Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2997

Experiment: Neomycin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Neomycin 0.004 mg/ml
3,186,276	+		Psest_2996	0.12	-0.4
3,186,448	+		Psest_2996	0.32	+0.0
3,186,448	+		Psest_2996	0.32	-0.2
3,186,448	+		Psest_2996	0.32	+1.3
3,186,449	-		Psest_2996	0.33	-2.1
3,186,449	-		Psest_2996	0.33	-1.7
3,186,449	-		Psest_2996	0.33	+1.6
3,186,449	-		Psest_2996	0.33	+0.3
3,186,456	+		Psest_2996	0.33	-1.5
3,186,456	+		Psest_2996	0.33	+0.3
3,186,527	+		Psest_2996	0.42	+0.7
3,186,527	+		Psest_2996	0.42	+0.8
3,186,527	+		Psest_2996	0.42	-0.1
3,186,527	+		Psest_2996	0.42	+0.3
3,186,527	+		Psest_2996	0.42	+0.3
3,186,527	+		Psest_2996	0.42	-3.0
3,186,527	+		Psest_2996	0.42	+0.7
3,186,527	+		Psest_2996	0.42	+1.3
3,186,528	-		Psest_2996	0.42	-0.4
3,186,528	-		Psest_2996	0.42	+0.4
3,186,528	-		Psest_2996	0.42	-0.1
3,186,528	-		Psest_2996	0.42	+0.6
3,186,528	-		Psest_2996	0.42	-0.7
3,186,531	+		Psest_2996	0.42	-0.5
3,186,531	+		Psest_2996	0.42	+0.5
3,186,531	+		Psest_2996	0.42	+0.5
3,186,531	+		Psest_2996	0.42	-1.0
3,186,531	+		Psest_2996	0.42	+0.2
3,186,531	+		Psest_2996	0.42	+0.4
3,186,532	-		Psest_2996	0.42	+0.5
3,186,532	-		Psest_2996	0.42	-0.3
3,186,532	-		Psest_2996	0.42	+0.9
3,186,532	-		Psest_2996	0.42	+1.5
3,186,532	-		Psest_2996	0.42	-1.7
3,186,733	+		Psest_2996	0.66	-1.5
3,186,733	+		Psest_2996	0.66	-0.3
3,186,733	+		Psest_2996	0.66	-0.9
3,186,734	-		Psest_2996	0.66	+0.0
3,186,761	+		Psest_2996	0.69	-0.5
3,186,762	-		Psest_2996	0.70	+0.7
3,186,762	-		Psest_2996	0.70	+0.5
3,186,762	-		Psest_2996	0.70	-0.5
3,186,762	-		Psest_2996	0.70	+0.2
3,186,763	+		Psest_2996	0.70	+0.2
3,186,763	+		Psest_2996	0.70	-1.8
3,186,763	+		Psest_2996	0.70	-1.9
3,186,763	+		Psest_2996	0.70	+1.3
3,186,763	+		Psest_2996	0.70	+0.6
3,186,763	+		Psest_2996	0.70	+0.8
3,186,763	+		Psest_2996	0.70	+0.5
3,186,763	+		Psest_2996	0.70	+1.3
3,186,763	+		Psest_2996	0.70	-1.0
3,186,763	+		Psest_2996	0.70	+0.4
3,186,763	+		Psest_2996	0.70	-0.3
3,186,763	+		Psest_2996	0.70	-1.4
3,186,764	-		Psest_2996	0.70	-0.4
3,186,764	-		Psest_2996	0.70	-0.9
3,186,764	-		Psest_2996	0.70	-0.7
3,186,764	-		Psest_2996	0.70	+0.9
3,186,764	-		Psest_2996	0.70	-2.8
3,186,764	-		Psest_2996	0.70	-0.4
3,186,764	-		Psest_2996	0.70	-0.0
3,186,764	-		Psest_2996	0.70	-1.4
3,186,764	-		Psest_2996	0.70	+0.4
3,186,764	-		Psest_2996	0.70	-0.7
3,186,764	-		Psest_2996	0.70	-1.3
