Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3306

Experiment: Neomycin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Neomycin 0.004 mg/ml
3,470,406	+		Psest_3304	0.31	+1.6
3,470,407	-		Psest_3304	0.31	+3.0
3,470,407	-		Psest_3304	0.31	+0.6
3,470,407	-		Psest_3304	0.31	+2.2
3,470,418	+		Psest_3304	0.33	+4.5
3,470,496	-		Psest_3304	0.45	+2.4
3,470,518	-		Psest_3304	0.48	+4.7
3,470,518	-		Psest_3304	0.48	+2.4
3,470,538	+		Psest_3304	0.52	+1.1
3,470,538	+		Psest_3304	0.52	+0.8
3,470,611	-		Psest_3304	0.63	+2.4
3,470,611	-		Psest_3304	0.63	+0.4
3,470,685	+		Psest_3304	0.74	+2.5
3,470,686	-		Psest_3304	0.74	+3.4
3,470,686	-		Psest_3304	0.74	+1.4
3,470,709	+		Psest_3304	0.78	+2.8
3,470,710	-		Psest_3304	0.78	+2.5
3,470,710	-		Psest_3304	0.78	+2.9
3,470,796	+				+3.0
3,470,796	+				+2.5
3,470,796	+				+2.3
3,470,796	+				+3.0
3,470,796	+				+4.4
3,470,796	+				+2.5
3,470,796	+				+3.3
3,470,797	-				+3.6
3,470,797	-				+3.0
3,470,797	-				+3.3
3,470,797	-				+2.6
3,470,797	-				+1.4
3,470,797	-				+3.8
3,470,797	-				+1.8
3,470,858	-				+1.5
3,470,871	+				+2.0
3,470,871	+				+2.2
3,470,872	-				+1.5
3,470,872	-				+2.5
3,470,876	-				+1.7
3,470,911	+		Psest_3305	0.10	+4.1
3,470,911	+		Psest_3305	0.10	+3.2
3,470,912	-		Psest_3305	0.11	+2.1
3,470,912	-		Psest_3305	0.11	+1.6
3,470,914	+		Psest_3305	0.11	+2.0
3,470,914	+		Psest_3305	0.11	+3.4
3,470,993	+		Psest_3305	0.28	+3.4
3,470,993	+		Psest_3305	0.28	+2.7
3,470,993	+		Psest_3305	0.28	+4.2
3,470,993	+		Psest_3305	0.28	+0.9
3,470,993	+		Psest_3305	0.28	+2.9
3,470,994	-		Psest_3305	0.29	+2.0
3,470,994	-		Psest_3305	0.29	+3.7
3,470,994	-		Psest_3305	0.29	+2.0
3,470,994	-		Psest_3305	0.29	+3.0
3,470,994	-		Psest_3305	0.29	+2.8
3,471,092	+		Psest_3305	0.50	+0.9
3,471,092	+		Psest_3305	0.50	+3.5
3,471,092	+		Psest_3305	0.50	+1.1
3,471,092	+		Psest_3305	0.50	+3.6
3,471,092	+		Psest_3305	0.50	+2.1
3,471,092	+		Psest_3305	0.50	+0.9
3,471,092	+		Psest_3305	0.50	+1.7
3,471,093	-		Psest_3305	0.50	+2.9
3,471,093	-		Psest_3305	0.50	+3.2
3,471,093	-		Psest_3305	0.50	+2.1
3,471,096	+		Psest_3305	0.51	+2.2
3,471,096	+		Psest_3305	0.51	+3.4
3,471,192	-		Psest_3305	0.72	+2.5
3,471,197	+		Psest_3305	0.73	+3.0
3,471,197	+		Psest_3305	0.73	+0.1
3,471,197	+		Psest_3305	0.73	+2.8
3,471,198	-		Psest_3305	0.73	+2.8
3,471,206	+		Psest_3305	0.75	+1.7
3,471,207	-		Psest_3305	0.75	+1.2
3,471,207	-		Psest_3305	0.75	+1.4
3,471,207	-		Psest_3305	0.75	+1.0
3,471,385	+				+1.4
3,471,385	+				+0.7
3,471,385	+				+1.1
3,471,385	+				+1.2
3,471,385	+				+1.4
3,471,385	+				+4.9
3,471,416	+		Psest_3306	0.12	+0.6
3,471,416	+		Psest_3306	0.12	+1.6
3,471,565	+		Psest_3306	0.31	+0.9
3,471,615	+		Psest_3306	0.37	+1.9
3,471,615	+		Psest_3306	0.37	+2.3
3,471,682	+		Psest_3306	0.45	+1.6
3,471,682	+		Psest_3306	0.45	+0.5
3,471,682	+		Psest_3306	0.45	-0.4
3,471,682	+		Psest_3306	0.45	+1.6
3,471,682	+		Psest_3306	0.45	+2.3
3,471,682	+		Psest_3306	0.45	+2.7
3,471,682	+		Psest_3306	0.45	+0.2
3,471,883	+		Psest_3306	0.70	+2.2
3,472,112	+				+3.3
3,472,280	+		Psest_3307	0.21	+2.4
3,472,280	+		Psest_3307	0.21	+2.3
3,472,280	+		Psest_3307	0.21	+1.8
3,472,280	+		Psest_3307	0.21	+3.2
3,472,280	+		Psest_3307	0.21	+5.1
3,472,280	+		Psest_3307	0.21	+1.5
3,472,280	+		Psest_3307	0.21	+1.1
3,472,280	+		Psest_3307	0.21	+2.3
3,472,280	+		Psest_3307	0.21	+3.6
3,472,280	+		Psest_3307	0.21	+1.2
3,472,280	+		Psest_3307	0.21	+3.2
3,472,280	+		Psest_3307	0.21	+2.9
3,472,280	+		Psest_3307	0.21	+3.4
3,472,280	+		Psest_3307	0.21	+1.8
3,472,280	+		Psest_3307	0.21	+2.1
3,472,280	+		Psest_3307	0.21	+1.3
3,472,280	+		Psest_3307	0.21	+1.7
3,472,286	+		Psest_3307	0.21	+2.2
3,472,286	+		Psest_3307	0.21	+2.1
3,472,286	+		Psest_3307	0.21	+1.5
3,472,286	+		Psest_3307	0.21	+1.3
3,472,286	+		Psest_3307	0.21	+3.1
3,472,332	+		Psest_3307	0.27	+1.3
3,472,424	+		Psest_3307	0.38	+0.4
3,472,424	+		Psest_3307	0.38	+1.1
3,472,428	+		Psest_3307	0.39	+3.9
3,472,428	+		Psest_3307	0.39	+2.4
3,472,428	+		Psest_3307	0.39	+0.7
3,472,852	-				+2.5
3,472,860	+				+3.7
3,472,861	-				+1.9
3,472,861	-				+3.7
3,472,861	-				+1.5
3,472,907	+				+2.3
3,473,012	+				+2.9
3,473,012	+				+2.8
3,473,013	-				+0.7
3,473,014	+				+1.9
3,473,014	+				+1.8
3,473,014	+				+1.8
3,473,014	+				+2.3
3,473,014	+				+2.9
3,473,014	+				+1.8
3,473,014	+				+2.2
3,473,015	-				+0.9
3,473,015	-				+1.3
3,473,015	-				+3.4