Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3179

Experiment: Neomycin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Neomycin 0.004 mg/ml
3,350,430	+		Psest_3178	0.62	+2.1
3,350,675	+				+1.9
3,350,675	+				+1.1
3,350,675	+				+1.3
3,350,849	+				+1.2
3,350,929	+				+2.8
3,350,929	+				+1.6
3,350,972	+				+1.1
3,351,033	+				+1.1
3,351,035	+				+1.9
3,351,039	+				-0.0
3,351,039	+				+0.4
3,351,060	+				-2.0
3,351,689	-				-0.6
3,351,990	-		Psest_3180	0.25	-2.1
3,351,990	-		Psest_3180	0.25	+0.0
3,352,133	-		Psest_3180	0.34	-2.1
3,352,133	-		Psest_3180	0.34	-0.9
3,352,133	-		Psest_3180	0.34	-1.2
3,352,133	-		Psest_3180	0.34	+0.4
3,352,133	-		Psest_3180	0.34	+0.2
3,352,190	-		Psest_3180	0.38	-1.5
3,352,190	-		Psest_3180	0.38	+1.5
3,352,190	-		Psest_3180	0.38	-3.3
3,352,242	+		Psest_3180	0.42	-1.6
3,352,242	+		Psest_3180	0.42	-1.0
3,352,244	+		Psest_3180	0.42	-2.2
3,352,244	+		Psest_3180	0.42	-1.2
3,352,245	-		Psest_3180	0.42	-0.7
3,352,245	-		Psest_3180	0.42	-0.5
3,352,245	-		Psest_3180	0.42	-1.1
3,352,245	-		Psest_3180	0.42	+0.1
3,352,245	-		Psest_3180	0.42	+0.1
3,352,245	-		Psest_3180	0.42	-0.3
3,352,245	-		Psest_3180	0.42	+0.6
3,352,245	-		Psest_3180	0.42	-1.2
3,352,246	+		Psest_3180	0.42	-1.2
3,352,247	-		Psest_3180	0.42	+1.1
3,352,247	-		Psest_3180	0.42	-0.4
3,352,247	-		Psest_3180	0.42	-1.7
3,352,247	-		Psest_3180	0.42	-1.0
3,352,247	-		Psest_3180	0.42	+0.0
3,352,247	-		Psest_3180	0.42	-0.0
3,352,247	-		Psest_3180	0.42	-1.2
3,352,463	+		Psest_3180	0.57	-1.4
3,352,464	-		Psest_3180	0.57	+1.4
3,352,464	-		Psest_3180	0.57	-0.7
3,352,464	-		Psest_3180	0.57	+1.4
3,352,464	-		Psest_3180	0.57	-1.1
3,352,464	-		Psest_3180	0.57	-1.6
3,352,464	-		Psest_3180	0.57	+0.7
3,352,464	-		Psest_3180	0.57	-0.7
3,352,470	-		Psest_3180	0.57	+0.8
3,352,470	-		Psest_3180	0.57	+1.0
3,352,470	-		Psest_3180	0.57	-2.1
3,352,470	-		Psest_3180	0.57	+0.4
3,352,476	-		Psest_3180	0.58	-3.0
3,352,476	-		Psest_3180	0.58	-4.0