Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_4323

Experiment: Neomycin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Neomycin 0.004 mg/ml
4,521,795	-				+3.7
4,521,902	+		Psest_4322	0.13	-0.1
4,522,104	-		Psest_4322	0.39	-0.0
4,522,104	-		Psest_4322	0.39	-0.4
4,522,104	-		Psest_4322	0.39	+0.5
4,522,104	-		Psest_4322	0.39	+1.6
4,522,104	-		Psest_4322	0.39	-1.2
4,522,240	+		Psest_4322	0.56	-1.8
4,522,240	+		Psest_4322	0.56	+0.2
4,522,240	+		Psest_4322	0.56	-0.8
4,522,240	+		Psest_4322	0.56	-0.4
4,522,240	+		Psest_4322	0.56	-2.4
4,522,240	+		Psest_4322	0.56	-0.3
4,522,240	+		Psest_4322	0.56	+0.4
4,522,241	-		Psest_4322	0.56	+1.9
4,522,241	-		Psest_4322	0.56	-1.2
4,522,241	-		Psest_4322	0.56	-1.0
4,522,241	-		Psest_4322	0.56	-2.3
4,522,241	-		Psest_4322	0.56	+0.2
4,522,243	-		Psest_4322	0.57	-1.1
4,522,243	-		Psest_4322	0.57	+2.0
4,522,255	-		Psest_4322	0.58	-0.2
4,522,255	-		Psest_4322	0.58	-1.8
4,522,255	-		Psest_4322	0.58	-0.1
4,522,523	+				+0.6
4,522,524	-				+0.1
4,522,906	+		Psest_4323	0.16	+0.4
4,522,907	-		Psest_4323	0.16	-0.4
4,522,907	-		Psest_4323	0.16	+0.9
4,522,907	-		Psest_4323	0.16	+0.7
4,522,907	-		Psest_4323	0.16	+3.1
4,522,936	+		Psest_4323	0.19	+0.6
4,522,936	+		Psest_4323	0.19	+0.6
4,522,936	+		Psest_4323	0.19	+0.7
4,522,936	+		Psest_4323	0.19	+2.1
4,522,936	+		Psest_4323	0.19	+1.1
4,522,937	-		Psest_4323	0.19	+0.9
4,522,937	-		Psest_4323	0.19	+1.0
4,522,937	-		Psest_4323	0.19	+1.5
4,522,942	+		Psest_4323	0.19	+1.2
4,522,942	+		Psest_4323	0.19	-2.1
4,522,942	+		Psest_4323	0.19	+0.3
4,522,942	+		Psest_4323	0.19	+1.0
4,522,943	-		Psest_4323	0.20	-1.0
4,522,943	-		Psest_4323	0.20	+0.4
4,522,951	+		Psest_4323	0.20	+0.9
4,522,966	+		Psest_4323	0.22	+0.7
4,522,966	+		Psest_4323	0.22	-1.2
4,522,967	-		Psest_4323	0.22	+2.3
4,523,011	+		Psest_4323	0.26	+0.8
4,523,012	-		Psest_4323	0.26	-1.7
4,523,023	+		Psest_4323	0.27	+0.8
4,523,024	-		Psest_4323	0.27	-0.1
4,523,041	+		Psest_4323	0.29	+1.1
4,523,042	-		Psest_4323	0.29	+1.3
4,523,042	-		Psest_4323	0.29	+1.4
4,523,158	+		Psest_4323	0.40	-0.1
4,523,158	+		Psest_4323	0.40	+1.8
4,523,158	+		Psest_4323	0.40	+1.5
4,523,159	-		Psest_4323	0.40	-0.2
4,523,161	+		Psest_4323	0.40	+2.5
4,523,161	+		Psest_4323	0.40	-0.0
4,523,161	+		Psest_4323	0.40	+0.7
4,523,197	+		Psest_4323	0.43	+1.5
4,523,317	+		Psest_4323	0.54	+0.5
4,523,317	+		Psest_4323	0.54	-0.3
4,523,317	+		Psest_4323	0.54	+0.1
4,523,317	+		Psest_4323	0.54	+0.8
4,523,317	+		Psest_4323	0.54	+2.5
4,523,317	+		Psest_4323	0.54	+1.4
4,523,317	+		Psest_4323	0.54	+1.3
4,523,317	+		Psest_4323	0.54	-0.2
4,523,317	+		Psest_4323	0.54	-1.5
