Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3367

Experiment: Neomycin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Neomycin 0.004 mg/ml
3,535,834	+		Psest_3366	0.55	-1.4
3,535,834	+		Psest_3366	0.55	+0.4
3,535,834	+		Psest_3366	0.55	-1.8
3,535,835	-		Psest_3366	0.55	+0.8
3,535,835	-		Psest_3366	0.55	-0.3
3,535,835	-		Psest_3366	0.55	-0.1
3,535,871	-		Psest_3366	0.57	-2.0
3,535,871	-		Psest_3366	0.57	+0.4
3,535,874	-		Psest_3366	0.57	-0.7
3,535,903	+		Psest_3366	0.58	+0.5
3,535,904	-		Psest_3366	0.58	-1.5
3,536,172	+		Psest_3366	0.72	+0.1
3,536,172	+		Psest_3366	0.72	+0.9
3,536,173	-		Psest_3366	0.72	-0.3
3,536,173	-		Psest_3366	0.72	-0.7
3,536,173	-		Psest_3366	0.72	-1.4
3,536,173	-		Psest_3366	0.72	+0.5
3,536,173	-		Psest_3366	0.72	+0.0
3,536,392	+		Psest_3366	0.84	-0.0
3,536,392	+		Psest_3366	0.84	+1.4
3,536,392	+		Psest_3366	0.84	+0.8
3,536,392	+		Psest_3366	0.84	-0.4
3,536,393	-		Psest_3366	0.84	+1.8
3,536,393	-		Psest_3366	0.84	+0.3
3,536,393	-		Psest_3366	0.84	-0.8
3,536,396	+		Psest_3366	0.84	+0.8
3,536,396	+		Psest_3366	0.84	+0.3
3,536,396	+		Psest_3366	0.84	+0.1
3,536,396	+		Psest_3366	0.84	+0.6
3,536,396	+		Psest_3366	0.84	-2.5
3,536,396	+		Psest_3366	0.84	-1.3
3,536,397	-		Psest_3366	0.84	-1.3
3,536,397	-		Psest_3366	0.84	-1.1
3,536,397	-		Psest_3366	0.84	+1.0
3,536,397	-		Psest_3366	0.84	-0.3
3,536,397	-		Psest_3366	0.84	-1.1
3,536,397	-		Psest_3366	0.84	+1.0
3,536,404	+		Psest_3366	0.85	+0.2
3,536,605	+				+0.6
3,536,606	-				+1.0
3,536,633	-				+0.1
3,536,633	-				+0.7
3,536,633	-				-1.0
3,536,633	-				-0.4
3,536,636	+				-0.6
3,536,636	+				+0.6
3,536,636	+				+0.6
3,536,637	-				-0.6
3,536,637	-				-2.3
3,536,678	+				+0.6
3,536,679	-				+1.4
3,536,679	-				+0.5
3,536,679	-				+0.6
3,536,685	-				+1.0
3,536,685	-				-0.9
3,536,685	-				-1.2
3,536,685	-				+0.5
3,536,692	-				-1.3
3,536,724	+				-0.8
3,536,725	-				-0.2
3,536,725	-				+0.4
3,537,147	+		Psest_3367	0.87	+1.2
3,537,251	-				+0.5
3,537,295	+				-1.6
3,537,295	+				+1.2
3,537,296	-				+0.4
3,537,296	-				-0.4
3,537,296	-				+1.0
3,537,296	-				-1.3
3,537,296	-				+2.6
3,537,516	+		Psest_3368	0.16	-2.2
3,537,516	+		Psest_3368	0.16	+1.2
3,537,517	-		Psest_3368	0.16	-1.0
3,537,517	-		Psest_3368	0.16	+0.1
3,537,517	-		Psest_3368	0.16	+0.3
3,537,517	-		Psest_3368	0.16	+1.5
3,537,517	-		Psest_3368	0.16	-0.2
3,537,517	-		Psest_3368	0.16	+2.7
3,537,517	-		Psest_3368	0.16	-1.6
3,537,517	-		Psest_3368	0.16	-0.2
3,537,517	-		Psest_3368	0.16	+0.5
