Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3701

Experiment: Neomycin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Neomycin 0.004 mg/ml
3,864,665	+		Psest_3699	0.84	+0.1
3,864,678	+		Psest_3699	0.85	-1.6
3,864,678	+		Psest_3699	0.85	+1.3
3,864,678	+		Psest_3699	0.85	+0.7
3,864,678	+		Psest_3699	0.85	+0.1
3,864,678	+		Psest_3699	0.85	+1.5
3,864,679	-		Psest_3699	0.85	-1.5
3,864,679	-		Psest_3699	0.85	-1.0
3,864,679	-		Psest_3699	0.85	-0.6
3,864,679	-		Psest_3699	0.85	+0.7
3,864,679	-		Psest_3699	0.85	+0.3
3,864,679	-		Psest_3699	0.85	+0.2
3,864,694	-		Psest_3699	0.86	+1.4
3,864,720	+		Psest_3699	0.88	+1.1
3,864,720	+		Psest_3699	0.88	+0.1
3,864,723	+		Psest_3699	0.88	-0.7
3,864,723	+		Psest_3699	0.88	+0.2
3,864,724	-		Psest_3699	0.88	+0.2
3,864,802	-				+0.5
3,864,802	-				-0.1
3,865,295	-		Psest_3700	0.82	-1.1
3,865,343	-				-2.1
3,865,343	-				-0.3
3,865,392	+				+0.3
3,865,689	-		Psest_3701	0.26	+0.6
3,865,834	-		Psest_3701	0.38	+1.1
3,865,834	-		Psest_3701	0.38	+0.5
3,866,129	+		Psest_3701	0.62	+2.9
3,866,130	-		Psest_3701	0.63	+0.1
3,866,130	-		Psest_3701	0.63	+1.5
3,866,130	-		Psest_3701	0.63	+0.4
3,866,130	-		Psest_3701	0.63	-0.9
3,866,221	-		Psest_3701	0.70	-0.9
3,866,492	+				-1.2
3,866,492	+				-0.1
3,866,546	+				-0.9
3,866,601	+				+0.5
3,866,834	+		Psest_3702	0.58	-0.4
3,866,834	+		Psest_3702	0.58	+0.4
3,866,835	-		Psest_3702	0.58	-1.5
3,866,835	-		Psest_3702	0.58	-0.8
3,866,875	-		Psest_3702	0.67	-0.4
3,867,002	+				-0.6
3,867,003	-				-0.1
3,867,003	-				-1.3
3,867,003	-				-1.6
3,867,006	+				+2.1
3,867,006	+				-1.5
3,867,006	+				-0.8
3,867,006	+				+0.8
3,867,006	+				+1.3
3,867,006	+				+1.4
3,867,006	+				-0.8
3,867,007	-				+1.0
3,867,007	-				-0.1
3,867,007	-				-1.7
3,867,007	-				+0.8
3,867,007	-				+0.5
3,867,007	-				-2.0
3,867,007	-				+0.3
3,867,007	-				+1.0
3,867,161	+		Psest_3703	0.19	+2.3
3,867,161	+		Psest_3703	0.19	+0.3
3,867,161	+		Psest_3703	0.19	+0.7
3,867,161	+		Psest_3703	0.19	-1.1
3,867,161	+		Psest_3703	0.19	+0.8
3,867,262	+		Psest_3703	0.33	+1.1
3,867,263	-		Psest_3703	0.33	+0.4
3,867,263	-		Psest_3703	0.33	+0.6
3,867,266	-		Psest_3703	0.33	+0.4
3,867,367	+		Psest_3703	0.47	+0.8
3,867,367	+		Psest_3703	0.47	-1.9
3,867,367	+		Psest_3703	0.47	-0.4
3,867,367	+		Psest_3703	0.47	+0.2
3,867,367	+		Psest_3703	0.47	-1.8
3,867,367	+		Psest_3703	0.47	-0.3
3,867,367	+		Psest_3703	0.47	+0.1
3,867,367	+		Psest_3703	0.47	+0.8
3,867,367	+		Psest_3703	0.47	-0.8
3,867,367	+		Psest_3703	0.47	-0.2
3,867,367	+		Psest_3703	0.47	+0.3
3,867,367	+		Psest_3703	0.47	+1.8
3,867,367	+		Psest_3703	0.47	+0.2
3,867,367	+		Psest_3703	0.47	+0.5
3,867,367	+		Psest_3703	0.47	-0.8
3,867,367	+		Psest_3703	0.47	-0.1
3,867,368	-		Psest_3703	0.47	-0.1
3,867,368	-		Psest_3703	0.47	+1.7
3,867,368	-		Psest_3703	0.47	-0.7
3,867,368	-		Psest_3703	0.47	-0.1
3,867,368	-		Psest_3703	0.47	+0.6
3,867,368	-		Psest_3703	0.47	-0.2
3,867,368	-		Psest_3703	0.47	+2.1
3,867,368	-		Psest_3703	0.47	+0.1
3,867,368	-		Psest_3703	0.47	-2.0
3,867,368	-		Psest_3703	0.47	+1.9
3,867,368	-		Psest_3703	0.47	+0.1
3,867,368	-		Psest_3703	0.47	-0.5
3,867,368	-		Psest_3703	0.47	+1.4
3,867,368	-		Psest_3703	0.47	+0.3
3,867,368	-		Psest_3703	0.47	+0.4
3,867,368	-		Psest_3703	0.47	+1.7
3,867,368	-		Psest_3703	0.47	+0.5
3,867,368	-		Psest_3703	0.47	-0.1
3,867,368	-		Psest_3703	0.47	-0.5
3,867,368	-		Psest_3703	0.47	-0.1
3,867,368	-		Psest_3703	0.47	-0.2
3,867,478	+		Psest_3703	0.63	-0.9
3,867,478	+		Psest_3703	0.63	-0.9
3,867,478	+		Psest_3703	0.63	-0.3
3,867,478	+		Psest_3703	0.63	+0.3
3,867,478	+		Psest_3703	0.63	+0.3
3,867,478	+		Psest_3703	0.63	-0.4
3,867,478	+		Psest_3703	0.63	+0.1
3,867,478	+		Psest_3703	0.63	-1.7
3,867,479	-		Psest_3703	0.63	+0.3
3,867,479	-		Psest_3703	0.63	-1.8
3,867,479	-		Psest_3703	0.63	-0.9
3,867,479	-		Psest_3703	0.63	+1.0
3,867,479	-		Psest_3703	0.63	-0.8
3,867,479	-		Psest_3703	0.63	+1.2
3,867,479	-		Psest_3703	0.63	-0.5
3,867,479	-		Psest_3703	0.63	-0.9
3,867,479	-		Psest_3703	0.63	-0.1
3,867,479	-		Psest_3703	0.63	-0.5