Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3245

Experiment: Neomycin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Neomycin 0.004 mg/ml
3,414,474	+				+0.0
3,414,518	-				+1.5
3,414,645	-				-0.3
3,414,645	-				-0.3
3,414,659	+				+0.1
3,414,671	+				-0.2
3,414,779	+				-2.8
3,414,779	+				+0.8
3,414,780	-				+0.9
3,414,781	+				-1.1
3,414,781	+				-1.8
3,414,781	+				+0.5
3,414,781	+				-0.4
3,414,781	+				+0.5
3,414,781	+				-1.5
3,414,781	+				+0.5
3,414,781	+				-1.5
3,414,781	+				-1.1
3,414,782	-				-1.4
3,414,782	-				-1.0
3,414,782	-				+1.1
3,414,782	-				-0.8
3,414,782	-				+0.5
3,414,782	-				+1.9
3,414,782	-				-0.7
3,414,782	-				-0.1
3,414,782	-				+2.1
3,414,782	-				+0.7
3,414,782	-				+0.6
3,414,937	-		Psest_3244	0.21	-0.9
3,415,014	+		Psest_3244	0.37	+0.4
3,415,015	-		Psest_3244	0.37	+0.8
3,415,015	-		Psest_3244	0.37	-0.1
3,415,033	+		Psest_3244	0.41	-0.3
3,415,033	+		Psest_3244	0.41	+1.3
3,415,132	+		Psest_3244	0.62	-0.1
3,415,269	+				-0.5
3,415,269	+				+1.2
3,415,269	+				-0.9
3,415,270	-				-3.1
3,415,270	-				+0.7
3,415,270	-				+0.6
3,415,272	-				+0.8
3,415,377	+				-0.5
3,415,441	-				-0.9
3,415,441	-				+1.5
3,415,441	-				-0.5
3,415,594	-		Psest_3245	0.34	+0.2
3,415,594	-		Psest_3245	0.34	-0.8
3,415,666	-		Psest_3245	0.49	-1.9
3,415,666	-		Psest_3245	0.49	+0.4
3,415,759	-		Psest_3245	0.69	-1.4
3,415,802	+		Psest_3245	0.78	-0.0
3,415,802	+		Psest_3245	0.78	-3.1
3,415,802	+		Psest_3245	0.78	-1.3
3,415,802	+		Psest_3245	0.78	-1.7
3,415,802	+		Psest_3245	0.78	-2.2
3,415,802	+		Psest_3245	0.78	+1.5
3,415,803	-		Psest_3245	0.78	-1.5
3,415,803	-		Psest_3245	0.78	-0.8
3,415,803	-		Psest_3245	0.78	-1.4
3,415,803	-		Psest_3245	0.78	-0.5
3,415,803	-		Psest_3245	0.78	-0.9
3,415,803	-		Psest_3245	0.78	-1.3
3,415,803	-		Psest_3245	0.78	+1.3
3,415,803	-		Psest_3245	0.78	+0.1
3,415,812	+		Psest_3245	0.80	-2.7
3,415,812	+		Psest_3245	0.80	-1.6
3,415,812	+		Psest_3245	0.80	+0.1
3,415,812	+		Psest_3245	0.80	-0.3
3,415,812	+		Psest_3245	0.80	+1.3
3,415,812	+		Psest_3245	0.80	-2.1
3,415,813	-		Psest_3245	0.80	+2.6
3,415,813	-		Psest_3245	0.80	-2.3
3,415,813	-		Psest_3245	0.80	-2.4
3,415,813	-		Psest_3245	0.80	-1.9
3,415,813	-		Psest_3245	0.80	+0.3
3,415,813	-		Psest_3245	0.80	+0.4
3,415,813	-		Psest_3245	0.80	-1.3
3,416,043	+				-1.6
3,416,080	+				+0.7
3,416,080	+				-0.6
3,416,080	+				-1.0
3,416,080	+				-0.6
3,416,080	+				+1.4
3,416,081	-				+0.5
3,416,081	-				+0.3
3,416,081	-				+1.6
3,416,081	-				-1.1
3,416,081	-				+2.2
3,416,081	-				-0.3
3,416,081	-				+0.5
3,416,081	-				+0.7
3,416,081	-				+0.4
3,416,081	-				+0.4
3,416,121	+				+0.0
3,416,317	-		Psest_3246	0.23	-0.5
3,416,477	+		Psest_3246	0.39	+1.1
3,416,477	+		Psest_3246	0.39	+3.1
3,416,477	+		Psest_3246	0.39	-0.5
3,416,478	-		Psest_3246	0.39	-0.4
3,416,481	-		Psest_3246	0.39	-0.1
3,416,867	+		Psest_3246	0.77	-0.8