Experiment: Cisplatin 0.0016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2163 and Psest_2164 are separated by 102 nucleotides Psest_2164 and Psest_2165 are separated by 27 nucleotides Psest_2165 and Psest_2166 are separated by 16 nucleotides
Psest_2163: Psest_2163 - Transcriptional regulator, at 2,315,713 to 2,316,633
_2163
Psest_2164: Psest_2164 - Uncharacterized conserved protein, at 2,316,736 to 2,317,560
_2164
Psest_2165: Psest_2165 - Cytochrome B561, at 2,317,588 to 2,318,427
_2165
Psest_2166: Psest_2166 - Membrane proteins related to metalloendopeptidases, at 2,318,444 to 2,319,292
_2166
Position (kb)
2316
2317
2318 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2315.765 kb on + strand at 2315.765 kb on + strand at 2315.915 kb on + strand, within Psest_2163 at 2315.916 kb on - strand, within Psest_2163 at 2315.916 kb on - strand, within Psest_2163 at 2315.916 kb on - strand, within Psest_2163 at 2316.211 kb on - strand, within Psest_2163 at 2316.249 kb on + strand, within Psest_2163 at 2316.249 kb on + strand, within Psest_2163 at 2316.268 kb on + strand, within Psest_2163 at 2316.437 kb on + strand, within Psest_2163 at 2316.437 kb on + strand, within Psest_2163 at 2316.438 kb on - strand, within Psest_2163 at 2316.711 kb on + strand at 2316.712 kb on - strand at 2316.973 kb on + strand, within Psest_2164 at 2316.973 kb on + strand, within Psest_2164 at 2316.973 kb on + strand, within Psest_2164 at 2316.974 kb on - strand, within Psest_2164 at 2316.974 kb on - strand, within Psest_2164 at 2316.974 kb on - strand, within Psest_2164 at 2316.974 kb on - strand, within Psest_2164 at 2316.974 kb on - strand, within Psest_2164 at 2316.999 kb on + strand, within Psest_2164 at 2316.999 kb on + strand, within Psest_2164 at 2317.003 kb on + strand, within Psest_2164 at 2317.003 kb on + strand, within Psest_2164 at 2317.003 kb on + strand, within Psest_2164 at 2317.003 kb on + strand, within Psest_2164 at 2317.003 kb on + strand, within Psest_2164 at 2317.003 kb on + strand, within Psest_2164 at 2317.003 kb on + strand, within Psest_2164 at 2317.003 kb on + strand, within Psest_2164 at 2317.003 kb on + strand, within Psest_2164 at 2317.004 kb on - strand, within Psest_2164 at 2317.004 kb on - strand, within Psest_2164 at 2317.004 kb on - strand, within Psest_2164 at 2317.591 kb on + strand at 2317.591 kb on + strand at 2317.889 kb on + strand, within Psest_2165 at 2318.185 kb on + strand, within Psest_2165 at 2318.185 kb on + strand, within Psest_2165 at 2318.185 kb on + strand, within Psest_2165 at 2318.185 kb on + strand, within Psest_2165 at 2318.185 kb on + strand, within Psest_2165 at 2318.186 kb on - strand, within Psest_2165 at 2318.225 kb on - strand, within Psest_2165 at 2318.273 kb on + strand, within Psest_2165
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.0016 mg/ml remove 2,315,765 + -1.5 2,315,765 + +1.6 2,315,915 + Psest_2163 0.22 -0.0 2,315,916 - Psest_2163 0.22 -0.3 2,315,916 - Psest_2163 0.22 -0.0 2,315,916 - Psest_2163 0.22 -0.4 2,316,211 - Psest_2163 0.54 +0.3 2,316,249 + Psest_2163 0.58 +1.7 2,316,249 + Psest_2163 0.58 +0.9 2,316,268 + Psest_2163 0.60 +0.7 2,316,437 + Psest_2163 0.79 +1.3 2,316,437 + Psest_2163 0.79 +1.1 2,316,438 - Psest_2163 0.79 +1.5 2,316,711 + +0.9 2,316,712 - -2.8 2,316,973 + Psest_2164 0.29 -0.3 2,316,973 + Psest_2164 0.29 -0.9 2,316,973 + Psest_2164 0.29 +0.0 2,316,974 - Psest_2164 0.29 -0.6 2,316,974 - Psest_2164 0.29 -1.5 2,316,974 - Psest_2164 0.29 -1.7 2,316,974 - Psest_2164 0.29 -0.9 2,316,974 - Psest_2164 0.29 -0.7 2,316,999 + Psest_2164 0.32 -1.3 2,316,999 + Psest_2164 0.32 -1.3 2,317,003 + Psest_2164 0.32 +0.0 2,317,003 + Psest_2164 0.32 -0.1 2,317,003 + Psest_2164 0.32 +0.8 2,317,003 + Psest_2164 0.32 -0.2 2,317,003 + Psest_2164 0.32 -2.1 2,317,003 + Psest_2164 0.32 +0.4 2,317,003 + Psest_2164 0.32 -0.5 2,317,003 + Psest_2164 0.32 +0.1 2,317,003 + Psest_2164 0.32 -1.4 2,317,004 - Psest_2164 0.32 -0.7 2,317,004 - Psest_2164 0.32 +0.3 2,317,004 - Psest_2164 0.32 -1.7 2,317,591 + +1.0 2,317,591 + +1.1 2,317,889 + Psest_2165 0.36 +1.4 2,318,185 + Psest_2165 0.71 -1.4 2,318,185 + Psest_2165 0.71 +0.6 2,318,185 + Psest_2165 0.71 +1.3 2,318,185 + Psest_2165 0.71 -1.6 2,318,185 + Psest_2165 0.71 -0.2 2,318,186 - Psest_2165 0.71 +0.4 2,318,225 - Psest_2165 0.76 -0.1 2,318,273 + Psest_2165 0.82 -1.9
Or see this region's nucleotide sequence