3,186,764	-		Psest_2996	0.70	-1.8
3,187,075	+				-0.8
3,187,076	-				+0.3
3,187,096	-				+0.3
3,187,101	+				+0.1
3,187,209	-				-0.9
3,187,549	-		Psest_2997	0.26	-0.4
3,187,549	-		Psest_2997	0.26	+0.9
3,187,551	+		Psest_2997	0.27	-1.5
3,187,551	+		Psest_2997	0.27	-1.8
3,187,551	+		Psest_2997	0.27	-0.4
3,187,552	-		Psest_2997	0.27	-2.0
3,187,552	-		Psest_2997	0.27	-0.9
3,187,552	-		Psest_2997	0.27	-0.3
3,187,552	-		Psest_2997	0.27	+0.7
3,187,552	-		Psest_2997	0.27	-1.1
3,187,594	+		Psest_2997	0.30	-1.1
3,187,595	-		Psest_2997	0.30	+0.3
3,187,596	+		Psest_2997	0.30	-0.6
3,187,596	+		Psest_2997	0.30	+1.9
3,187,596	+		Psest_2997	0.30	+0.9
3,187,596	+		Psest_2997	0.30	-0.5
3,187,596	+		Psest_2997	0.30	-1.7
3,187,596	+		Psest_2997	0.30	-0.6
3,187,596	+		Psest_2997	0.30	-1.5
3,187,596	+		Psest_2997	0.30	+0.3
3,187,596	+		Psest_2997	0.30	+1.7
3,187,596	+		Psest_2997	0.30	-1.0
3,187,596	+		Psest_2997	0.30	+0.3
3,187,596	+		Psest_2997	0.30	+1.7
3,187,596	+		Psest_2997	0.30	+0.3
3,187,596	+		Psest_2997	0.30	-1.8
3,187,596	+		Psest_2997	0.30	-1.8
3,187,596	+		Psest_2997	0.30	+1.0
3,187,596	+		Psest_2997	0.30	+0.7
3,187,597	-		Psest_2997	0.30	-0.1
3,187,597	-		Psest_2997	0.30	-0.8
3,187,597	-		Psest_2997	0.30	+0.6
3,187,597	-		Psest_2997	0.30	-2.3
3,187,597	-		Psest_2997	0.30	+0.2
3,187,597	-		Psest_2997	0.30	-1.3
3,187,597	-		Psest_2997	0.30	+0.5
3,187,597	-		Psest_2997	0.30	+1.0
3,187,624	-		Psest_2997	0.32	-2.8
3,187,659	+		Psest_2997	0.35	-0.6
3,187,720	+		Psest_2997	0.40	-0.2
3,187,831	+		Psest_2997	0.49	-1.1
3,187,832	-		Psest_2997	0.49	-0.3
3,187,832	-		Psest_2997	0.49	-0.9
3,187,908	+		Psest_2997	0.55	+0.6
3,187,909	-		Psest_2997	0.55	-1.3
3,187,909	-		Psest_2997	0.55	+0.9
3,187,926	-		Psest_2997	0.56	-0.1
3,187,971	+		Psest_2997	0.60	-0.5
3,187,971	+		Psest_2997	0.60	-0.5
3,187,972	-		Psest_2997	0.60	+0.1
3,188,052	+		Psest_2997	0.66	+1.2
3,188,176	-		Psest_2997	0.76	-1.3
3,188,176	-		Psest_2997	0.76	-1.5
3,188,193	+		Psest_2997	0.77	+0.4
3,188,194	-		Psest_2997	0.78	-1.5
3,188,194	-		Psest_2997	0.78	-0.8
3,188,355	+				+0.1
3,188,361	+				-0.3
3,188,361	+				-0.7
3,188,361	+				+0.0
3,188,361	+				-2.1
3,188,362	-				-0.8
3,188,362	-				+1.3
3,188,365	+				+0.6
3,188,365	+				-1.8
3,188,365	+				-0.7
3,188,366	-				-0.5
3,188,366	-				+0.3
3,188,415	+				-0.9
3,188,415	+				-0.4
3,188,415	+				-2.2
3,188,415	+				+0.3
3,188,415	+				-1.2
3,188,415	+				-0.8
