Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3882

Experiment: Neomycin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Neomycin 0.004 mg/ml
4,051,547	+		Psest_3880	0.54	-0.8
4,051,547	+		Psest_3880	0.54	-0.5
4,051,547	+		Psest_3880	0.54	+0.2
4,051,548	-		Psest_3880	0.54	+1.5
4,051,548	-		Psest_3880	0.54	+0.6
4,051,548	-		Psest_3880	0.54	+0.3
4,051,548	-		Psest_3880	0.54	-0.9
4,051,548	-		Psest_3880	0.54	-0.2
4,051,548	-		Psest_3880	0.54	+0.8
4,051,572	+		Psest_3880	0.57	-0.6
4,051,572	+		Psest_3880	0.57	+0.3
4,051,572	+		Psest_3880	0.57	-1.1
4,051,572	+		Psest_3880	0.57	+0.1
4,051,572	+		Psest_3880	0.57	+0.3
4,051,573	-		Psest_3880	0.57	+0.1
4,051,573	-		Psest_3880	0.57	-0.4
4,051,573	-		Psest_3880	0.57	+0.7
4,051,603	-		Psest_3880	0.60	+0.2
4,051,603	-		Psest_3880	0.60	-0.9
4,051,603	-		Psest_3880	0.60	-1.4
4,051,603	-		Psest_3880	0.60	+0.3
4,051,796	+		Psest_3880	0.82	+0.3
4,051,797	-		Psest_3880	0.82	+0.7
4,051,797	-		Psest_3880	0.82	+0.1
4,051,800	+		Psest_3880	0.83	-0.1
4,051,800	+		Psest_3880	0.83	+0.8
4,051,800	+		Psest_3880	0.83	+1.1
4,051,800	+		Psest_3880	0.83	-0.5
4,051,800	+		Psest_3880	0.83	-0.9
4,051,801	-		Psest_3880	0.83	-0.1
4,051,801	-		Psest_3880	0.83	-0.2
4,051,801	-		Psest_3880	0.83	-0.1
4,051,801	-		Psest_3880	0.83	-0.5
4,051,801	-		Psest_3880	0.83	+0.1
4,051,801	-				+1.9
4,051,801	-		Psest_3880	0.83	+1.5
4,051,801	-		Psest_3880	0.83	+1.0
4,051,801	-		Psest_3880	0.83	-0.7
4,051,878	+				+0.8
4,051,878	+				+1.9
4,051,951	-				+0.7
4,052,063	-		Psest_3881	0.16	+0.2
4,052,501	-				+2.2
4,052,540	-				+3.2
4,052,759	+		Psest_3882	0.38	-0.4
4,052,759	+		Psest_3882	0.38	+1.6
4,052,759	+		Psest_3882	0.38	+2.4
4,052,759	+		Psest_3882	0.38	-1.1
4,052,759	+		Psest_3882	0.38	-0.2
4,052,759	+		Psest_3882	0.38	+0.3
4,052,759	+		Psest_3882	0.38	+0.0
4,052,759	+		Psest_3882	0.38	-0.5
4,052,759	+		Psest_3882	0.38	-0.5
4,052,759	+		Psest_3882	0.38	+1.6
4,052,759	+		Psest_3882	0.38	+1.0
4,052,759	+		Psest_3882	0.38	+0.6
4,052,759	+		Psest_3882	0.38	+1.2
4,052,759	+		Psest_3882	0.38	+1.3
4,052,759	+		Psest_3882	0.38	+2.3
4,052,759	+		Psest_3882	0.38	+2.9
4,052,759	+		Psest_3882	0.38	-2.0
4,052,760	-		Psest_3882	0.38	+2.8
4,052,760	-		Psest_3882	0.38	+1.8
4,052,760	-		Psest_3882	0.38	+3.8
4,052,760	-		Psest_3882	0.38	+1.6
4,052,760	-		Psest_3882	0.38	+2.9
4,052,768	+		Psest_3882	0.40	+0.6
4,052,768	+		Psest_3882	0.40	-0.6
4,052,768	+		Psest_3882	0.40	+1.0
4,052,769	-		Psest_3882	0.40	+3.2
4,052,769	-		Psest_3882	0.40	+1.7
4,052,769	-		Psest_3882	0.40	+2.7
4,052,769	-		Psest_3882	0.40	+1.8
4,052,769	-		Psest_3882	0.40	+2.5
4,052,834	+		Psest_3882	0.50	+1.2
4,052,834	+		Psest_3882	0.50	+1.5
4,052,835	-		Psest_3882	0.51	+2.5
4,052,835	-		Psest_3882	0.51	+2.8
4,052,835	-		Psest_3882	0.51	+1.9
4,052,835	-		Psest_3882	0.51	+2.2
4,052,925	-		Psest_3882	0.66	+4.1
4,052,925	-		Psest_3882	0.66	+2.4
4,053,087	+				+1.6
4,053,088	-				+4.5
4,053,088	-				+4.5
4,053,088	-				+4.1
4,053,108	-				+2.4
4,053,108	-				+3.4
4,053,108	-				+3.1
4,053,108	-				+1.9
4,053,108	-				+4.0
4,053,122	+				+1.1
4,053,122	+				+0.1
4,053,123	-				+2.9
4,053,123	-				+4.3
4,053,140	+				+0.1
4,053,140	+				-0.5
4,053,141	-				+1.9
4,053,141	-				+3.5
4,053,141	-				+2.0
4,053,372	-		Psest_3883	0.25	+3.7
4,053,431	+		Psest_3883	0.33	+4.3
4,053,495	+		Psest_3883	0.43	+2.6
4,053,495	+		Psest_3883	0.43	+3.6
4,053,495	+		Psest_3883	0.43	+4.3
4,053,495	+		Psest_3883	0.43	+5.2
4,053,495	+		Psest_3883	0.43	+3.3
4,053,495	+		Psest_3883	0.43	+2.9
4,053,496	-		Psest_3883	0.43	+5.7
4,053,496	-		Psest_3883	0.43	+3.3
4,053,496	-		Psest_3883	0.43	+3.3
4,053,496	-		Psest_3883	0.43	+5.3
4,053,496	-		Psest_3883	0.43	+4.9
4,053,661	-		Psest_3883	0.67	+2.8
4,053,666	+		Psest_3883	0.68	+3.5
4,053,681	+		Psest_3883	0.70	+4.0
4,053,739	-		Psest_3883	0.79	+4.7
4,053,739	-		Psest_3883	0.79	+2.2
4,053,739	-		Psest_3883	0.79	+4.5
4,053,855	+				+3.9