Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3484

Experiment: Neomycin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Neomycin 0.004 mg/ml
3,652,320	-				-1.8
3,652,347	+				+1.5
3,652,348	-				+0.6
3,652,355	+				+1.4
3,652,495	+				+0.8
3,652,573	+		Psest_3483	0.19	+0.2
3,652,573	+		Psest_3483	0.19	-1.2
3,652,660	+		Psest_3483	0.30	-1.2
3,652,660	+		Psest_3483	0.30	+1.3
3,652,660	+		Psest_3483	0.30	+0.6
3,652,660	+		Psest_3483	0.30	-1.2
3,652,661	-		Psest_3483	0.30	+0.3
3,652,661	-		Psest_3483	0.30	+2.4
3,652,661	-		Psest_3483	0.30	-1.8
3,652,661	-		Psest_3483	0.30	-0.3
3,652,661	-		Psest_3483	0.30	+0.6
3,652,661	-		Psest_3483	0.30	-1.7
3,653,116	+		Psest_3483	0.88	+0.6
3,653,116	+		Psest_3483	0.88	+0.8
3,653,116	+		Psest_3483	0.88	+0.4
3,653,173	+				+0.4
3,653,173	+				+1.3
3,653,173	+				+1.0
3,653,173	+				-2.2
3,653,173	+				-1.7
3,653,173	+				-0.6
3,653,179	+				+0.1
3,653,179	+				-0.6
3,653,180	-				-0.9
3,653,207	+				+4.1
3,653,207	+				+1.4
3,653,208	-				-0.6
3,653,603	+		Psest_3484	0.53	-0.4
3,653,604	-		Psest_3484	0.53	+2.4
3,653,624	+		Psest_3484	0.55	+0.9
3,653,624	+		Psest_3484	0.55	+0.9
3,653,624	+		Psest_3484	0.55	-0.7
3,653,624	+		Psest_3484	0.55	+1.1
3,653,624	+		Psest_3484	0.55	+0.9
3,653,624	+		Psest_3484	0.55	+0.0
3,653,625	-		Psest_3484	0.55	-0.3
3,653,625	-		Psest_3484	0.55	+1.8
3,653,670	-		Psest_3484	0.61	+0.4
3,653,670	-		Psest_3484	0.61	+0.8
3,653,778	-		Psest_3484	0.76	+0.9
3,653,949	+				+2.0
3,653,950	-				-0.4
3,654,153	-		Psest_3485	0.12	-0.3
3,654,176	+		Psest_3485	0.14	+0.7
3,654,264	-		Psest_3485	0.19	-0.7
3,654,444	-		Psest_3485	0.31	+0.3
3,654,444	-		Psest_3485	0.31	-0.5
3,654,444	-		Psest_3485	0.31	+0.0
3,654,444	-		Psest_3485	0.31	+0.8
3,654,556	+		Psest_3485	0.38	+2.2
3,654,630	-		Psest_3485	0.43	-0.6
3,654,630	-		Psest_3485	0.43	+0.2
3,654,683	+		Psest_3485	0.47	+0.2
3,654,683	+		Psest_3485	0.47	-1.0
3,654,716	-		Psest_3485	0.49	-1.0
3,654,809	+		Psest_3485	0.55	+1.9
3,654,809	+		Psest_3485	0.55	+0.4
3,654,809	+		Psest_3485	0.55	-0.2
3,654,810	-		Psest_3485	0.55	-0.4
3,654,810	-		Psest_3485	0.55	+0.2
3,654,810	-		Psest_3485	0.55	-0.4
3,654,810	-		Psest_3485	0.55	+1.2
3,654,810	-		Psest_3485	0.55	+0.4
3,654,810	-		Psest_3485	0.55	-0.4
3,654,810	-		Psest_3485	0.55	-0.3
3,654,810	-		Psest_3485	0.55	-0.7
3,654,821	+		Psest_3485	0.56	-1.4
3,654,822	-		Psest_3485	0.56	+0.7
3,654,822	-		Psest_3485	0.56	+0.8
3,654,902	+		Psest_3485	0.61	+0.6
3,654,902	+		Psest_3485	0.61	-1.4
3,654,902	+		Psest_3485	0.61	+1.1
3,654,903	-		Psest_3485	0.61	-0.2
3,654,903	-		Psest_3485	0.61	+0.2
3,654,903	-		Psest_3485	0.61	+1.2
3,654,903	-		Psest_3485	0.61	-0.4