Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2054

Experiment: Cisplatin 0.0016 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.0016 mg/ml
2,177,229	+				+0.7
2,177,230	-				+0.3
2,177,230	-				-0.6
2,177,230	-				-0.2
2,177,279	-				+2.1
2,177,305	+				+1.9
2,177,305	+				-1.1
2,177,347	+				-0.4
2,177,348	-				+1.0
2,177,348	-				-2.0
2,177,421	+				-0.3
2,177,422	-		Psest_2053	0.10	-0.1
2,177,899	+		Psest_2053	0.84	+0.5
2,177,914	+		Psest_2053	0.86	-0.2
2,178,116	+				-0.3
2,178,309	+				+1.6
2,178,309	+				-1.1
2,178,309	+				+0.9
2,178,309	+				+0.4
2,178,309	+				-2.9
2,178,309	+				+1.2
2,178,309	+				-1.2
2,178,309	+				+0.7
2,178,309	+				-0.1
2,178,310	-				-0.9
2,178,414	+		Psest_2054	0.13	+1.6
2,178,414	+		Psest_2054	0.13	-0.6
2,178,414	+		Psest_2054	0.13	-1.7
2,178,414	+		Psest_2054	0.13	-0.0
2,178,414	+		Psest_2054	0.13	-0.2
2,178,461	+		Psest_2054	0.16	+0.1
2,178,555	+		Psest_2054	0.21	-0.5
2,178,555	+		Psest_2054	0.21	-0.4
2,178,556	-		Psest_2054	0.21	-0.7
2,178,556	-		Psest_2054	0.21	+0.5
2,178,556	-		Psest_2054	0.21	-0.0
2,178,607	-		Psest_2054	0.24	+0.6
2,178,627	+		Psest_2054	0.25	+0.1
2,178,627	+		Psest_2054	0.25	+1.4
2,178,628	-		Psest_2054	0.25	-0.7
2,178,657	+		Psest_2054	0.26	-0.8
2,178,657	+		Psest_2054	0.26	+0.7
2,178,658	-		Psest_2054	0.26	-1.5
2,178,681	+		Psest_2054	0.27	+1.3
2,178,791	+		Psest_2054	0.33	-1.0
2,178,891	+		Psest_2054	0.39	-0.0
2,178,891	+		Psest_2054	0.39	-0.7
2,178,891	+		Psest_2054	0.39	-2.0
2,178,891	+		Psest_2054	0.39	-0.3
2,178,891	+		Psest_2054	0.39	-1.9
2,178,954	+		Psest_2054	0.42	+2.3
2,179,071	+		Psest_2054	0.48	-0.0
2,179,072	-		Psest_2054	0.48	+0.2
2,179,482	+		Psest_2054	0.70	-1.6
2,179,575	+		Psest_2054	0.75	+0.3
2,179,575	+		Psest_2054	0.75	-1.0
2,179,576	-		Psest_2054	0.75	+0.5
2,179,576	-		Psest_2054	0.75	+0.1
2,179,590	+		Psest_2054	0.76	-0.1
2,179,590	+		Psest_2054	0.76	-0.5
2,179,590	+		Psest_2054	0.76	-1.5
2,179,590	+		Psest_2054	0.76	-0.6
2,179,591	-		Psest_2054	0.76	-0.2
2,179,591	-		Psest_2054	0.76	-1.1
2,179,656	+		Psest_2054	0.80	+1.9
2,179,656	+		Psest_2054	0.80	-0.5
2,179,723	-		Psest_2054	0.83	-1.0
2,179,983	+				+1.9
2,179,983	+				-1.2
2,179,984	-				+1.2
2,180,079	+				+0.6
2,180,180	+				-0.3
2,180,180	+				-0.4
2,180,189	+				+1.3
2,180,332	+				-1.0
2,180,332	+				-0.3
2,180,342	+				-1.2
2,180,343	-				+0.1
2,180,353	-				-0.3
2,180,398	-		Psest_2055	0.12	+0.5
2,180,398	-		Psest_2055	0.12	-0.4
2,180,551	+		Psest_2055	0.47	+0.7
2,180,551	+		Psest_2055	0.47	+0.3
2,180,635	+		Psest_2055	0.66	+0.3
2,180,635	+		Psest_2055	0.66	+0.7
2,180,653	+		Psest_2055	0.70	+2.5
2,180,654	-		Psest_2055	0.70	+0.6
2,180,654	-		Psest_2055	0.70	-0.7
2,180,654	-		Psest_2055	0.70	-0.7
2,180,654	-		Psest_2055	0.70	+0.8
2,180,654	-		Psest_2055	0.70	-1.5
2,180,698	+		Psest_2055	0.80	-0.0
2,180,698	+		Psest_2055	0.80	-1.0
2,180,699	-		Psest_2055	0.80	+0.2
2,180,699	-		Psest_2055	0.80	+0.8
2,180,699	-		Psest_2055	0.80	-1.2
2,180,755	+				+1.9
2,180,755	+				+1.1
2,180,755	+				-0.3
2,180,755	+				+0.3
2,180,755	+				+0.3
2,180,755	+				-0.2
2,180,755	+				-0.5
2,180,755	+				+0.7
2,180,756	-				+0.4
2,180,756	-				-0.0
2,180,756	-				-0.4
2,180,756	-				+1.8
2,180,756	-				-0.5
2,180,756	-				-0.5
2,180,756	-				+0.4
2,180,756	-				-0.5
2,180,910	+		Psest_2056	0.14	+1.6
2,180,929	-		Psest_2056	0.16	-0.1
2,180,930	+		Psest_2056	0.16	-1.5
2,180,930	+		Psest_2056	0.16	-0.7
2,180,930	+		Psest_2056	0.16	+1.5
2,180,931	-		Psest_2056	0.16	+1.6
2,180,931	-		Psest_2056	0.16	+0.0
2,180,931	-		Psest_2056	0.16	+0.4
2,180,931	-		Psest_2056	0.16	+1.7
2,180,931	-		Psest_2056	0.16	+0.8
2,180,931	-		Psest_2056	0.16	+1.2
2,180,934	+		Psest_2056	0.16	-1.0
2,180,934	+		Psest_2056	0.16	+0.3
2,180,934	+		Psest_2056	0.16	-0.4
2,180,934	+		Psest_2056	0.16	-0.7
2,180,935	-		Psest_2056	0.17	-0.2