Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3520

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,698,268	+		Psest_3518	0.76	+2.3
3,698,269	-		Psest_3518	0.77	+2.4
3,698,376	+				+2.3
3,698,377	-				-1.7
3,698,434	-				+0.4
3,698,477	-				+0.6
3,698,616	+				+0.6
3,698,616	+				-0.2
3,698,723	+		Psest_3519	0.26	-0.9
3,698,723	+		Psest_3519	0.26	-1.0
3,698,724	-		Psest_3519	0.26	-0.4
3,698,724	-		Psest_3519	0.26	-0.6
3,699,088	-				-1.4
3,699,117	+				-1.0
3,699,117	+				+0.9
3,699,118	-				-0.8
3,699,118	-				+2.5
3,699,118	-				-0.0
3,699,118	-				+1.2
3,699,173	+				-1.3
3,699,572	+		Psest_3520	0.32	-0.2
3,699,713	+		Psest_3520	0.43	-0.7
3,699,713	+		Psest_3520	0.43	-0.2
3,699,713	+		Psest_3520	0.43	-0.2
3,699,713	+		Psest_3520	0.43	+0.8
3,699,713	+		Psest_3520	0.43	-0.7
3,699,713	+		Psest_3520	0.43	-1.9
3,699,714	-		Psest_3520	0.43	-0.5
3,699,714	-		Psest_3520	0.43	+0.1
3,699,714	-		Psest_3520	0.43	-0.2
3,699,714	-		Psest_3520	0.43	-1.7
3,700,017	-		Psest_3520	0.65	-1.0
3,700,079	+		Psest_3520	0.70	+1.5
3,700,079	+		Psest_3520	0.70	-1.6
3,700,080	-		Psest_3520	0.70	-2.2
3,700,469	+				-2.2
3,700,469	+				+2.5
3,700,469	+				+0.4
3,700,469	+				+0.2
3,700,469	+				-0.2
3,700,470	-				+1.5
3,700,470	-				+1.1
3,700,485	-				-0.9
3,700,940	+		Psest_3521	0.13	-0.2
3,700,940	+		Psest_3521	0.13	-0.8
3,700,940	+		Psest_3521	0.13	+1.5
3,700,940	+		Psest_3521	0.13	+4.3
3,700,940	+		Psest_3521	0.13	-0.7
3,700,940	+		Psest_3521	0.13	-0.4
3,700,941	-		Psest_3521	0.13	+2.3
3,700,941	-		Psest_3521	0.13	+1.6
3,700,941	-		Psest_3521	0.13	+0.4
3,701,088	-		Psest_3521	0.24	+1.2
3,701,127	-		Psest_3521	0.27	+1.1
3,701,390	+		Psest_3521	0.45	-0.4
3,701,431	+		Psest_3521	0.48	+3.0