4,523,317	+		Psest_4323	0.54	+0.7
4,523,317	+		Psest_4323	0.54	+1.1
4,523,317	+		Psest_4323	0.54	-1.2
4,523,318	-		Psest_4323	0.55	+1.1
4,523,318	-		Psest_4323	0.55	+0.3
4,523,318	-		Psest_4323	0.55	+0.2
4,523,318	-		Psest_4323	0.55	-0.2
4,523,318	-		Psest_4323	0.55	+1.8
4,523,318	-		Psest_4323	0.55	-1.0
4,523,318	-		Psest_4323	0.55	+1.2
4,523,318	-		Psest_4323	0.55	+0.6
4,523,318	-		Psest_4323	0.55	-0.3
4,523,318	-		Psest_4323	0.55	+1.7
4,523,318	-		Psest_4323	0.55	+1.4
4,523,318	-		Psest_4323	0.55	+0.4
4,523,318	-		Psest_4323	0.55	+1.4
4,523,318	-		Psest_4323	0.55	+1.5
4,523,318	-		Psest_4323	0.55	+1.6
4,523,318	-		Psest_4323	0.55	-1.6
4,523,318	-		Psest_4323	0.55	+0.5
4,523,318	-		Psest_4323	0.55	+1.6
4,523,318	-		Psest_4323	0.55	+0.9
4,523,371	+		Psest_4323	0.59	+2.1
4,523,372	-		Psest_4323	0.60	+2.0
4,523,434	+		Psest_4323	0.65	+0.3
4,523,435	-		Psest_4323	0.65	+1.1
4,523,435	-		Psest_4323	0.65	-0.3
4,523,435	-		Psest_4323	0.65	+0.1
4,523,435	-		Psest_4323	0.65	+3.6
4,523,559	+		Psest_4323	0.77	+0.0
4,523,662	+		Psest_4323	0.87	+0.8
4,523,714	-				+1.5
4,523,714	-				+1.5
4,523,717	+				+0.5
4,523,718	-				+0.3
4,523,718	-				+2.1
4,523,718	-				-0.9
4,523,718	-				+0.3
4,523,718	-				+0.3
4,523,718	-				+1.5
4,523,727	+				+0.3
4,523,861	+				-0.3
4,523,861	+				+0.8
4,523,861	+				-0.2
4,523,861	+				+0.9
4,523,861	+				+0.5
4,523,861	+				+1.6
4,523,861	+				+1.7
4,523,861	+				+1.3
4,523,861	+				+2.6
4,523,861	+				-1.0
4,523,861	+				-0.1
4,523,861	+				+0.4
4,523,861	+				+0.5
4,523,861	+				+0.6
4,523,861	+				+0.2
4,523,861	+				+2.0
4,523,861	+				+1.5
4,523,862	-				-0.5
4,523,862	-				+1.3
4,523,862	-				+0.8
4,523,862	-				-2.1
4,523,862	-				+1.5
4,523,862	-				-3.2
4,523,862	-				-2.0
4,523,864	+				+0.5
4,523,864	+				+0.0
4,524,066	-				-0.1
4,524,066	-				-1.4
4,524,070	+				+0.6
4,524,070	+				-0.5
4,524,070	+				-0.1
4,524,071	-				+0.1
4,524,071	-				-0.9
4,524,071	-				+0.2
4,524,071	-				+0.4
4,524,071	-				-1.2
4,524,084	-				+0.2
4,524,100	-				-0.5
4,524,100	-				+0.6
4,524,236	+		Psest_4324	0.12	+0.5
4,524,237	-		Psest_4324	0.13	+2.2
4,524,237	-		Psest_4324	0.13	+0.3
4,524,237	-		Psest_4324	0.13	+0.1
4,524,237	-		Psest_4324	0.13	-0.7
4,524,237	-		Psest_4324	0.13	-0.6
4,524,340	+		Psest_4324	0.22	-1.3
4,524,340	+		Psest_4324	0.22	+1.4
4,524,340	+		Psest_4324	0.22	+0.6
4,524,341	-		Psest_4324	0.22	+0.5
4,524,341	-		Psest_4324	0.22	-0.1
4,524,341	-		Psest_4324	0.22	-1.9
4,524,341	-		Psest_4324	0.22	-0.1
4,524,341	-		Psest_4324	0.22	-0.6
4,524,505	+		Psest_4324	0.38	-3.4
4,524,505	+		Psest_4324	0.38	-1.2
4,524,744	-		Psest_4324	0.60	-2.1