Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3176

Experiment: Neomycin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Neomycin 0.004 mg/ml
3,347,203	+		Psest_3174	0.74	+1.7
3,347,204	-		Psest_3174	0.74	+2.4
3,347,204	-		Psest_3174	0.74	+2.7
3,347,222	+		Psest_3174	0.75	+1.7
3,347,223	-		Psest_3174	0.75	+2.1
3,347,240	+		Psest_3174	0.76	+1.2
3,347,240	+		Psest_3174	0.76	+2.8
3,347,254	+		Psest_3174	0.77	+1.5
3,347,289	+		Psest_3174	0.80	+2.8
3,347,290	-		Psest_3174	0.80	+0.0
3,347,417	+		Psest_3174	0.89	+0.3
3,347,417	+		Psest_3174	0.89	+1.1
3,347,417	+		Psest_3174	0.89	+3.0
3,347,417	+		Psest_3174	0.89	-0.0
3,347,417	+		Psest_3174	0.89	+2.0
3,347,417	+		Psest_3174	0.89	+2.8
3,347,417	+		Psest_3174	0.89	+2.3
3,347,417	+		Psest_3174	0.89	-1.4
3,347,417	+		Psest_3174	0.89	+2.9
3,347,417	+		Psest_3174	0.89	+4.1
3,347,417	+		Psest_3174	0.89	+2.4
3,347,417	+		Psest_3174	0.89	+1.6
3,347,418	-		Psest_3174	0.89	+3.4
3,347,418	-		Psest_3174	0.89	+0.6
3,347,418	-		Psest_3174	0.89	+2.3
3,347,418	-		Psest_3174	0.89	+2.3
3,347,418	-		Psest_3174	0.89	+0.7
3,347,418	-		Psest_3174	0.89	-3.0
3,347,418	-		Psest_3174	0.89	+3.4
3,347,418	-		Psest_3174	0.89	-0.6
3,347,418	-		Psest_3174	0.89	+1.7
3,347,418	-		Psest_3174	0.89	+3.0
3,347,418	-		Psest_3174	0.89	-0.4
3,347,418	-		Psest_3174	0.89	-0.5
3,347,418	-		Psest_3174	0.89	+2.9
3,347,418	-		Psest_3174	0.89	+2.8
3,347,418	-		Psest_3174	0.89	+3.0
3,347,429	-		Psest_3174	0.89	+3.2
3,347,498	+				+2.3
3,347,498	+				+2.7
3,347,498	+				+1.7
3,347,498	+				+2.2
3,347,498	+				+0.9
3,347,498	+				+3.8
3,347,499	-				+2.2
3,347,537	+				+1.4
3,347,538	-				+1.5
3,347,538	-				-0.6
3,347,590	+				-1.0
3,347,590	+				-0.0
3,347,591	-				+0.5
3,347,598	+				-0.9
3,347,664	+				+0.4
3,347,664	+				+0.9
3,347,664	+				+1.9
3,347,664	+				-1.8
3,347,664	+				-0.7
3,347,706	+				-1.4
3,347,706	+				+1.1
3,347,706	+				+0.6
3,347,707	-				+0.6
3,347,707	-				+1.5
3,347,728	-				-0.4
3,347,787	+				-0.8
3,347,871	+				-1.2
3,347,872	-				-0.0
3,347,872	-				+0.6
3,347,873	+				-0.5
3,347,873	+				-1.1
3,347,874	-				-0.4
3,347,874	-				-0.4
3,347,899	-				-2.1
3,347,899	-				-1.8
3,347,983	-		Psest_3175	0.37	-1.8
3,348,120	+				+0.6
3,348,449	+		Psest_3176	0.17	+0.0
3,348,500	+		Psest_3176	0.20	-1.1
3,348,682	+		Psest_3176	0.33	-0.8
3,348,684	+		Psest_3176	0.33	-0.3
3,348,684	+		Psest_3176	0.33	-0.6
3,348,768	+		Psest_3176	0.38	-1.3
3,348,957	+		Psest_3176	0.51	-2.8
3,348,958	-		Psest_3176	0.51	-0.4
3,349,081	+		Psest_3176	0.60	-0.4
3,349,260	+		Psest_3176	0.72	+0.5
3,349,336	+		Psest_3176	0.77	+0.5
3,349,336	+		Psest_3176	0.77	-0.1
3,349,336	+		Psest_3176	0.77	+2.0
3,349,337	-		Psest_3176	0.77	+0.0
3,349,340	+		Psest_3176	0.77	-0.4
3,349,386	+		Psest_3176	0.80	-0.9
3,349,451	+		Psest_3176	0.85	+0.0
3,349,827	+		Psest_3177	0.71	+1.3
3,349,827	+		Psest_3177	0.71	+2.0
3,349,828	-		Psest_3177	0.72	-0.6
3,349,930	-				-2.2
3,349,930	-				+1.3
3,349,990	+		Psest_3178	0.10	+1.7
3,350,093	+		Psest_3178	0.22	+1.7
3,350,093	+		Psest_3178	0.22	+2.7
3,350,093	+		Psest_3178	0.22	+1.2
3,350,093	+		Psest_3178	0.22	-0.5
3,350,094	-		Psest_3178	0.22	-1.3
3,350,430	+		Psest_3178	0.62	+2.1
3,350,675	+				+1.9
3,350,675	+				+1.1
3,350,675	+				+1.3