Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3045

Experiment: Neomycin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Neomycin 0.004 mg/ml
3,226,729	+				+0.7
3,226,729	+				+1.2
3,226,730	-				+1.1
3,226,730	-				-1.0
3,226,730	-				-0.8
3,226,860	+				+2.4
3,226,861	-				+0.6
3,226,861	-				+0.8
3,226,881	+		Psest_3044	0.10	+2.6
3,226,944	+		Psest_3044	0.21	+0.2
3,226,944	+		Psest_3044	0.21	+0.2
3,226,944	+		Psest_3044	0.21	-0.6
3,226,944	+		Psest_3044	0.21	+0.6
3,226,945	-		Psest_3044	0.22	+1.6
3,226,945	-		Psest_3044	0.22	+0.1
3,226,945	-		Psest_3044	0.22	+0.8
3,226,945	-		Psest_3044	0.22	+1.0
3,226,945	-		Psest_3044	0.22	+1.1
3,226,945	-		Psest_3044	0.22	+1.5
3,226,945	-		Psest_3044	0.22	+0.5
3,227,049	+		Psest_3044	0.40	+0.8
3,227,050	-		Psest_3044	0.40	+0.8
3,227,050	-		Psest_3044	0.40	+0.8
3,227,050	-		Psest_3044	0.40	+0.6
3,227,100	+		Psest_3044	0.49	-0.4
3,227,100	+		Psest_3044	0.49	+1.3
3,227,101	-		Psest_3044	0.49	+0.9
3,227,257	-		Psest_3044	0.77	-1.4
3,227,262	+		Psest_3044	0.77	+0.7
3,227,405	+				-0.6
3,227,406	-				+1.2
3,227,439	-				+0.5
3,227,467	-				+1.4
3,227,532	+				+1.7
3,227,532	+				+1.1
3,227,533	-				+1.1
3,227,560	+				+1.4
3,227,560	+				+2.4
3,227,561	-				+2.7
3,227,566	+				+3.8
3,227,602	+				+1.9
3,227,602	+				+2.4
3,227,603	-				+1.7
3,227,603	-				+3.6
3,227,610	+				+0.7
3,227,611	-				+3.0
3,227,611	-				+3.3
3,227,626	+				+1.9
3,227,642	-				+0.8
3,227,688	-				+1.5
3,227,746	+		Psest_3045	0.12	+4.1
3,227,811	+		Psest_3045	0.43	+0.2
3,227,812	-		Psest_3045	0.44	+4.8
3,227,812	-		Psest_3045	0.44	+0.9
3,227,923	+				+1.5
3,227,927	+				+2.0
3,227,928	-				-0.6
3,227,928	-				+2.7