Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_1947 and Psest_1948 are separated by 92 nucleotides Psest_1948 and Psest_1949 are separated by 356 nucleotides
Psest_1947: Psest_1947 - dihydroorotate dehydrogenase, subfamily 2, at 2,063,694 to 2,064,725
_1947
Psest_1948: Psest_1948 - Ribosome modulation factor, at 2,064,818 to 2,065,033
_1948
Psest_1949: Psest_1949 - Predicted N6-adenine-specific DNA methylase, at 2,065,390 to 2,067,570
_1949
Position (kb)
2064
2065
2066 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 2063.864 kb on - strand, within Psest_1947 at 2064.049 kb on + strand, within Psest_1947 at 2064.177 kb on + strand, within Psest_1947 at 2064.192 kb on + strand, within Psest_1947 at 2064.192 kb on + strand, within Psest_1947 at 2064.192 kb on + strand, within Psest_1947 at 2064.192 kb on + strand, within Psest_1947 at 2064.465 kb on + strand, within Psest_1947 at 2064.653 kb on + strand at 2064.653 kb on + strand at 2064.657 kb on + strand at 2064.657 kb on + strand at 2064.657 kb on + strand at 2064.657 kb on + strand at 2064.658 kb on - strand at 2064.767 kb on - strand at 2064.847 kb on + strand, within Psest_1948 at 2064.848 kb on - strand, within Psest_1948 at 2064.971 kb on + strand, within Psest_1948 at 2064.971 kb on + strand, within Psest_1948 at 2064.971 kb on + strand, within Psest_1948 at 2064.971 kb on + strand, within Psest_1948 at 2064.971 kb on + strand, within Psest_1948 at 2064.971 kb on + strand, within Psest_1948 at 2064.971 kb on + strand, within Psest_1948 at 2064.971 kb on + strand, within Psest_1948 at 2064.971 kb on + strand, within Psest_1948 at 2064.971 kb on + strand, within Psest_1948 at 2064.971 kb on + strand, within Psest_1948 at 2064.971 kb on + strand, within Psest_1948 at 2064.971 kb on + strand, within Psest_1948 at 2064.971 kb on + strand, within Psest_1948 at 2064.971 kb on + strand, within Psest_1948 at 2064.971 kb on + strand, within Psest_1948 at 2064.971 kb on + strand, within Psest_1948 at 2064.972 kb on - strand, within Psest_1948 at 2064.972 kb on - strand, within Psest_1948 at 2064.972 kb on - strand, within Psest_1948 at 2064.972 kb on - strand, within Psest_1948 at 2064.972 kb on - strand, within Psest_1948 at 2064.972 kb on - strand, within Psest_1948 at 2064.972 kb on - strand, within Psest_1948 at 2064.972 kb on - strand, within Psest_1948 at 2064.972 kb on - strand, within Psest_1948 at 2064.972 kb on - strand, within Psest_1948 at 2064.972 kb on - strand, within Psest_1948 at 2064.972 kb on - strand, within Psest_1948 at 2065.094 kb on + strand at 2065.103 kb on + strand at 2065.103 kb on + strand at 2065.104 kb on - strand at 2065.213 kb on + strand at 2065.213 kb on + strand at 2065.213 kb on + strand at 2065.213 kb on + strand at 2065.213 kb on + strand at 2065.213 kb on + strand at 2065.213 kb on + strand at 2065.214 kb on - strand at 2065.214 kb on - strand at 2065.214 kb on - strand at 2065.214 kb on - strand at 2065.214 kb on - strand at 2065.227 kb on - strand at 2065.251 kb on + strand at 2065.251 kb on + strand at 2065.500 kb on + strand at 2065.501 kb on - strand at 2065.782 kb on + strand, within Psest_1949 at 2065.783 kb on - strand, within Psest_1949 at 2065.821 kb on - strand, within Psest_1949 at 2066.013 kb on + strand, within Psest_1949 at 2066.024 kb on + strand, within Psest_1949 at 2066.024 kb on + strand, within Psest_1949 at 2066.025 kb on - strand, within Psest_1949
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 2,063,864 - Psest_1947 0.16 +0.8 2,064,049 + Psest_1947 0.34 +0.8 2,064,177 + Psest_1947 0.47 -0.2 2,064,192 + Psest_1947 0.48 -0.2 2,064,192 + Psest_1947 0.48 +0.8 2,064,192 + Psest_1947 0.48 +0.8 2,064,192 + Psest_1947 0.48 +0.8 2,064,465 + Psest_1947 0.75 +0.8 2,064,653 + -1.2 2,064,653 + -0.2 2,064,657 + +0.8 2,064,657 + -0.2 2,064,657 + -0.2 2,064,657 + -0.2 2,064,658 - -0.2 2,064,767 - -1.9 2,064,847 + Psest_1948 0.13 -1.0 2,064,848 - Psest_1948 0.14 +1.7 2,064,971 + Psest_1948 0.71 -0.2 2,064,971 + Psest_1948 0.71 +0.7 2,064,971 + Psest_1948 0.71 -0.0 2,064,971 + Psest_1948 0.71 +0.4 2,064,971 + Psest_1948 0.71 +1.2 2,064,971 + Psest_1948 0.71 +0.6 2,064,971 + Psest_1948 0.71 +0.0 2,064,971 + Psest_1948 0.71 +1.7 2,064,971 + Psest_1948 0.71 -1.5 2,064,971 + Psest_1948 0.71 -0.3 2,064,971 + Psest_1948 0.71 +1.5 2,064,971 + Psest_1948 0.71 -1.1 2,064,971 + Psest_1948 0.71 +0.8 2,064,971 + Psest_1948 0.71 -2.2 2,064,971 + Psest_1948 0.71 +0.2 2,064,971 + Psest_1948 0.71 +2.8 2,064,971 + Psest_1948 0.71 -0.5 2,064,972 - Psest_1948 0.71 +1.7 2,064,972 - Psest_1948 0.71 -1.4 2,064,972 - Psest_1948 0.71 +0.6 2,064,972 - Psest_1948 0.71 -0.4 2,064,972 - Psest_1948 0.71 +0.7 2,064,972 - Psest_1948 0.71 +0.4 2,064,972 - Psest_1948 0.71 +0.4 2,064,972 - Psest_1948 0.71 +1.3 2,064,972 - Psest_1948 0.71 +2.0 2,064,972 - Psest_1948 0.71 +1.4 2,064,972 - Psest_1948 0.71 +1.2 2,064,972 - Psest_1948 0.71 +0.2 2,065,094 + +0.4 2,065,103 + +0.9 2,065,103 + +0.5 2,065,104 - -0.0 2,065,213 + +4.1 2,065,213 + +1.6 2,065,213 + +0.3 2,065,213 + -0.1 2,065,213 + -0.5 2,065,213 + +1.0 2,065,213 + -0.8 2,065,214 - +2.8 2,065,214 - +2.1 2,065,214 - -0.2 2,065,214 - +0.5 2,065,214 - +0.7 2,065,227 - -1.2 2,065,251 + +0.6 2,065,251 + +0.8 2,065,500 + +0.2 2,065,501 - -0.3 2,065,782 + Psest_1949 0.18 +1.8 2,065,783 - Psest_1949 0.18 -0.1 2,065,821 - Psest_1949 0.20 +1.3 2,066,013 + Psest_1949 0.29 +0.4 2,066,024 + Psest_1949 0.29 +0.5 2,066,024 + Psest_1949 0.29 -0.4 2,066,025 - Psest_1949 0.29 +0.3
Or see this region's nucleotide sequence