Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3500

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,671,402	+		Psest_3499	0.15	-0.3
3,671,402	+		Psest_3499	0.15	-0.4
3,671,402	+		Psest_3499	0.15	+1.8
3,671,402	+		Psest_3499	0.15	-0.1
3,671,540	+		Psest_3499	0.31	-0.1
3,671,552	+		Psest_3499	0.32	-0.1
3,671,552	+		Psest_3499	0.32	-0.7
3,671,552	+		Psest_3499	0.32	-0.3
3,671,552	+		Psest_3499	0.32	-0.0
3,671,552	+		Psest_3499	0.32	+0.5
3,671,553	-		Psest_3499	0.32	-0.1
3,671,553	-		Psest_3499	0.32	+0.6
3,671,553	-		Psest_3499	0.32	-3.3
3,671,553	-		Psest_3499	0.32	-0.1
3,671,916	-		Psest_3499	0.74	-1.6
3,671,955	-		Psest_3499	0.79	-0.8
3,672,131	-				-0.5
3,672,131	-				+0.2
3,672,131	-				+0.5
3,672,217	+				+0.4
3,672,218	-				-0.5
3,672,218	-				-1.2
3,672,420	+		Psest_3500	0.37	-0.4
3,672,420	+		Psest_3500	0.37	-1.2
3,672,420	+		Psest_3500	0.37	+1.6
3,672,420	+		Psest_3500	0.37	+2.1
3,672,421	-		Psest_3500	0.37	-2.0
3,672,421	-		Psest_3500	0.37	+1.0
3,672,421	-		Psest_3500	0.37	+0.8
3,672,421	-		Psest_3500	0.37	+1.7
3,672,661	+		Psest_3500	0.80	+1.1
3,672,808	-				+1.6
3,672,808	-				+0.3
3,672,808	-				+0.0
3,672,808	-				+1.2
3,672,872	+				+0.5
3,672,872	+				+1.2
3,672,873	-				+1.9
3,672,873	-				-0.9
3,672,873	-				-0.5
3,672,973	-		Psest_3501	0.14	-0.9
3,672,988	-		Psest_3501	0.16	-0.3
3,673,029	-		Psest_3501	0.20	+0.1
3,673,029	-		Psest_3501	0.20	-1.0
3,673,029	-		Psest_3501	0.20	-0.8
3,673,029	-		Psest_3501	0.20	+1.5
3,673,040	+		Psest_3501	0.21	+0.4
3,673,041	-		Psest_3501	0.22	-1.1
3,673,114	+		Psest_3501	0.30	+0.6
3,673,115	-		Psest_3501	0.30	-1.1
3,673,265	+		Psest_3501	0.46	+0.8
3,673,265	+		Psest_3501	0.46	+1.7
3,673,265	+		Psest_3501	0.46	-2.2
3,673,266	-		Psest_3501	0.46	+1.3
3,673,266	-		Psest_3501	0.46	+1.0
3,673,266	-		Psest_3501	0.46	+0.2
3,673,266	-		Psest_3501	0.46	-0.5
3,673,429	+		Psest_3501	0.64	+1.1
3,673,429	+		Psest_3501	0.64	+1.2
3,673,464	-		Psest_3501	0.68	-0.1
3,673,464	-		Psest_3501	0.68	-0.4
3,673,493	+		Psest_3501	0.71	-0.7
3,673,493	+		Psest_3501	0.71	-0.1
3,673,494	-		Psest_3501	0.71	+1.4
3,673,494	-		Psest_3501	0.71	-0.2
3,673,494	-		Psest_3501	0.71	+1.4
3,673,494	-		Psest_3501	0.71	+1.1
3,673,508	+		Psest_3501	0.72	-1.1
3,673,508	+		Psest_3501	0.72	+0.3