase, at 2,788,335 to 2,789,645
_2606
Position (kb)
2787
2788
2789 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 2786.910 kb on + strand at 2786.910 kb on + strand at 2786.910 kb on + strand at 2786.911 kb on - strand at 2786.911 kb on - strand at 2786.911 kb on - strand at 2786.911 kb on - strand at 2786.911 kb on - strand at 2786.911 kb on - strand at 2786.911 kb on - strand at 2786.911 kb on - strand at 2786.916 kb on + strand at 2786.917 kb on - strand at 2786.917 kb on - strand at 2786.917 kb on - strand at 2786.917 kb on - strand at 2786.917 kb on - strand at 2786.917 kb on - strand at 2786.917 kb on - strand at 2786.917 kb on - strand at 2786.917 kb on - strand at 2786.917 kb on - strand at 2786.917 kb on - strand at 2786.917 kb on - strand at 2786.917 kb on - strand at 2786.917 kb on - strand at 2786.992 kb on + strand at 2786.993 kb on - strand at 2786.996 kb on + strand at 2786.996 kb on + strand at 2786.996 kb on + strand at 2786.996 kb on + strand at 2786.996 kb on + strand at 2786.996 kb on + strand at 2786.997 kb on - strand at 2786.997 kb on - strand at 2786.997 kb on - strand at 2786.997 kb on - strand at 2786.997 kb on - strand at 2786.997 kb on - strand at 2786.997 kb on - strand at 2787.005 kb on - strand at 2787.005 kb on - strand at 2787.013 kb on + strand at 2787.067 kb on + strand, within Psest_2604 at 2787.067 kb on + strand, within Psest_2604 at 2787.068 kb on - strand, within Psest_2604 at 2787.068 kb on - strand, within Psest_2604 at 2787.068 kb on - strand, within Psest_2604 at 2787.068 kb on - strand, within Psest_2604 at 2787.068 kb on - strand, within Psest_2604 at 2787.068 kb on - strand, within Psest_2604 at 2787.239 kb on - strand, within Psest_2604 at 2787.239 kb on - strand, within Psest_2604 at 2787.352 kb on + strand, within Psest_2604 at 2787.438 kb on - strand, within Psest_2604 at 2787.464 kb on - strand, within Psest_2604 at 2787.464 kb on - strand, within Psest_2604 at 2787.464 kb on - strand, within Psest_2604 at 2787.464 kb on - strand, within Psest_2604 at 2787.494 kb on - strand, within Psest_2604 at 2787.559 kb on + strand, within Psest_2604 at 2787.559 kb on + strand, within Psest_2604 at 2787.560 kb on - strand, within Psest_2604 at 2787.560 kb on - strand, within Psest_2604 at 2787.560 kb on - strand, within Psest_2604 at 2787.771 kb on + strand at 2787.771 kb on + strand at 2787.772 kb on - strand at 2787.772 kb on - strand at 2787.772 kb on - strand at 2787.772 kb on - strand at 2787.772 kb on - strand at 2787.772 kb on - strand at 2787.791 kb on - strand at 2787.937 kb on + strand, within Psest_2605 at 2787.977 kb on - strand, within Psest_2605 at 2788.253 kb on - strand at 2788.345 kb on + strand at 2788.346 kb on - strand at 2788.363 kb on - strand at 2788.363 kb on - strand at 2788.539 kb on + strand, within Psest_2606 at 2788.540 kb on - strand, within Psest_2606 at 2788.540 kb on - strand, within Psest_2606 at 2788.540 kb on - strand, within Psest_2606 at 2788.621 kb on + strand, within Psest_2606 at 2788.621 kb on + strand, within Psest_2606 at 2788.621 kb on + strand, within Psest_2606 at 2788.622 kb on - strand, within Psest_2606 at 2788.622 kb on - strand, within Psest_2606 at 2788.622 kb on - strand, within Psest_2606 at 2788.622 kb on - strand, within Psest_2606 at 2788.622 kb on - strand, within Psest_2606 at 2788.622 kb on - strand, within Psest_2606 at 2788.632 kb on - strand, within Psest_2606 at 2788.721 kb on - strand, within Psest_2606 at 2788.735 kb on + strand, within Psest_2606 at 2788.735 kb on + strand, within Psest_2606 at 2788.749 kb on + strand, within Psest_2606 at 2788.915 kb on - strand, within Psest_2606 at 2788.915 kb on - strand, within Psest_2606 at 2788.915 kb on - strand, within Psest_2606 at 2789.019 kb on + strand, within Psest_2606 at 2789.020 kb on - strand, within Psest_2606 at 2789.127 kb on + strand, within Psest_2606 at 2789.127 kb on + strand, within Psest_2606 at 2789.128 kb on - strand, within Psest_2606 at 2789.128 kb on - strand, within Psest_2606
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.0016 mg/ml remove 2,786,910 + -0.9 2,786,910 + +0.1 2,786,910 + +0.4 2,786,911 - -0.2 2,786,911 - +0.2 2,786,911 - -0.6 2,786,911 - +0.0 2,786,911 - +2.8 2,786,911 - +0.4 2,786,911 - +0.4 2,786,911 - -1.2 2,786,916 + +0.1 2,786,917 - +0.6 2,786,917 - -1.2 2,786,917 - -0.1 2,786,917 - +2.1 2,786,917 - -0.9 2,786,917 - -0.6 2,786,917 - +0.0 2,786,917 - +0.7 2,786,917 - -0.0 2,786,917 - +1.0 2,786,917 - -0.1 2,786,917 - +1.1 2,786,917 - -0.1 2,786,917 - +0.2 2,786,992 + -0.6 2,786,993 - -0.6 2,786,996 + -1.8 2,786,996 + -1.5 2,786,996 + +2.6 2,786,996 + +0.6 2,786,996 + -0.1 2,786,996 + +0.5 2,786,997 - -0.9 2,786,997 - +0.6 2,786,997 - -1.0 2,786,997 - +0.3 2,786,997 - -0.4 2,786,997 - +0.7 2,786,997 - -1.2 2,787,005 - +0.4 2,787,005 - +0.1 2,787,013 + -1.6 2,787,067 + Psest_2604 0.14 +0.1 2,787,067 + Psest_2604 0.14 +0.4 2,787,068 - Psest_2604 0.14 +0.8 2,787,068 - Psest_2604 0.14 +1.1 2,787,068 - Psest_2604 0.14 -1.1 2,787,068 - Psest_2604 0.14 -1.3 2,787,068 - Psest_2604 0.14 +1.2 2,787,068 - Psest_2604 0.14 +0.6 2,787,239 - Psest_2604 0.37 -0.2 2,787,239 - Psest_2604 0.37 +0.9 2,787,352 + Psest_2604 0.52 +4.2 2,787,438 - Psest_2604 0.64 +0.7 2,787,464 - Psest_2604 0.67 +1.3 2,787,464 - Psest_2604 0.67 +0.9 2,787,464 - Psest_2604 0.67 -0.5 2,787,464 - Psest_2604 0.67 +0.1 2,787,494 - Psest_2604 0.72 +2.4 2,787,559 + Psest_2604 0.80 -2.0 2,787,559 + Psest_2604 0.80 -1.5 2,787,560 - Psest_2604 0.80 -1.0 2,787,560 - Psest_2604 0.80 +0.7 2,787,560 - Psest_2604 0.80 -1.5 2,787,771 + +0.7 2,787,771 + +1.0 2,787,772 - -1.0 2,787,772 - +1.1 2,787,772 - +1.6 2,787,772 - -0.8 2,787,772 - -0.4 2,787,772 - -0.1 2,787,791 - -0.1 2,787,937 + Psest_2605 0.34 -0.4 2,787,977 - Psest_2605 0.42 -1.4 2,788,253 - +1.8 2,788,345 + -0.7 2,788,346 - -1.2 2,788,363 - -0.3 2,788,363 - -1.3 2,788,539 + Psest_2606 0.16 +2.2 2,788,540 - Psest_2606 0.16 -0.3 2,788,540 - Psest_2606 0.16 +0.6 2,788,540 - Psest_2606 0.16 -1.0 2,788,621 + Psest_2606 0.22 -0.4 2,788,621 + Psest_2606 0.22 -0.5 2,788,621 + Psest_2606 0.22 +1.9 2,788,622 - Psest_2606 0.22 +2.1 2,788,622 - Psest_2606 0.22 -0.1 2,788,622 - Psest_2606 0.22 -0.8 2,788,622 - Psest_2606 0.22 +0.6 2,788,622 - Psest_2606 0.22 -1.3 2,788,622 - Psest_2606 0.22 -0.6 2,788,632 - Psest_2606 0.23 +0.7 2,788,721 - Psest_2606 0.29 -0.8 2,788,735 + Psest_2606 0.31 +0.0 2,788,735 + Psest_2606 0.31 +1.3 2,788,749 + Psest_2606 0.32 +1.1 2,788,915 - Psest_2606 0.44 -1.1 2,788,915 - Psest_2606 0.44 +1.7 2,788,915 - Psest_2606 0.44 -0.7 2,789,019 + Psest_2606 0.52 -1.0 2,789,020 - Psest_2606 0.52 -0.7 2,789,127 + Psest_2606 0.60 -0.9 2,789,127 + Psest_2606 0.60 +1.2 2,789,128 - Psest_2606 0.60 +0.6 2,789,128 - Psest_2606 0.60 -0.2
Or see this region's nucleotide sequence