Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2811

Experiment: Neomycin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Neomycin 0.004 mg/ml
2,998,893	+		Psest_2809	0.68	-0.4
2,998,893	+		Psest_2809	0.68	+1.8
2,998,931	+		Psest_2809	0.74	+1.5
2,998,931	+		Psest_2809	0.74	+1.6
2,999,035	+		Psest_2809	0.89	-1.3
2,999,035	+		Psest_2809	0.89	-0.1
2,999,036	-		Psest_2809	0.89	+0.1
2,999,188	-		Psest_2810	0.11	+1.6
2,999,188	-		Psest_2810	0.11	+1.7
2,999,191	+		Psest_2810	0.11	+1.8
2,999,191	+		Psest_2810	0.11	-1.7
2,999,192	-		Psest_2810	0.11	-0.7
2,999,264	-		Psest_2810	0.21	+1.7
2,999,393	+		Psest_2810	0.38	+1.0
2,999,393	+		Psest_2810	0.38	+0.7
2,999,393	+		Psest_2810	0.38	+1.3
2,999,482	-		Psest_2810	0.50	+2.9
2,999,604	-		Psest_2810	0.66	+1.2
2,999,604	-		Psest_2810	0.66	+2.5
2,999,604	-		Psest_2810	0.66	+0.6
2,999,798	-				+0.7
2,999,821	+				+1.3
2,999,821	+				+1.3
2,999,822	-				+3.0
2,999,822	-				+1.6
2,999,822	-				+1.9
2,999,849	+				+2.6
2,999,850	-				-0.9
3,000,084	-		Psest_2811	0.22	+0.0
3,000,273	-		Psest_2811	0.40	+1.6
3,000,273	-		Psest_2811	0.40	+1.7
3,000,273	-		Psest_2811	0.40	+0.3
3,000,278	-		Psest_2811	0.41	+1.3
3,000,288	+		Psest_2811	0.42	+0.9
3,000,288	+		Psest_2811	0.42	+0.0
3,000,288	+		Psest_2811	0.42	+0.8
3,000,288	+		Psest_2811	0.42	+1.3
3,000,288	+		Psest_2811	0.42	+1.0
3,000,289	-		Psest_2811	0.42	-0.4
3,000,289	-		Psest_2811	0.42	+0.9
3,000,289	-		Psest_2811	0.42	+0.6
3,000,289	-		Psest_2811	0.42	+0.9
3,000,289	-		Psest_2811	0.42	+1.8
3,000,289	-		Psest_2811	0.42	+0.0
3,000,289	-		Psest_2811	0.42	+1.0
3,000,292	+		Psest_2811	0.42	-0.3
3,000,292	+		Psest_2811	0.42	+2.6
3,000,293	-		Psest_2811	0.42	+0.3
3,000,357	+		Psest_2811	0.48	+1.4
3,000,414	+		Psest_2811	0.54	+0.7
3,000,414	+		Psest_2811	0.54	+0.2
3,000,414	+		Psest_2811	0.54	+1.4
3,000,415	-		Psest_2811	0.54	+1.2
3,000,669	+		Psest_2811	0.78	-0.0
3,000,669	+		Psest_2811	0.78	+2.7
3,000,670	-		Psest_2811	0.78	+0.3
3,000,837	-				+0.3
3,001,366	-				-0.7
3,001,366	-				+1.3
3,001,366	-				-1.7
3,001,366	-				+2.5
3,001,366	-				-1.5
3,001,366	-				+2.0
3,001,366	-				+0.6
3,001,366	-				-0.9
3,001,366	-				+0.3
3,001,366	-				-0.3
3,001,366	-				+1.0
3,001,366	-				-0.2
3,001,366	-				-0.0
3,001,366	-				-1.0
3,001,403	+				+2.6
3,001,403	+				+0.2
3,001,404	-				+1.5
3,001,509	-				+0.3
3,001,511	-				+0.3
3,001,530	+				-0.3
3,001,530	+				+1.2
3,001,531	-				-1.3
3,001,531	-				+3.0
3,001,637	+		Psest_2813	0.29	+0.0
3,001,674	+		Psest_2813	0.41	+0.1
3,001,674	+		Psest_2813	0.41	-0.7
3,001,674	+		Psest_2813	0.41	-0.3
3,001,674	+		Psest_2813	0.41	+2.6
3,001,674	+		Psest_2813	0.41	+0.6
3,001,674	+		Psest_2813	0.41	+1.2
3,001,674	+		Psest_2813	0.41	+0.2
3,001,674	+		Psest_2813	0.41	-0.7
3,001,674	+		Psest_2813	0.41	+0.1
3,001,674	+		Psest_2813	0.41	-0.0
3,001,675	-		Psest_2813	0.41	-0.6
3,001,675	-		Psest_2813	0.41	-0.6
3,001,675	-		Psest_2813	0.41	-1.5
3,001,675	-		Psest_2813	0.41	-0.8
3,001,675	-		Psest_2813	0.41	-1.2
3,001,675	-		Psest_2813	0.41	-0.8
3,001,675	-		Psest_2813	0.41	-2.3
3,001,675	-		Psest_2813	0.41	-0.5
3,001,675	-		Psest_2813	0.41	-0.6
3,001,675	-		Psest_2813	0.41	+1.1
3,001,675	-		Psest_2813	0.41	+0.1
3,001,675	-		Psest_2813	0.41	-1.0
3,001,675	-		Psest_2813	0.41	-0.8
3,001,890	+				-1.1