Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2853

Experiment: Neomycin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Neomycin 0.004 mg/ml
3,043,646	+				-0.8
3,043,646	+				-0.7
3,043,647	-				+1.2
3,043,647	-				+0.3
3,043,826	+		Psest_2852	0.20	+0.2
3,043,826	+		Psest_2852	0.20	+0.8
3,043,826	+		Psest_2852	0.20	+0.1
3,043,826	+		Psest_2852	0.20	+1.0
3,043,827	-		Psest_2852	0.20	-1.0
3,043,827	-		Psest_2852	0.20	-0.4
3,044,112	-		Psest_2852	0.82	+0.1
3,044,112	-		Psest_2852	0.82	+0.2
3,044,115	+		Psest_2852	0.82	+1.5
3,044,115	+		Psest_2852	0.82	-1.0
3,044,190	+				-2.6
3,044,190	+				-1.7
3,044,190	+				+2.2
3,044,191	-				-2.1
3,044,191	-				+0.2
3,044,310	+				-0.6
3,044,310	+				+0.9
3,044,310	+				+0.7
3,044,310	+				-0.6
3,044,310	+				+1.0
3,044,310	+				+0.9
3,044,310	+				-0.3
3,044,310	+				+0.2
3,044,310	+				+0.2
3,044,310	+				+0.6
3,044,310	+				-1.3
3,044,310	+				+1.0
3,044,310	+				-0.1
3,044,310	+				+1.0
3,044,310	+				-0.0
3,044,310	+				+0.0
3,044,310	+				+0.5
3,044,310	+				+0.9
3,044,310	+				+0.6
3,044,310	+				+1.0
3,044,310	+				+0.1
3,044,310	+				-0.7
3,044,310	+				-1.5
3,044,310	+				+3.6
3,044,310	+				+1.7
3,044,310	+				+0.0
3,044,310	+				+0.2
3,044,310	+				+0.2
3,044,311	-				+0.9
3,044,311	-				+0.9
3,044,311	-				-1.6
3,044,311	-				+1.3
3,044,311	-				+0.0
3,044,311	-				+1.0
3,044,311	-				-1.3
3,044,311	-				+0.3
3,044,311	-				+1.1
3,044,311	-				+0.4
3,044,311	-				-0.6
3,044,311	-				+0.2
3,044,311	-				-0.7
3,044,311	-				+0.1
3,044,311	-				-0.9
3,044,311	-				-0.7
3,044,311	-				+0.8
3,044,311	-				-0.4
3,044,311	-				-0.9
3,044,311	-				-0.5
3,044,311	-				+1.0
3,044,311	-				+1.6
3,044,311	-				-0.6
3,044,311	-				+0.4
3,044,311	-				+0.6
3,044,311	-				+0.0
3,044,311	-				-0.3
3,044,311	-				-0.2
3,044,311	-				-0.3
3,044,311	-				-0.1
3,044,311	-				-0.3
3,044,311	-				-0.7
3,044,311	-				-0.4
3,044,311	-				-0.9
3,044,311	-				+0.1
3,044,314	+				+1.5
3,044,314	+				+1.3
3,044,314	+				+0.4
3,044,314	+				-1.3
3,044,314	+				-0.2
3,044,314	+				+1.6
3,044,315	-				+1.3
3,044,315	-				-0.1
3,044,315	-				+1.2
3,044,315	-				-0.4
3,044,315	-				-1.8
3,044,315	-				+0.5
3,044,315	-				-0.9
3,044,349	+				-0.7
3,044,350	-				+0.6
3,044,350	-				+0.7
3,044,368	+				+0.2
3,044,368	+				+0.0
3,044,368	+				-0.5
3,044,369	-				-0.5
3,044,369	-				+0.1
3,044,369	-				-0.9
3,044,369	-				+1.0
3,044,378	+				+0.0
3,044,378	+				+2.1
3,044,378	+				+1.8
3,044,378	+				-0.3
3,044,378	+				+0.5
3,044,378	+				-3.1
3,044,378	+				-1.0
3,044,378	+				+1.2
3,044,378	+				+0.4
3,044,378	+				+0.5
3,044,378	+				-1.7
3,044,378	+				-0.3
3,044,378	+				-0.0
3,044,378	+				+0.5
3,044,378	+				+1.3
3,044,379	-				-0.1
3,044,379	-				-1.1
3,044,379	-				-2.7
3,044,379	-				+1.4
3,044,379	-				-0.1
3,044,379	-				+1.3
3,044,379	-				-0.8
3,044,379	-				-0.7
3,044,379	-				+0.1
3,044,379	-				-0.2
3,044,379	-				-1.3
3,044,379	-				+0.5
3,044,379	-				+0.9
3,044,379	-				+1.3
3,044,379	-				-1.8
3,044,379	-				-2.1
3,044,379	-				+1.2
3,044,379	-				-2.0
3,044,379	-				+1.6
3,044,379	-				+0.7
3,044,379	-				-0.6
3,044,382	+				+1.6
3,044,383	-				+0.3
3,044,504	+		Psest_2853	0.60	+0.9
3,044,505	-		Psest_2853	0.60	+0.8
3,044,505	-		Psest_2853	0.60	+0.8
3,044,505	-		Psest_2853	0.60	-0.4
3,044,505	-		Psest_2853	0.60	+2.3
3,044,505	-		Psest_2853	0.60	+0.7
3,044,505	-		Psest_2853	0.60	+1.5
3,044,747	+				+1.4
3,044,777	-				-2.5
3,044,777	-				-0.3
3,044,777	-				+2.0
3,044,781	-				+1.2
3,044,781	-				+1.2
3,044,781	-				+1.3
3,044,781	-				+0.1
3,044,781	-				-0.5
3,045,482	+				+1.7
3,045,498	+				+0.8
3,045,531	+				-0.0