3,188,416	-				-2.3
3,188,416	-				-0.4
3,188,416	-				-1.5
3,188,416	-				-2.3
3,188,416	-				-0.8
3,188,416	-				-2.0
3,188,416	-				-0.5
3,188,416	-				-0.4
3,188,416	-				-0.5
3,188,416	-				+0.9
3,188,419	-				+0.0
3,188,427	+				-0.6
3,188,427	+				-0.7
3,188,467	-				-1.3
3,188,476	-				+0.3
3,188,476	-				-0.8
3,188,480	+				-2.8
3,188,480	+				+1.3
3,188,480	+				+1.1
3,188,480	+				-0.3
3,188,480	+				+0.5
3,188,480	+				-0.5
3,188,481	-				-0.1
3,188,481	-				-2.5
3,188,491	+				-2.1
3,188,491	+				+0.1
3,188,491	+				-0.8
3,188,491	+				-0.9
3,188,491	+				+0.4
3,188,492	-				-0.7
3,188,492	-				-1.4
3,188,492	-				+0.6
3,188,626	+		Psest_2998	0.19	-0.7
3,188,626	+		Psest_2998	0.19	+2.0
3,188,626	+		Psest_2998	0.19	-2.1
3,188,626	+		Psest_2998	0.19	+0.3
3,188,626	+		Psest_2998	0.19	+0.1
3,188,626	+		Psest_2998	0.19	-0.6
3,188,626	+		Psest_2998	0.19	+0.8
3,188,626	+		Psest_2998	0.19	+1.0
3,188,626	+		Psest_2998	0.19	+1.1
3,188,626	+		Psest_2998	0.19	+1.0
3,188,626	+		Psest_2998	0.19	-2.1
3,188,626	+		Psest_2998	0.19	-2.9
3,188,626	+		Psest_2998	0.19	-1.4
3,188,626	+		Psest_2998	0.19	+1.9
3,188,626	+		Psest_2998	0.19	+0.3
3,188,627	-		Psest_2998	0.19	+0.1
3,188,627	-		Psest_2998	0.19	-0.5
3,188,627	-		Psest_2998	0.19	+0.0
3,188,627	-		Psest_2998	0.19	+0.0
3,188,627	-		Psest_2998	0.19	-0.9
3,188,627	-		Psest_2998	0.19	-0.6
3,188,627	-		Psest_2998	0.19	+0.1
3,188,627	-		Psest_2998	0.19	-1.6
3,188,627	-		Psest_2998	0.19	-0.2
3,188,627	-		Psest_2998	0.19	-0.2
3,188,627	-		Psest_2998	0.19	-1.0
3,188,627	-		Psest_2998	0.19	-0.6
3,188,627	-		Psest_2998	0.19	+0.2
3,188,627	-		Psest_2998	0.19	-1.0
3,188,627	-		Psest_2998	0.19	+0.3
3,188,627	-		Psest_2998	0.19	+0.6
3,188,627	-		Psest_2998	0.19	-0.3
3,188,627	-		Psest_2998	0.19	+0.4
3,188,627	-		Psest_2998	0.19	-1.4
3,188,743	+		Psest_2998	0.40	+1.9
3,188,744	-		Psest_2998	0.40	-0.9
3,188,752	+		Psest_2998	0.42	+0.1
3,188,753	-		Psest_2998	0.42	-0.6
3,188,842	+		Psest_2998	0.58	+0.5
3,188,852	-		Psest_2998	0.60	-1.8
3,188,910	+		Psest_2998	0.70	-0.2
3,188,910	+		Psest_2998	0.70	-0.6
3,188,911	-		Psest_2998	0.71	-0.4
3,189,066	-				+1.6
3,189,066	-				-1.7
3,189,103	+				-2.1
3,189,181	+				+0.4
3,189,181	+				-0.5
3,189,181	+				+1.0
3,189,181	+				-0.7
3,189,255	-		Psest_2999	0.14	-1.3
3,189,296	+		Psest_2999	0.19	-1.8
3,189,296	+		Psest_2999	0.19	+0.8
3,189,296	+		Psest_2999	0.19	+0.5
3,189,409	+		Psest_2999	0.33	+0.8