3,537,517	-		Psest_3368	0.16	-1.9
3,537,518	+		Psest_3368	0.16	+1.5
3,537,518	+		Psest_3368	0.16	-1.0
3,537,518	+		Psest_3368	0.16	+0.5
3,537,518	+		Psest_3368	0.16	-0.1
3,537,518	+		Psest_3368	0.16	+1.4
3,537,518	+		Psest_3368	0.16	-0.4
3,537,518	+		Psest_3368	0.16	-0.8
3,537,518	+		Psest_3368	0.16	-2.4
3,537,518	+		Psest_3368	0.16	-1.5
3,537,519	-		Psest_3368	0.16	+0.3
3,537,519	-		Psest_3368	0.16	+1.3
3,537,519	-		Psest_3368	0.16	-0.2
3,537,519	-		Psest_3368	0.16	-0.1
3,537,519	-		Psest_3368	0.16	-1.7
3,537,519	-		Psest_3368	0.16	-0.7
3,537,519	-		Psest_3368	0.16	+0.6
3,537,519	-		Psest_3368	0.16	+0.7
3,537,519	-		Psest_3368	0.16	-0.0
3,537,519	-		Psest_3368	0.16	-0.0
3,537,519	-		Psest_3368	0.16	-0.7
3,537,519	-		Psest_3368	0.16	+1.4
3,537,519	-		Psest_3368	0.16	-2.2
3,537,519	-		Psest_3368	0.16	-0.4
3,537,519	-		Psest_3368	0.16	-1.2
3,537,519	-		Psest_3368	0.16	+0.6
3,537,519	-		Psest_3368	0.16	-0.4
3,537,519	-		Psest_3368	0.16	+0.6
3,537,519	-		Psest_3368	0.16	-0.2
3,537,519	-		Psest_3368	0.16	-1.3
3,537,519	-		Psest_3368	0.16	+1.0
3,537,519	-		Psest_3368	0.16	+0.2
3,537,519	-		Psest_3368	0.16	+0.9
3,537,519	-		Psest_3368	0.16	+0.3
3,537,520	+		Psest_3368	0.16	+0.8
3,537,520	+		Psest_3368	0.16	+0.8
3,537,520	+		Psest_3368	0.16	-0.3
3,537,520	+		Psest_3368	0.16	+0.5
3,537,520	+		Psest_3368	0.16	+0.4
3,537,520	+		Psest_3368	0.16	+0.7
3,537,520	+		Psest_3368	0.16	-0.2
3,537,520	+		Psest_3368	0.16	+1.4
3,537,520	+		Psest_3368	0.16	-0.3
3,537,520	+		Psest_3368	0.16	+1.2
3,537,520	+		Psest_3368	0.16	+0.2
3,537,520	+		Psest_3368	0.16	+2.1
3,537,520	+		Psest_3368	0.16	-1.6
3,537,520	+		Psest_3368	0.16	-1.6
3,537,521	-		Psest_3368	0.16	+1.8
3,537,521	-		Psest_3368	0.16	+1.4
3,537,521	-		Psest_3368	0.16	+0.3
3,537,521	-		Psest_3368	0.16	-0.6
3,537,521	-		Psest_3368	0.16	-0.9
3,537,521	-		Psest_3368	0.16	+0.7
3,537,521	-		Psest_3368	0.16	+1.1
3,537,521	-		Psest_3368	0.16	-0.0
3,537,521	-		Psest_3368	0.16	-1.0
3,537,521	-		Psest_3368	0.16	+0.2
3,537,521	-		Psest_3368	0.16	-0.7
3,537,521	-		Psest_3368	0.16	+0.4
3,537,521	-		Psest_3368	0.16	-0.9
3,537,521	-		Psest_3368	0.16	+1.9
3,538,019	+		Psest_3368	0.61	-2.2
3,538,036	+		Psest_3368	0.63	-0.5
3,538,037	-		Psest_3368	0.63	+0.2
3,538,037	-		Psest_3368	0.63	-0.1
3,538,037	-		Psest_3368	0.63	-2.3
3,538,037	-		Psest_3368	0.63	+0.6
3,538,051	+		Psest_3368	0.64	-1.9
3,538,052	-		Psest_3368	0.64	-2.2
3,538,052	-		Psest_3368	0.64	+0.4
3,538,052	-		Psest_3368	0.64	-3.0
3,538,172	-		Psest_3368	0.75	+0.1