Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3908

Experiment: Neomycin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Neomycin 0.004 mg/ml
4,076,459	+				+0.6
4,076,460	-				+1.2
4,076,460	-				+0.3
4,076,811	+		Psest_3907	0.26	+0.1
4,076,811	+		Psest_3907	0.26	-0.5
4,076,811	+		Psest_3907	0.26	+0.9
4,076,811	+		Psest_3907	0.26	-1.0
4,076,811	+		Psest_3907	0.26	+0.3
4,076,811	+		Psest_3907	0.26	+1.9
4,076,811	+		Psest_3907	0.26	-0.7
4,076,811	+		Psest_3907	0.26	+0.3
4,076,811	+		Psest_3907	0.26	+0.5
4,076,811	+		Psest_3907	0.26	+1.1
4,076,811	+		Psest_3907	0.26	+0.5
4,076,811	+		Psest_3907	0.26	-0.9
4,076,811	+		Psest_3907	0.26	-1.4
4,076,812	-		Psest_3907	0.26	+0.3
4,076,812	-		Psest_3907	0.26	+0.1
4,076,812	-		Psest_3907	0.26	+0.5
4,076,812	-		Psest_3907	0.26	+0.5
4,076,812	-		Psest_3907	0.26	+0.9
4,076,812	-		Psest_3907	0.26	+0.5
4,076,812	-		Psest_3907	0.26	+0.0
4,076,812	-		Psest_3907	0.26	-0.0
4,076,812	-		Psest_3907	0.26	-0.7
4,076,812	-		Psest_3907	0.26	-1.1
4,076,812	-		Psest_3907	0.26	-1.5
4,076,812	-		Psest_3907	0.26	-0.3
4,076,812	-		Psest_3907	0.26	-1.9
4,076,812	-		Psest_3907	0.26	+0.1
4,076,812	-		Psest_3907	0.26	-1.1
4,076,812	-		Psest_3907	0.26	+0.0
4,076,812	-		Psest_3907	0.26	-0.0
4,076,812	-		Psest_3907	0.26	+0.0
4,076,812	-		Psest_3907	0.26	-1.5
4,076,812	-		Psest_3907	0.26	+4.4
4,076,812	-		Psest_3907	0.26	+1.0
4,076,812	-		Psest_3907	0.26	-0.6
4,076,812	-		Psest_3907	0.26	-0.2
4,076,916	+		Psest_3907	0.41	-0.8
4,077,339	+				-1.9
4,077,527	-		Psest_3908	0.44	+0.9
4,077,796	+				-0.1
4,077,796	+				-1.3
4,077,872	-				-0.0
4,077,875	-				+2.3
4,077,875	-				-0.3
4,077,875	-				+1.3
4,078,060	+		Psest_3909	0.23	+0.1
4,078,060	+		Psest_3909	0.23	-0.3
4,078,061	-		Psest_3909	0.23	+0.2
4,078,061	-		Psest_3909	0.23	+1.3
4,078,061	-		Psest_3909	0.23	+0.0
4,078,061	-		Psest_3909	0.23	+1.0
4,078,145	-		Psest_3909	0.29	-0.9
4,078,297	+		Psest_3909	0.41	+0.4
4,078,297	+		Psest_3909	0.41	-1.0
4,078,297	+		Psest_3909	0.41	-0.0
4,078,298	-		Psest_3909	0.42	+0.4
4,078,298	-		Psest_3909	0.42	-1.6
4,078,298	-		Psest_3909	0.42	+0.0
4,078,334	-		Psest_3909	0.44	-0.1
4,078,396	+		Psest_3909	0.49	-0.2
4,078,498	+		Psest_3909	0.57	+1.0
4,078,498	+		Psest_3909	0.57	-1.6
4,078,498	+		Psest_3909	0.57	-0.0
4,078,498	+		Psest_3909	0.57	-0.0
4,078,498	+		Psest_3909	0.57	-0.1
4,078,498	+		Psest_3909	0.57	+0.4
4,078,498	+		Psest_3909	0.57	+1.9
4,078,499	-		Psest_3909	0.57	-0.8
4,078,570	+		Psest_3909	0.63	-0.6
4,078,571	-		Psest_3909	0.63	+0.7
4,078,571	-		Psest_3909	0.63	-2.4